Basic Information

Insect: Notodonta dromedarius
Gene Symbol: -
Assembly: GCA_905147325.1
Location: LR990187.1:2592836-2600517[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3.2 2.2e+02 2.8 0.8 1 23 345 367 345 367 0.92

2 13 0.16 11 6.9 0.9 1 20 426 445 426 447 0.94

3 13 4.1 2.8e+02 2.5 0.4 2 23 459 481 458 481 0.92

4 13 0.46 31 5.5 0.4 2 13 519 530 518 538 0.82

5 13 0.048 3.2 8.6 2.0 1 23 779 801 779 801 0.94

6 13 1.9 1.3e+02 3.6 0.3 2 23 807 828 806 828 0.96

7 13 0.012 0.79 10.5 2.5 3 23 939 959 938 959 0.96

8 13 2.8e-05 0.0019 18.8 1.6 2 23 975 996 974 996 0.96

9 13 1.7e-07 1.2e-05 25.7 1.4 1 23 1002 1024 1002 1024 0.98

10 13 0.00013 0.0086 16.7 0.3 2 23 1030 1051 1029 1051 0.96

11 13 0.00056 0.038 14.7 0.5 2 23 1058 1080 1057 1080 0.96

12 13 3.4 2.3e+02 2.8 2.3 1 19 1088 1106 1088 1107 0.86

13 13 0.00018 0.012 16.2 0.2 3 19 1120 1136 1119 1138 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3.2	2.2e+02	2.8	0.8	1	23	345	367	345	367	0.92
2	13	0.16	11	6.9	0.9	1	20	426	445	426	447	0.94
3	13	4.1	2.8e+02	2.5	0.4	2	23	459	481	458	481	0.92
4	13	0.46	31	5.5	0.4	2	13	519	530	518	538	0.82
5	13	0.048	3.2	8.6	2.0	1	23	779	801	779	801	0.94
6	13	1.9	1.3e+02	3.6	0.3	2	23	807	828	806	828	0.96
7	13	0.012	0.79	10.5	2.5	3	23	939	959	938	959	0.96
8	13	2.8e-05	0.0019	18.8	1.6	2	23	975	996	974	996	0.96
9	13	1.7e-07	1.2e-05	25.7	1.4	1	23	1002	1024	1002	1024	0.98
10	13	0.00013	0.0086	16.7	0.3	2	23	1030	1051	1029	1051	0.96
11	13	0.00056	0.038	14.7	0.5	2	23	1058	1080	1057	1080	0.96
12	13	3.4	2.3e+02	2.8	2.3	1	19	1088	1106	1088	1107	0.86
13	13	0.00018	0.012	16.2	0.2	3	19	1120	1136	1119	1138	0.97

Sequence Information

Coding Sequence: ATGTCCACGAATAGTAATATGAAACAAAAACCACGGAAAACTAAGTTAGTGCCGCGAACGTGCGTGGAAAACGAGGAGGAAGACAACACGAAGAAGCAGATGCCCTCAATAAAAATTGTGGATGTGAAGACGGTGGAAGCAGAGTCCTTTGATACTCCTCAAAGCAAATCAGCTATAAAGACTTATCTATCTAGAGTCCTACAAGCCAAGGTTAAAGCAAATGCTGCCACAGAATCTGAGACTTCACAATCTCATGTCACAATACCTGGTACTACAAAATCCAGAGAATTTTCTACAATTGGAGTCTCACAATTCAAGACTCCAGAAACCCAGACATCCAATATACCGTTCCGTATATCTGTGGATGTGGAAGTAGAAGAGTTTGATGACGATGACCGCTTACAGATTGATGAAAGTGGTTTTGAGGAAAAAGAAATTAAAATGGAGGTAGACGAGACAGATGTAGAAAACAACAAGGAGAAGAAATCACATGATATCCTCAACTTTCAGAACATAGTTGTTAAAAAGGAGAGAATATCTCCCGATAGGGAAATGGAATCAGAAGCTGATAATACAGAAATACAGATAGAATCACTATCGCATGTGGTCATAAAAACTGAAAAAGATGATATAACTATAAATCACACCGACAATTACGTTAATTCAAATGAAAATAATATTCATTCCAACCACAAAAATGTAAATTCCAACCAGAATAATGTAAACACGAATCAGTTTCATGACAACAAAGTATTTTCAGGTGTACTGACCGACATACAGACGTCAAACAATCCAAAAACATTAAACCAGTATACGGTCACTGAAACACAAATATTAACAGTTTCCGAGAAAATACTGGCAACCTCAACAAACTTAGCTGATAAAATCTTAGCCATTGAAGCAAGAAATATTATCGGCAGCATAGCTAAAGAACCGACGTCTGAGGACAATATGATGGAGAATAAAATACAATATGCATTAGACGATTGGAAGAACTGGACCGCCGGGAGCCAGAGACCACCTCCACTTCTTTACAAATGCTATGTCTGCTCGCGATCGTGGTGGTACCTCTCCGAGTTCAGGGAACACTTACGTGACCATGTCGAACTAAATATAAAAGTTTCAGTCGAAGAAACATCCGTTGAAGAGTGCAACATCATAGCTTACACGGATATGGTGCCTGAAATATTAGACCTGGACCCCACAGGCTTGTGTTGGAGATGCGAAAAAGACTACAGCGTCCATAAACTAAGTAATAGACAGTCAGAATGTTATTACCAATGTGGAGTGTGTTTGAAACTGTTTTATTCGTGTGCTGCATTGAAAAGTCACGAGTATACCAGTCCGGAGTGTTTGAAACACATTGGAACGTTAAAATGTTATATCTGTCCCAATTTATCTCGTATCCCCGGGGAGCGTAAAAGACATATGCAGAGACAGCATTCAGTTCGCACCGACTTGCCGATACCTACTTCGTACAAGCGTTGCAACGATTGCGGATCGAAATATTTCATTTACAACATGCACAACTGTAGGGTCAGAATCTGCGGCAGTCAATGCAATTACTGCTTCAGGAAGTTCAGGCATAGATTGCTGTCTGAACTGCATATGGCTCTCGGTAATCCAAGATTCAAGTGCCGGATTTGCAACCTCGAGTTGGCAAGAAAGTGCATGGAGTTGGAACATGTTCTGATGCATTCCACAGCTTTCATATTTGCATACAAGTGTTTTACGTGTGAAGATTTGAATGTATATTTGGATGAGGAGACGGGTCTTCAACACCGGTACATCGTACATAAACAGAAAATTGATAAGAAGAGAAATTACTTCAATAAGGTGCTGGTGCCTATATCATGTATTCTGCCGAATTACGAGAGTCCTGCCAATCAGTTGCAACAAACTGCTAGTACTGTCAATGCATCAATGCAGAGCATACCAGAACTATTGGTGCCGCAGGTACCGGCAATAAAATTGGAGGTCATAGACAATGAGCAGGTGGAAATCAAAGTGGAGCGTGAGGAGCTAATCATTGAAGATGACAACCTCTCCGACGAGGAGTACGAGGATGACATAATAAGATTGAACTACGACCAATTATACCGCGACGCTAACAGGAAACAGCCGAAAATATACAGCTGTAGGAAGTGCGAGTTTCGTGGCCTACATAGAGATTATAAGGAACATTTGCAAACGAAATGCGGACGAATAGCCACCGTGATGAAGGACCCTAAGGTGTATTCGTGCCATAAATGCAACTTTCAAGGCCACCATTCAGTTTACATGGAGCATTTGAAGACGGATTGCTCAAAACATTTGTACATAAATGAAGATGTTTACACTTGTACAAAGTGTGATACAACTTTTGATTCGATCAAACGATATCTGGCTCATTTCTCGTCACATCGCTACCATTACCAACAGTGTCCGGTCTGTATGATGGACTACCAGAGTTTCTCCACATTGATAATACATTTCAACAGTCATATAAGACAGAGCTATTATAAAATGTATTCGATACAATCGAACGATGATGCATCTCAGAAGAGCAATCAAATTAGTTTGTGCAAAACCTGCTCTAAAGAAGTGCCTTACAACAAAAGATTCGTGCACTGGGAGAGGCATTTGATACTGAAAGACTCGGACAAGAGTCAAGTTATGATAGCCAACATGGTGGTGAACGATAACGGTGATGATGAAGGCAACGATGGTGAATGCATACCCACGCTTAATGAAAATAATTGTGCATTGTTGACATCGGAGATGTTAGGACAATTAATTGAAACCCTTCAATGCGACAAGAAGCGGGTACGCGACTGCCCACAATGCTACCGCAGTTTCACCCGCAACAATGACTGTAAGCGCCACATCATTGAGCATTTACTAAGCGACGCCTACTCCAAATGGCGGATATGCTGCTCGCTGCAGTGTCAAATATGCGGGCAAAAGTTCAAAAAGGCCGACAGGTATAAGCGACACATGCGCGATCACGGCTGCCTCCCGATATTCCAGTGCGACGTATGCGACAAGGCGTTTAGTGATTCCAGCAATTTCACGAAACACAAAAAGGTCCATAACATGAAAGTGTTGGTATGCGACCTCTGCAATAAGAAGTTTCAAGCGAAGGCGTCGCTTGAGAAACATATGTTGATGCACCAAATGTCAAAGCCGATTTCGTGCGATATCTGCGTGCGAGAATTCCCCACGGACACTCTATACCGCCGGCACATGCGTACGAAACACGATAACACATTGAAACGAAACTACAGCTGTCTCATATGCAAGGAGAGATTCTACACGTGTAAGGAGAAATGGGAGCACTCCTGGGAGGTGCACAAGGAGAGGAAGTATAAGGCCGACTGCCCACAGTGCGGGAAGTCGTTCCGTACCTACATGGCCTTAAGGAGACACGACAGGTCCAATATGTGTGTTCAAATGGAAGTGAACAGTGATAACAAAGATCCAGTCATAAAAACCAAAACGTTTCGTTTTGACAACAGTATTGTGGTATATGTTAATAAAAGTGATTGCAGTTATGTGAAATTGTCGTGA
Protein Sequence: MSTNSNMKQKPRKTKLVPRTCVENEEEDNTKKQMPSIKIVDVKTVEAESFDTPQSKSAIKTYLSRVLQAKVKANAATESETSQSHVTIPGTTKSREFSTIGVSQFKTPETQTSNIPFRISVDVEVEEFDDDDRLQIDESGFEEKEIKMEVDETDVENNKEKKSHDILNFQNIVVKKERISPDREMESEADNTEIQIESLSHVVIKTEKDDITINHTDNYVNSNENNIHSNHKNVNSNQNNVNTNQFHDNKVFSGVLTDIQTSNNPKTLNQYTVTETQILTVSEKILATSTNLADKILAIEARNIIGSIAKEPTSEDNMMENKIQYALDDWKNWTAGSQRPPPLLYKCYVCSRSWWYLSEFREHLRDHVELNIKVSVEETSVEECNIIAYTDMVPEILDLDPTGLCWRCEKDYSVHKLSNRQSECYYQCGVCLKLFYSCAALKSHEYTSPECLKHIGTLKCYICPNLSRIPGERKRHMQRQHSVRTDLPIPTSYKRCNDCGSKYFIYNMHNCRVRICGSQCNYCFRKFRHRLLSELHMALGNPRFKCRICNLELARKCMELEHVLMHSTAFIFAYKCFTCEDLNVYLDEETGLQHRYIVHKQKIDKKRNYFNKVLVPISCILPNYESPANQLQQTASTVNASMQSIPELLVPQVPAIKLEVIDNEQVEIKVEREELIIEDDNLSDEEYEDDIIRLNYDQLYRDANRKQPKIYSCRKCEFRGLHRDYKEHLQTKCGRIATVMKDPKVYSCHKCNFQGHHSVYMEHLKTDCSKHLYINEDVYTCTKCDTTFDSIKRYLAHFSSHRYHYQQCPVCMMDYQSFSTLIIHFNSHIRQSYYKMYSIQSNDDASQKSNQISLCKTCSKEVPYNKRFVHWERHLILKDSDKSQVMIANMVVNDNGDDEGNDGECIPTLNENNCALLTSEMLGQLIETLQCDKKRVRDCPQCYRSFTRNNDCKRHIIEHLLSDAYSKWRICCSLQCQICGQKFKKADRYKRHMRDHGCLPIFQCDVCDKAFSDSSNFTKHKKVHNMKVLVCDLCNKKFQAKASLEKHMLMHQMSKPISCDICVREFPTDTLYRRHMRTKHDNTLKRNYSCLICKERFYTCKEKWEHSWEVHKERKYKADCPQCGKSFRTYMALRRHDRSNMCVQMEVNSDNKDPVIKTKTFRFDNSIVVYVNKSDCSYVKLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -