Basic Information

Gene Symbol
-
Assembly
GCA_905147325.1
Location
LR990182.1:4342749-4345115[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 2.7 3.8e+03 -1.7 0.0 22 33 235 247 233 251 0.78
2 5 2.6e-09 3.7e-06 27.2 0.1 1 44 266 311 266 313 0.94
3 5 1.4e-06 0.0019 18.5 0.1 2 44 320 366 319 368 0.94
4 5 1e-09 1.4e-06 28.5 0.0 1 43 372 414 372 416 0.97
5 5 7.3e-07 0.001 19.3 0.0 3 44 424 467 422 468 0.92

Sequence Information

Coding Sequence
ATGATGGATGTGGAGATTGATAGTGATGAAGATGAGGAGCAGTTGCATGAGGATGTAAGGAGTCTAACTGCAGTGTTAGAGGCAGACGAGGCAAGTACAAATGAATCTCTCTCTCGATACGCGCCGTCGGTCGCCAGTACATCAAACACCCGCACAGCTAACCACGAACCGGTGGCCTCACAATCTGTATCCGAACCGCACAAAATAGATTCCGCATTGGCACTCAACAGATTGTACGATGAGAAATTGAAGCGGCTAGAGAAAGTCCTCAGCGCTCGACTACTGGAATGTCGGAGTAAACTGCAAGAAATCCAAGGATTGAGTCCCGTCACAGACAAACCAGAGTCGTTCCGCTACATCAACTGTGGCAAACCGTATTTCAGGGACAAATCAAACTTCCCCGCTCCGGATAATGATGACACTATCATGGTTAAATCCCAGATGTATGACTTCTCAGAGATCATGTCAGTGCCGGGTTGGACGGTCAAGGATAAAAGTCAGTTTGTAGTGATGATACACAAAATGTCAAAAGACATTAAGAAGGATGAATTGCAGTCAAAGATTGCTGCGTTGAAGCGACAAATTAGATCAAATAAAGGAAGCAAGACCACCAAATCAGAAATAGAAGCTCTCGAGAAAGAAATGTATAGGATAAATGAACAACCTCTTAATGAATTGGCTCTACCGTTGGATAGGGAATATGATTGGGAGACGTTAGCTAATAAGCTGAACAGGAGGCACACTCCACAGGAATATCAGGCGCTCTGGAAGTTATTCTTTCACCCTTCAATAAACAAAAACAGTTGGAGCAAGTCCGAACATGCAGCCCTGCAGACTATTTCTAGAGAACACAATCTACAAGACTGGGATGCAATCGCTAAGGAACTGGACACCGGGAGAACTGGTTACCAATGCTTTGTATATTACAAAACTAACATGGTCAATGTTACCACCGGACAAAAATGGACAAATGAAGAGGTGACATATCTGAAAAGATTGATTGAGTACTTCAGACAGGATAACTACATACCGTGGGGTAAAATAGCGGCGGCCATGGAGAATAGGAATAAAATTCAAATTTATAACAAATACTTAAGACTTGTTGAACAGAGAAAGGGTAGGTTCCTCCCCGAGGAAGATGCTGTGATACTGAACTGTGTGAACAGATTTGGAGAAGACTTTAAAAAGATGGTCCATTTCCTGCCCGGTAGATCGGTCAGCCAATTGCGTACGAGGTATAAGGTCATAAACAACGTGCGAATATCAACAGTTTGGACCGTGGAGGATGACCGAAAACTAATGCAAATTATTAGCAATCAAGATTCTGAGACAGCTTTTTCGAATGCTTCTAAATATTTTCCCGGCAAAACAAGGACCAATATAAGGTCTAGATATGTCACATTGTGTCGGTGGACTTTGAGGAACCCTCACATAGACATTCAATATGCGCCGAGACGCGGCGCGCGGCGCTTGAACCACGGCCAGCCCTCGGAGAACTTAAACAGGGCTATTGAGGATTTAAAAAACACATTGCAAGCAGAAGCCGAAGTCAAAACCAATAGGAGAAGAATATCAGCAAATTCAAGTGAATCTGACATAGAAGATGCAATTATTGCTACATTAATAAATGAACGGCTCAAAGAAGAGGAAAGTAAAAAATTCTCCCCAAGTGATGCAGATAAGAGTATAGTTATAGACTTCGGCGAGACCGTATCACCAACTGCTTTAAACGCGACCAATCTCAGCAAGTGTTTGGTTATTTTAGAATCGAGATTGAACCGGCATAAATTCAATGAGAGTGAGTACAGGGAACAACACCCAAAATTAGGGATGTCAGACCAAGAAGTATGTTTGGTCCGCGTTAAATCTTATTCTAAAAAAGAAAAAGTATCAACAATCAAAGTCGACGGTAGTCCTGACGTGTGGGGTGACATAACGTTGCCCCGAAAAACATACGTGCTTCCGCCGCATTATGCGACGATAACAGGATGTAGAGCACTGATGGCGTTCGTATCGAGCATGTCGGGATGCCACCTGCCTAACATAAATGTGATGTTAAGAAAAAACTCCATTCTAAAAAACGAGTATGATAAACTGATCGAACGCTTTTACACCCTGTTCCTGTGGCCAATGCTGCTGTCAAACGAAGGCCCTTTGCCACCCGTGAAGTTAAAAAGAGTGGAGAAATTCAAAAGGCCTCCTATACCATCGACGCCTTCCACGTCATCACTCGCGACAAGCGTTAGAATACATAGAAAATATAAACTTAACGATGAAGCTACTGATGGTAAAATAGATTTAGAGCCATGTGAAAAGATAGATAATATTACTTTAAAAGAAAATCTTTCTCACCTGCCTTACCTCTAA
Protein Sequence
MMDVEIDSDEDEEQLHEDVRSLTAVLEADEASTNESLSRYAPSVASTSNTRTANHEPVASQSVSEPHKIDSALALNRLYDEKLKRLEKVLSARLLECRSKLQEIQGLSPVTDKPESFRYINCGKPYFRDKSNFPAPDNDDTIMVKSQMYDFSEIMSVPGWTVKDKSQFVVMIHKMSKDIKKDELQSKIAALKRQIRSNKGSKTTKSEIEALEKEMYRINEQPLNELALPLDREYDWETLANKLNRRHTPQEYQALWKLFFHPSINKNSWSKSEHAALQTISREHNLQDWDAIAKELDTGRTGYQCFVYYKTNMVNVTTGQKWTNEEVTYLKRLIEYFRQDNYIPWGKIAAAMENRNKIQIYNKYLRLVEQRKGRFLPEEDAVILNCVNRFGEDFKKMVHFLPGRSVSQLRTRYKVINNVRISTVWTVEDDRKLMQIISNQDSETAFSNASKYFPGKTRTNIRSRYVTLCRWTLRNPHIDIQYAPRRGARRLNHGQPSENLNRAIEDLKNTLQAEAEVKTNRRRISANSSESDIEDAIIATLINERLKEEESKKFSPSDADKSIVIDFGETVSPTALNATNLSKCLVILESRLNRHKFNESEYREQHPKLGMSDQEVCLVRVKSYSKKEKVSTIKVDGSPDVWGDITLPRKTYVLPPHYATITGCRALMAFVSSMSGCHLPNINVMLRKNSILKNEYDKLIERFYTLFLWPMLLSNEGPLPPVKLKRVEKFKRPPIPSTPSTSSLATSVRIHRKYKLNDEATDGKIDLEPCEKIDNITLKENLSHLPYL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00621950;
90% Identity
-
80% Identity
-