Ndro004591.1
Basic Information
- Insect
- Notodonta dromedarius
- Gene Symbol
- ZFY
- Assembly
- GCA_905147325.1
- Location
- LR990188.1:358272-362576[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.0029 0.2 12.4 0.1 3 20 133 150 132 152 0.90 2 18 0.0041 0.27 12.0 0.4 3 23 185 206 184 206 0.91 3 18 0.0013 0.091 13.5 4.1 1 20 210 229 210 232 0.95 4 18 1.7 1.2e+02 3.7 6.6 1 21 235 255 235 256 0.95 5 18 0.00013 0.0091 16.6 0.1 1 23 268 291 268 291 0.95 6 18 8.3e-05 0.0056 17.3 2.0 1 23 297 319 297 319 0.98 7 18 1.1 76 4.3 0.2 5 23 329 347 327 347 0.96 8 18 0.21 14 6.6 1.6 1 23 353 375 353 376 0.95 9 18 0.00013 0.0086 16.7 0.8 2 22 500 520 499 523 0.90 10 18 0.097 6.6 7.6 0.0 3 23 527 548 525 548 0.96 11 18 0.00076 0.051 14.3 1.6 3 23 555 576 553 576 0.96 12 18 0.004 0.27 12.0 1.0 1 23 581 603 581 603 0.87 13 18 0.41 28 5.7 1.9 2 20 607 625 607 627 0.93 14 18 1.6e-06 0.00011 22.6 0.7 1 23 653 676 653 676 0.95 15 18 0.00027 0.018 15.7 0.5 1 23 682 704 682 704 0.95 16 18 0.018 1.2 9.9 0.1 1 23 710 732 710 732 0.98 17 18 0.0032 0.21 12.3 0.3 1 23 738 761 738 761 0.94 18 18 2.5e-05 0.0017 18.9 0.8 2 23 768 790 767 790 0.95
Sequence Information
- Coding Sequence
- ATGTGTGGACGTTGCGATAAACTGTGCCACCTCAAGTCTTACGGACAACATTTGAAAACTCATAAATTGTACGTGGTGGCGACGGAAGTCCTTTTGCCCACCGGAATGTGCCGAGCCTGTTCCGAAGCCGTCATCGCGGCCGCCACCATCAGGAACCTGTGCGCACAGTCTTTCGAGTGCTGGGACAACGCGACGTCCCACCTCTCACAGATCGATGAACCGTCTGAAGACGATAGAACTTACTTCATATTCTACAACGAGGAAAGGACAATAATAAAAGATCAGATTGATAGAACACCATCGGTTGATGATGCCTTAGAAATGCTCAATCGCAAATATAAAGAGAAGCCGAATCGCCGCAGGCGCATCAAACGCGATCGCAATTTGCCCGGCGCCTGTCCGACGTGCGGAAAACAGTTTTCGTCACCCGAATATTTGAATTTTCACTTGAAGGCTACGTTGAGCCGTGCGTGTGAGGAATGCGGCGTGGTTATGCCTAAACAGAAGCTGGCGAAGCATTACAACTTCGACCACGAGATAGAAGTAGTTGATTGTGACATGTGTCATGTTATTTTCTACGATCAGGACTCGCTAAAACAGCACTGGACGGAGGCTCACATGACTCCTCACTCTTGCACGTACTGCGGACACGGATTCCCAAATTCGAGAGCATTAAGAGCTCACATGTATTGTCACTCGCTATTCCACTGCAAATCTTGCAATCTAAGCTTCGATAACTTGAAATGTTTCAGATACCATCAAAAACAGTGCAAAGTGGTCGAAAGACCAGCGTATAATAACTTCATTTGTGACGACTGCGGCGCGGCGTACGATCGTAAACCCTCCCTGCGTATACATATGATCCAAAAGCATTTGAACGTGCTGCCGTACGTTTGCGAAGTGTGCAGCAAGCGAACATCGACGTTAGCGCATTTGAAATCACACGAGAAAACTCATAAAACCGAAAGGAAGGTATACCAATGTTATTGTGGCGCAAAATTGCGTACAGAGATTGGTTATCAGTTACATCAGAGGATACACACTGGCGAGCGGCCGTACCAGTGTGAGGCATGCGGGGAAAGGTTCCTGTCGTCTTCCAGAAGGCTGGACCACATCAAGAGACACCACAGAGGAGCGGCAGACATGCCACATGCTTGTGAACAGTGTGCGGCAAAGTTTATAAGAGAAGAATCTCTGGTCCCGATCGGCGCGTGCGTCAGCTGCGCCACGACAGCGCTCGCTGCGCAAGAGTTCAGAATTTTTGTGAAAAACTCTGAAAAGGTTTGGCAAAAAGCCATCGACAACATGTCACTTATCGCCGCCGCCCCACCGACCAAATCCATAGTTGCCGTCGTAAAATCCACAGATTTGTCTATTCAAACTTTGAAAGATTTAAAGAAAACTGATCCCAAGAATCTAATTAATAGACTCAAAAACAAAACTCCTAAGAAGATCGGCGATAAAAAGCTCCGAGGAGCCCGATCTGGCCCGTCCTGCGTCTGTCCCGACTGCGAGAAAAACTTCATAAGCCCTTTTTACCTAAACATGCATTTACGGAACAGTGGGCATAAAGACGCATGTACAATTTGCGGCGAAATCGTCGTCCGAGGCGACGGCATGAAGCAGCATTTAGCCACAGTTCATAAACAAACCACGGTTATATGTAATCATTGTCCTACCCTCTGTGCGAATCAGGCCGAGTTAAAAAAACATATCAAAAGAGCTCACAAAGCAGGGGTCTTCACGTGTAGAGACTGCGGAAGAACGTTTCCGAGGAGAGCGTCATTCGATTTTCACGCCCAAATGCATGCAGTCAGGACTTGTAGGACTTGCGAGGCTCAGTTCACGAACCGGAGCTGTTACAGGGAGCATAGGGCCAATTGCGAGCCGGACGCGAAGCCCCAAACAAAAACGGTGCCTCGTAACCGCCGCTCGAACATTCGCGACCCTGCCACCTTCACTTGCGACCATTGCGGGAAGACATACATATCTAGGGCTCAACTTAAAAATCATATAATATGGATACATATGGACATAAGGCCGCATCAGTGCCAGTGGTGTGGCAAGAGATTCTATACACCGGCGCGACTCGCCGAGCATACGGTGGTGCATACGCGCGTCAGGAATTTCGAGTGTGACATTTGTGGTGTAAAACTAGTCTCCAAAATGGCGGTAGTGTACCACAGGCGGCGGCATACGGGGGAGAAACCTTACGAATGCGAAGATTGCGGGGAAAAGTTCATTTCGGCCTCCCGTAGGTCTGAACACGCGAAGCGTAGGCACAATAAGGGGTTAAAATTGCCATGCCTGAAATGCCCGGCCAGTTTCGTTAGGAAACATGAGCTGAAGAAGCATATGGAGAAGGCTCATAGGAGTCCGCCCGAAACTGTTCTAGGATGGTGA
- Protein Sequence
- MCGRCDKLCHLKSYGQHLKTHKLYVVATEVLLPTGMCRACSEAVIAAATIRNLCAQSFECWDNATSHLSQIDEPSEDDRTYFIFYNEERTIIKDQIDRTPSVDDALEMLNRKYKEKPNRRRRIKRDRNLPGACPTCGKQFSSPEYLNFHLKATLSRACEECGVVMPKQKLAKHYNFDHEIEVVDCDMCHVIFYDQDSLKQHWTEAHMTPHSCTYCGHGFPNSRALRAHMYCHSLFHCKSCNLSFDNLKCFRYHQKQCKVVERPAYNNFICDDCGAAYDRKPSLRIHMIQKHLNVLPYVCEVCSKRTSTLAHLKSHEKTHKTERKVYQCYCGAKLRTEIGYQLHQRIHTGERPYQCEACGERFLSSSRRLDHIKRHHRGAADMPHACEQCAAKFIREESLVPIGACVSCATTALAAQEFRIFVKNSEKVWQKAIDNMSLIAAAPPTKSIVAVVKSTDLSIQTLKDLKKTDPKNLINRLKNKTPKKIGDKKLRGARSGPSCVCPDCEKNFISPFYLNMHLRNSGHKDACTICGEIVVRGDGMKQHLATVHKQTTVICNHCPTLCANQAELKKHIKRAHKAGVFTCRDCGRTFPRRASFDFHAQMHAVRTCRTCEAQFTNRSCYREHRANCEPDAKPQTKTVPRNRRSNIRDPATFTCDHCGKTYISRAQLKNHIIWIHMDIRPHQCQWCGKRFYTPARLAEHTVVHTRVRNFECDICGVKLVSKMAVVYHRRRHTGEKPYECEDCGEKFISASRRSEHAKRRHNKGLKLPCLKCPASFVRKHELKKHMEKAHRSPPETVLGW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00622184;
- 90% Identity
- -
- 80% Identity
- -