Basic Information

Insect: Notodonta dromedarius
Gene Symbol: -
Assembly: GCA_905147325.1
Location: LR990187.1:510650-535631[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3.8e-05 0.0025 18.4 0.6 1 23 23 45 23 45 0.97

2 16 0.005 0.34 11.7 5.6 1 23 51 73 51 73 0.98

3 16 0.00037 0.025 15.3 4.5 1 23 79 101 79 101 0.99

4 16 6.7e-06 0.00046 20.7 0.2 1 23 107 129 107 129 0.98

5 16 0.00066 0.045 14.5 3.3 1 23 135 157 135 157 0.98

6 16 0.0078 0.53 11.1 3.4 1 23 164 187 164 187 0.94

7 16 0.00013 0.0088 16.7 0.8 1 23 195 218 195 218 0.97

8 16 5.1e-05 0.0035 18.0 2.4 2 23 225 246 224 246 0.96

9 16 2.3e-06 0.00016 22.2 1.9 1 23 252 276 252 276 0.98

10 16 0.088 5.9 7.8 0.6 1 23 282 304 282 304 0.93

11 16 0.002 0.13 13.0 1.2 2 23 315 337 315 337 0.97

12 16 0.0073 0.49 11.2 0.6 1 23 344 367 344 367 0.96

13 16 0.011 0.78 10.6 4.1 2 23 374 396 373 396 0.94

14 16 0.53 36 5.3 8.0 1 23 1001 1023 1001 1023 0.91

15 16 0.59 40 5.2 1.4 2 23 1034 1054 1033 1054 0.88

16 16 0.00087 0.059 14.1 0.8 1 23 1179 1201 1179 1201 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3.8e-05	0.0025	18.4	0.6	1	23	23	45	23	45	0.97
2	16	0.005	0.34	11.7	5.6	1	23	51	73	51	73	0.98
3	16	0.00037	0.025	15.3	4.5	1	23	79	101	79	101	0.99
4	16	6.7e-06	0.00046	20.7	0.2	1	23	107	129	107	129	0.98
5	16	0.00066	0.045	14.5	3.3	1	23	135	157	135	157	0.98
6	16	0.0078	0.53	11.1	3.4	1	23	164	187	164	187	0.94
7	16	0.00013	0.0088	16.7	0.8	1	23	195	218	195	218	0.97
8	16	5.1e-05	0.0035	18.0	2.4	2	23	225	246	224	246	0.96
9	16	2.3e-06	0.00016	22.2	1.9	1	23	252	276	252	276	0.98
10	16	0.088	5.9	7.8	0.6	1	23	282	304	282	304	0.93
11	16	0.002	0.13	13.0	1.2	2	23	315	337	315	337	0.97
12	16	0.0073	0.49	11.2	0.6	1	23	344	367	344	367	0.96
13	16	0.011	0.78	10.6	4.1	2	23	374	396	373	396	0.94
14	16	0.53	36	5.3	8.0	1	23	1001	1023	1001	1023	0.91
15	16	0.59	40	5.2	1.4	2	23	1034	1054	1033	1054	0.88
16	16	0.00087	0.059	14.1	0.8	1	23	1179	1201	1179	1201	0.97

Sequence Information

Coding Sequence: ATGAGTGAACAGATGAAGAGTTCATGTACAAACAGCAGACATGTTGGTGAAGAAGAAAAGCCGGTTTACAACTGTCCATATTGTAGCAAGGTGTTTAGGGACCCCTCCTCCTGGTCGCTCCACAAGAAACTCCACACCTCCACGGAGCTGTTCCGGTGCCAGCTGTGTTCCTACACGTGTCGGGTGAAGAAGTACCTCGCCCGGCACATGAAGTACCACCGCCCCCCCACCAAGTACACGTGCGAGATCTGCGGGAAAGCTTTCCACTTTAGATGCAAGATGGAAAGCCATATGAGGGTTCACACCAAGGAGAAGCCTTTCGTCTGTGCGGTGTGCGACAAAGCATTCAGTTCGAGCTACACACTCTCTGGACACATGTTGACACACACTGACCAGAAGCCGTTTCAGTGTTCGTTCTGTGAGTATGCCTGCAGAGACAGCTCCACGCTCAGGAAGCACGTGGAACGCCATATTGGAGCCAGCAAGGTGTATGAATGTCAAATCTGTAATAAGAGTTACAAATGTAAATGGCAACTGAAAACCCATCTAGAGGAAAAACACTTCGGCGTGGAGCCGCAGAGGTACCCCTGCCAGCTGTGCGACAAACTGTTCAAGAGCAAATACAACGTGGACAAACACATAAAATCGGTGCACGAGAAATCGTTGTCGTGCGAGTGCGATGTTTGCGGGCACGTCATCAGTAATAAATCAAATTTGGTTCAGCACATGAAGCGTCATGTGGACGTGTCTCCATACAAGTGCACGTTCACCAACTGCGGAAGACGGTTTAAGGACAAGGGCGACCTCCGGCGGCATTTGATCACGCACAGCCCGGCGCGGCAGCACGCGTGCGGCGCGTGCGGGCGGCTGTTCGCGCGCCGCCGCCGCCTCGCGCGACACGCGCAGCAGCACATAGCGCACGCAGCGCGCGCGCGCACCGCAGAGTGCCCGCACTGCGGTGTGCTTTTCTACAGCAAAAATTATCTCCTCCTCCACATAAAGAAGAAACATGACAGAAAAAGAAACAAGTTCATTTGTGATTTGTGCGATTTTACAACTTCCAACAAGCCGAGTCTGGTGATGCACCTGAAGTACAGACATTGCGCACGAGGGGACATAAAATGCCAAATTTGCAACAAAGAATATAAGAAATTTGAATGTTTGAAGAGACACTATCTGAACTCGCACAACGTATTGTACAATACGTTAATAAAAGAGCCAGAGAGTACCTCAGTTGAGGTCAAAGAAGAACCGGACGATGAAGAAGTCGTTGAGTATCATCCTGAAATCGATTTACTTGAAATACATAAAGAAGAACTCATAGAACCAGAATATTCAGATCCTATAATATACTCGGAAACAGTTTTGTCTGAAGATGTATCACGCAGTATTATGCAGAGAGATAAAAGGAGGTTAGGCGAACCGGAGAACGAGTTCGATAGCTTATTTATCGACCATATCATAGAGAACCCGGATAAAACTGTGGTGAAGTTCGATAAATGTAAAGAAGAGGGACGTGGGGTCAATAGTCGAGAGAGTTCAGTGGAAATTGATGTGGAGAAGTTGGATAAATACGAGGATGGTCAAGATGCAAGTAGTGTCGAAGAATCCGACGATAGTCTGGAGGAATCTGATAACTATTGCTTGGAAGACCCAGGAATAAATAGTATAGAGAACTCGGGTGAGAATATTCTTGAAAATTTTGTGAAACCAGTGAAAATTTTTGTGGAGAAATTGGATCAAAATACTATCGAGAATGCGGTGAAAATGAATGCAAGGAAATTGGGTTCTAACATCGCAAAAAAGTCGGCAAAAGTTACTGTAGAGAAGCTGGACATAGACAATTTAAGGAATAATAGTGTTAAGAAGATAAGTGTATCGAAACCCAAGAAAAACAATACAAAATATAATAGCTTGATTAAAAATAAAAATTTGAAAGTTTGTGTTGAAAAACTGGATGTAAATCGTTACAAGAAATTACGCAAGATTGGCATGAGGAAGATGAATAAAAATACTGTGAAGAAGATTCGTGTAAAACAATCCGATAGAAGTTACGTGGTGAACATAAATAAAAACGATTTAGCGAGGAGAAATAGTATAAAGAGACGTAAGAAGAGAGGAGTTAAGCCAGTGAAGGATTTATATATAAAACATAACAAGAGTGTTGAATCAACCCCCGAACCAGACATAACTGATTACTCTAAGAGTGTTTTTTCTGAAGATATATCGCGCTGCTTGCAAGAGAGGGTCGGCAGAGTGCCCGGCGAGCCGGAGAACAGACTGGAGAGCATTTTCATCGATCATTATATGGAGAAGGCTGATAATAACCCCTCGTCGGAGCAGGAGTGGGAGGTGTCGGCGTACTCCCGGCGCGTGCTGTCGGAGGACGTGTCGCGCAGCGTGATGCGGCGCGACCGGCGCGTGGCGGGCGACCCGCAGGCCGACATCGACCGGCTCTTCATTGATCACGTCATGGAGAAGCCCGATAAACACAGTGTTGAATTGGTGAAACAGAACATCGATACTCAGAAAGAGAAATACGTGAAGAAATGCGTCGAGAAAATGTTGCAACGGAGCAGAGCGAAGAGTGAGGCGGCTGTATTGGAGGAAACGAGACGGAAATACAATGAGCGGATCAATGAATTGTCTACCAAGTCGAATAAGAAAGACCATGTGAATATAAAATACTTTAAAAATAAAAGTACTGAAGCAGTAAATGATAATATCGATACTGGAGATGATGGAAATGATGAAGAAATTGATGATCAAATAGTACAAATTGATGCTGGTGATGTAATAAATGATGAAAACGATGCAAGAATTGACGATGAAACGGAAGACAATTATAATAATGATACAAATGATGAACAAATAGTACAAAATAATGGGATAACTGATGATCAAATAGCAGATAATGATAATACTGATACGAAAGATGATGAACAAATCAGTGATGATGAAGGAATCAAGAGGAAGAATAACAAAATAAATTTCAACACACATCAATGCTATATATGTTTTGAATTGTTCAAAACAAAATCAGACTTAACACACCATTGTAAGGAGCATTTTCAAATATGCAACCTGAAAATGCTGAAAAAGTGTCCATATTGCGGGTACGTCACCAATTTCGATATGAAAAGACACTTAAAACTCAAACACGACGTCAAAGTGGACTTATTTAACGCTCAGATCACTGAAACACACGATGAAGAGGGATCTAAGTACTATTTACAAACACAACAGTGCAAACTAGAAGTAATACCGAGCATAAATAATTTAAATAGGAAAGCGTACATGAAAATCGATGAAATGAATCGATTAAATAAGAATACTGAAATAACCACAGCTAAGATAGTGAAGAACGGCACAGAATGGGTTGTGGCTAAGGACATTTTGAGGATAACCAACGAGTTTCAGCTACCAGAGTTTAGTACTGAAGAGTACATGTCTTTGAATATATCCGGTGATAAATACGAAGATATGTTGAAAAAGTTGAGTTTTTTGGCAAAGAAACGCGGTTTGAAGATGTTGTTCCCGTGCAACGAGTGTGATAAGGTATGTCGCAAGATGAGCGGGCTGGTTTTACATAATAGAGTACACGAGGCGAACCCCAAGCCTTTTAAACGCAAAGTATGGAAAGGTAAGGCTCTTAAACATAGAAATGTAAATAAACATGAACAAAGGAACAGGGTGAAAGTAATAACTAGGGTCAGACATAGCGAAAATTACAAAGAGTTCGTTGAAAATCAGATTAAAAGGAGTAGAATGAAAACTTTACATGTTGAAGATATTGCCGGTACGACCAGTAATGTTGCCAGCGACGAAAAATTAAGTGTGAATAATGGAAGATTGGCAGAGAATCGTTTTGCTGAGCCGAAACCGATAGAACATAATCACAAATGCGATAAAGAGTTGATGGAGTTCTACAAAAGCAACATTAAAGGTGGCGATGTGGAGTTCTGGCAGTTTTTGAAGATTTTCAACAAGATGAGTCGCGAAAATGTCAATGATTTTGATGATTTGGAGTCTAGAACCGATTTTGGTATACATATTAATGATGCCACTGTCTCTGGCAATACTGAGAATGAGAATAATGTAAATTCTGATAATGGCAACATTAAATCGGGAAACAGTGAAGAGGGTGGCAACACAAGTTCTGAAATTGAAATTGATAGCAACATTGGAAAGATGAAAATGAATAAAAACGTTTGCAAAAGGGTGCTTATGATAAGTAAACGAGAGAGACAAAGACGGGAGGCTATCAAACACGAATTAAGGAAAAGGATAGAATGCGATAATGTTGAAGCCTAA
Protein Sequence: MSEQMKSSCTNSRHVGEEEKPVYNCPYCSKVFRDPSSWSLHKKLHTSTELFRCQLCSYTCRVKKYLARHMKYHRPPTKYTCEICGKAFHFRCKMESHMRVHTKEKPFVCAVCDKAFSSSYTLSGHMLTHTDQKPFQCSFCEYACRDSSTLRKHVERHIGASKVYECQICNKSYKCKWQLKTHLEEKHFGVEPQRYPCQLCDKLFKSKYNVDKHIKSVHEKSLSCECDVCGHVISNKSNLVQHMKRHVDVSPYKCTFTNCGRRFKDKGDLRRHLITHSPARQHACGACGRLFARRRRLARHAQQHIAHAARARTAECPHCGVLFYSKNYLLLHIKKKHDRKRNKFICDLCDFTTSNKPSLVMHLKYRHCARGDIKCQICNKEYKKFECLKRHYLNSHNVLYNTLIKEPESTSVEVKEEPDDEEVVEYHPEIDLLEIHKEELIEPEYSDPIIYSETVLSEDVSRSIMQRDKRRLGEPENEFDSLFIDHIIENPDKTVVKFDKCKEEGRGVNSRESSVEIDVEKLDKYEDGQDASSVEESDDSLEESDNYCLEDPGINSIENSGENILENFVKPVKIFVEKLDQNTIENAVKMNARKLGSNIAKKSAKVTVEKLDIDNLRNNSVKKISVSKPKKNNTKYNSLIKNKNLKVCVEKLDVNRYKKLRKIGMRKMNKNTVKKIRVKQSDRSYVVNINKNDLARRNSIKRRKKRGVKPVKDLYIKHNKSVESTPEPDITDYSKSVFSEDISRCLQERVGRVPGEPENRLESIFIDHYMEKADNNPSSEQEWEVSAYSRRVLSEDVSRSVMRRDRRVAGDPQADIDRLFIDHVMEKPDKHSVELVKQNIDTQKEKYVKKCVEKMLQRSRAKSEAAVLEETRRKYNERINELSTKSNKKDHVNIKYFKNKSTEAVNDNIDTGDDGNDEEIDDQIVQIDAGDVINDENDARIDDETEDNYNNDTNDEQIVQNNGITDDQIADNDNTDTKDDEQISDDEGIKRKNNKINFNTHQCYICFELFKTKSDLTHHCKEHFQICNLKMLKKCPYCGYVTNFDMKRHLKLKHDVKVDLFNAQITETHDEEGSKYYLQTQQCKLEVIPSINNLNRKAYMKIDEMNRLNKNTEITTAKIVKNGTEWVVAKDILRITNEFQLPEFSTEEYMSLNISGDKYEDMLKKLSFLAKKRGLKMLFPCNECDKVCRKMSGLVLHNRVHEANPKPFKRKVWKGKALKHRNVNKHEQRNRVKVITRVRHSENYKEFVENQIKRSRMKTLHVEDIAGTTSNVASDEKLSVNNGRLAENRFAEPKPIEHNHKCDKELMEFYKSNIKGGDVEFWQFLKIFNKMSRENVNDFDDLESRTDFGIHINDATVSGNTENENNVNSDNGNIKSGNSEEGGNTSSEIEIDSNIGKMKMNKNVCKRVLMISKRERQRREAIKHELRKRIECDNVEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -