Ndro016908.1
Basic Information
- Insect
- Notodonta dromedarius
- Gene Symbol
- -
- Assembly
- GCA_905147325.1
- Location
- LR990173.1:7041840-7042556[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.1e-08 3e-05 23.9 0.0 17 43 1 27 1 29 0.94
Sequence Information
- Coding Sequence
- ATGGGGATAAGGGAAGCTTGTCGAGTCTATGGCGTTCCGAAGACGACTGTCCATGATAGACTTTCAGGGAAAGTCTCAACTCATAAAAAACCAAAAGTAGGCCCTGATCCAGTGTTAGGCCACGTAGGAGAAGAAAAAGTTAAAAACTGGGTACTAGGTATGGCTAGATGTGGGTTCCCTATATACAAGAAAGATCTTCTCGATAGCGTATCTAAAATCATTAAAGATACTGGACTAAAAAATCCATTTAAGGATGACATTCCGGGAGATACTTGGTATAACGGATTCTTAAGACGTAATCCTGATGTGAGTGTTCGTGAACCCGAGGGCATTAATAATGCCAGAGCGGCTGTCACTGAAACACGTATACGATGCTGGTTTGAAGATTTGAAAGAATATGTGAAGTCCATAGATTGTTTAGACATTTTTGATGATCCGGACAGGATATTTAATGGAGATGAGACTGGATTTTCCCTTTGCCCAAAAAGCGGGAAAGTTTTGGGGCCTAAAGGGTACAAAAATCTTTACATGATTAAAAAGAACAATGAAAAAGAAAATCTAACCGTGCTGGTGTTGTTTGCAGCAAGTGGTAAGATTTGTCCTCCACTTGTGGTTTTCCCATACATAAGACCACCAAAAGCTCTGGTGGACAACATGCCCGAGTCATCTTCTCGGTCAGGTTCTCGGAAGATCAGAAAGTGGATGGATGAGAAGTGA
- Protein Sequence
- MGIREACRVYGVPKTTVHDRLSGKVSTHKKPKVGPDPVLGHVGEEKVKNWVLGMARCGFPIYKKDLLDSVSKIIKDTGLKNPFKDDIPGDTWYNGFLRRNPDVSVREPEGINNARAAVTETRIRCWFEDLKEYVKSIDCLDIFDDPDRIFNGDETGFSLCPKSGKVLGPKGYKNLYMIKKNNEKENLTVLVLFAASGKICPPLVVFPYIRPPKALVDNMPESSSRSGSRKIRKWMDEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01073531;
- 90% Identity
- iTF_01073531;
- 80% Identity
- iTF_01073531;