Basic Information

Gene Symbol
NCOR1
Assembly
GCA_905147325.1
Location
LR990179.1:5240432-5260412[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-07 0.00015 22.1 0.0 1 43 640 682 640 684 0.96

Sequence Information

Coding Sequence
ATGTGCAATGAGCGGAGCGGCCTACGGTCGAACCACTGCGCCAAGCGGTCGTCAAAAGTTAATGAATTGATTGTAACGTTTGATTGTGTTGCGCAGGCTGTGTCCGCGCACGCGGTGCTGGCGCACCTGGGCGCGGCCGTGCCGTACCCGCTGTACAACCAGCCGCAGGACACGGCGCTGTACCACGAGAACATCCGCCGCCACCGCTCGCTGCGCAGGCGCCTCGCGCACCACATCCGCAAGCTCAAGCTCGAGGCGGAGAAGGCGCCTCGCGCACCACATCCGCAAGCTCAAGCTCGAGGCGGAGAAGGTGAGTCCGCCCCGTACCCGCTGTACAACCAGCCGCAGGACACGGCGCTGTACCACGAGAACATCCGCCGCCACCGCTCGCTGCGCAGGCGCCTCGCGCACCACATCCGCAAGCTCAAGCTCGAGGCGGAGAAGGCGCCTCGCGCACCACATCCGCAAGCTCAAGCTCGAGGCGGAGAAGGTGAGTCCGCCCCGTACCCGCTGTACAACCAGCCGCAGGACACGGCGCTGTACCACGAGAACATCCGCCGCCACCGCTCGCTGCGCAGGCGCCTCGCGCACCACATCCGCAAGCTCAAGCTCGAGGCGGAGAAGGCGCCTCGCGCACCACATCCGCAAGCTCAAGCTCGAGGCGGAGAAGGTGAGTCCGCCCCGTACCCGCTGTACAACCAGCCGCAGGACACGGCGCTGTACCACGAGAACATCCGCCGCCACCGCTCGCTGCGCAGGCGCCTCGCGCACCACATCCGCAAGCTCAAGCTCGAGGCGGAGAAGGCGCCTCGCGCACCACATCCGCAAGCTCAAGCTCGAGGCGGAGAAGGTGAGTCCGCCCCGTACCCGCTGTACAACCAGCCGCAGGACACGGCGCTGTACCACGAGAACATCCGCCGCCACCGCTCGCTGCGCAGGCGCCTCGCGCACCACATCCGCAAGCTCAAGCTCGAGGCGGAGAAGCGGGAGGACGCCCTGGCGGAGGCGTACAGTCAGCGCGCGGCCGAGTGGCTGCGGCGCGTGGAGCGGATCGAGCAGGGCCAGAAGAGGAAGGCCAAGGACGCGAGGAACCGGGAGTTCTTCGAAAAGGCATTAGCCTTAATAAAACCACTAGATGCCAGCAACGTCAACGAAGAACATTTAGAAATGGATACTGACATCAATAAAGAATCAAGGACAGATGCTGAAAATCAGGTGTTCCCGGAGCTGCGCAAGCAGCGCGAGGAGCGCGAGCGGTTCAACCGACTGGGCGCGCGCGTCAAGTCGGAGGCCGAGCTGGAGGAGATCGCGGACGGGCTGCACGAGCAGGAGCACGAGGACAAGAAGATGCGCTCGCTCACCGTGGTGCCGCCGCTGCTGCGCGACCCCGCCGACGCCGCGCCGCTCTACATCGATACCAACCGTAACTACCCACCCACCTACCTACCCACCAGCACATACACGCTACTGCACGAGCAGGAGCACGAGGACAAGAAGATGCGCTCGCTCACCGTGGTGCCGCCGCTGCTGCGCGACCCCGCCGACGCCGCGCCGCTCTACATCGATACCAACCGTAACTACCCACCCACCTACCTACCCACCAGCACATACACGCTACTGCACGAGCAGGAGCACGAGGACAAGAAGATGCGCTCGCTCACCGTGGTGCCGCCGCTGCTGCGCGACCCCGCCGACGCCGCGCCGCTCTACATCGATACCAACCGTAACTACCCACCCACCTACCTACCCACCAGCACATACACGCTACTGCACGAGCAGGAGCACGAGGACAAGAAGATGCGCTCGCTCACCGTGGTGCCGCCGCTGCTGCGCGACCCCGCCGACGCCGCGCCGCTCTACATCGATACCAACCGTCGGTGCATGGACATGGAGGCGGAGCACAAGGAGCTCCAGCTACGGAACGTATGGTCGCGGCCCGAGCGCGAGCTGTTCAAGGAGAAGTACCTCCAGCACCCCAAGAACTTCGGCCAGATCGCCTCCTTTCTACCCAGGAAGAGCGTCCGGGATTGCGTCAGATTCTACTACCTGTCAAAGAAGGCGGAGAGTTATAAGCAGCTGCTGCGCAAGCCGCGGCAGCGGCGCTCGGCGCGCAACCCGCCGCGCGCCGCGCCGGAGCCCGAGCTCACCGCCGGGGTCACCACGCGTCTGCAGCGCTCGCAGGGTACCGGCCCGCGCGTGGCTGGCGGCGAGGCGAAGGAGCCGAGCCTGGAGGAGGCGGCGCCCGACCCCTCCTGCATCCCCGTGCCGCCGCTGCCCGCGCCCGCGCCCGCCCCCGCCCCCGCCCCCGCGCAGCCCGCCGCGCCCGCGCAGCCGCAGAGGTCGGAGTTGACACGAACGCCGCCGCTGCCGCCGTCGCCGCCGCCGGCGTCATCGGCGCCGCCCGCGCCGGTGACGTCGACGCCGACTCCGCTCAGCGTGGCCAACAGCCCGGCGGCCGCGCCCACGCCGCCCGCGCCCGACATGATCACCGTCACCACCACAGCGGACCTGACCATCATCACCATCACCCCTATTACGACGGCATCAACAACGACAGAGTCGACAACGCCGACGACTTCAACGACGACAGTGACGTCATCAACCGGATGCGCGACCGTGTCGGCGTTAACGCCAGGTGGCGGCAGCGCGCCGCCCACGCCGCAGCCCGCCCAGCCACCCACGCCCACGCAGCCGCCGCCCACGCCGGAGACAGGTATGTTGGGTACAATTTTACTGGGACAGCTTATTCATGTCCACTGCTGGACATAA
Protein Sequence
MCNERSGLRSNHCAKRSSKVNELIVTFDCVAQAVSAHAVLAHLGAAVPYPLYNQPQDTALYHENIRRHRSLRRRLAHHIRKLKLEAEKAPRAPHPQAQARGGEGESAPYPLYNQPQDTALYHENIRRHRSLRRRLAHHIRKLKLEAEKAPRAPHPQAQARGGEGESAPYPLYNQPQDTALYHENIRRHRSLRRRLAHHIRKLKLEAEKAPRAPHPQAQARGGEGESAPYPLYNQPQDTALYHENIRRHRSLRRRLAHHIRKLKLEAEKAPRAPHPQAQARGGEGESAPYPLYNQPQDTALYHENIRRHRSLRRRLAHHIRKLKLEAEKREDALAEAYSQRAAEWLRRVERIEQGQKRKAKDARNREFFEKALALIKPLDASNVNEEHLEMDTDINKESRTDAENQVFPELRKQREERERFNRLGARVKSEAELEEIADGLHEQEHEDKKMRSLTVVPPLLRDPADAAPLYIDTNRNYPPTYLPTSTYTLLHEQEHEDKKMRSLTVVPPLLRDPADAAPLYIDTNRNYPPTYLPTSTYTLLHEQEHEDKKMRSLTVVPPLLRDPADAAPLYIDTNRNYPPTYLPTSTYTLLHEQEHEDKKMRSLTVVPPLLRDPADAAPLYIDTNRRCMDMEAEHKELQLRNVWSRPERELFKEKYLQHPKNFGQIASFLPRKSVRDCVRFYYLSKKAESYKQLLRKPRQRRSARNPPRAAPEPELTAGVTTRLQRSQGTGPRVAGGEAKEPSLEEAAPDPSCIPVPPLPAPAPAPAPAPAQPAAPAQPQRSELTRTPPLPPSPPPASSAPPAPVTSTPTPLSVANSPAAAPTPPAPDMITVTTTADLTIITITPITTASTTTESTTPTTSTTTVTSSTGCATVSALTPGGGSAPPTPQPAQPPTPTQPPPTPETGMLGTILLGQLIHVHCWT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-