Ndro019272.1
Basic Information
- Insect
- Notodonta dromedarius
- Gene Symbol
- jarid2b
- Assembly
- GCA_905147325.1
- Location
- LR990160.1:13135341-13155978[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-20 3.2e-17 62.9 0.0 7 89 755 834 750 834 0.91
Sequence Information
- Coding Sequence
- ATGTCAGAGCCAAGGAAGGTAGAGGATAAAGTGAGTGACGGAGATCTCAAAGGTGCTGCACGTATTCTTTTTTCAAGTGATGTGTTATCTCCGGACTCGCCAGAAACCCTCGTGGCTCTGCAAGACAAACATCCCTCAGCTCAATCGGCAGCACCTCAATCCGCGGACCCAGCTGCGGTTCCCACCGCTCCCTGCCACCAATGCAATGAAAAGGACATAACTGTTTGGTTGTACCAAAACTCCTTAGTCACCATAGACAACCTCATCAAAAGAACTTTTGAGGGCATAATAAATGTGAAACTGTCTGAAAAGTCTTGGACCCAAGCATCTCTACCCATAAGTTTCACCACACGTAGAGTTCAAGCCCAGCGCAAGTTTGCGCAGGGTGCGTACGCCCCTGTTGTGATCTCCAGTGGAGGAGGAGGTGGCCCAGAAAAGAAGCCGGTGGAGCAGGCCAAGGAAAGAAGTATCATACGCAACCATGTGCCTGCCAAAACATTGTTGGATATGGTTTCATTTAAAAATATCCATACTCATCTACAGCCTTACGTGAAAATCCACAGACTGGAAAATATAACATTGGACTCAAACAGGAAACAAAAGAATACAGAGCTCACACATGAAAAACATAAACCAAATGTACCGAATGTAAAAGAAAGGCTTTCCAGGGCTAAGAAAACTCTCACCAGACATTCGTGGGATATGACACTGAGGTCTCGTTCGGAAGTGACAAAGCCCTCAAAACGGAACACAAACGCACGTAAGCGCAAGAGCAGTGAGCCGGATGTTCAAAAGACCAAGAAGAAGCGAGTGTGTGAGGATAACTTTACGCCGGATGATTACAGACCTCTAACTTATTTTAAAAAACCAAGAGATAAAAACAAGACCTCCAAAAAGAATAATAATATAAAAATGGCAAAAAAAGTTGTGGCTAAAAAGAAGAATATTAAAAACAAATCAAAGGGTAAGACTTCAAAGAATACATCAGAAAATGGAAAGAAAACCTCACCTCTTAAAGTCGCCGAATCTAAAAGTGGACAGAACCCATCTCAAGTATTGAATATGCCAGTATCACCTGCCCTGCCCGGACCGAGTACAGCGTTGCTGGAAACTGGAGATCCTTGTGATGTTGCCACTAACTCGCTTGCACCGACAATGGCGGTGAGGGAGTCTCCCGTCGAGGTGGCGGTTTTTGAACCCCAGCCGGGACCGAGCGGAATGCAGCGCAACCCCGACGTAATGAGTCATGCATCGGAGGTACCAACCGATCCTGGAAGTTTAAACTTTTCCCTCGATAGTGATAAGGCATTTTATTACGACACGTCTGAAATACGGCGATGGATCACCGGCTCATCTGATATAACGCCCATCGGGATCGCCAGTTCGCCGACAGACCCTGACAAAGAGCACGTCGACCCGCCGATACCGACCCCCAGCTGCCCCGCCACCACATGGGCCACACTGAAAGAAGTCATCGACGCTCCCACAAAAGACCTCGAAGCGAGGTGCAAAATTTGTGCAACGTGTAATAGAATAAACAATTTCTTCGTGTTATCTAAGTTATTAAAGAAATACAGACAAGTCGAATGTACAGACGAGGAGGAGAACGGCCAGGAGCCGCGGGCAGGGCTCCCGAAGGACAACACCATGGTGTCCCCGGACGGCGACCTGTACTTGGAGCTGCTGCCGAAACATCCCCACTTCATGATAAAGCTCAAGATACAAACAATTCACAACAAGCAGATGTTAAGCGCGCGGCTCTGTCCCAGGTCCGATGCTCTCATGAGTAAAGATTTAAGCCTCTTTGAGCATGAGAATATAATCGATCAACTTATAAAAATGCTGAAGTCGAATTTAGTTTCAACTAGCACTTTTTATGCACTACCCCTTGAGAGTCTTGAGCTCGAGAATACGACGGAGGGATCTGTGATAGACTTGACTCAAGCTGACAAGTGCTCTGTGAGGTCGGAGGACAGGAGTGACGCCGGCTCGCAACCCAGCTCTTTCCCACAAAGCGTCGACGGAGCGAAACAGTTCGACGCTCCGGTGTTCTACCCGACCACGGAAGAGTTTGCTGATCCAATAGCGTACTTTGAAAAGATTGCTCCTGTGGCATCGAAATACGGACTGTGCAAAGTTATACCGCCTCCCTCGCACTGGTTAGCTCCCAAGTGCAAGATAGATGACGACATCCGGTTCGACGTGATCAACCAGTACATATCGCGGCTGTACAACCGCTGGGGGCCCGCGTCGAGGGAACTGTGCGCCATCAAAGCGTGTCTCAAGACGCAGAGTTTGAATCTGACGCGATCGCCTTTGTTGGACGGTATTGAAGTAAACCTGCCCAAGTTATACCACGTCGTTCAGAGTAACGGCGGCTTAGAGAAAGTTATAAACAAGAAACGCTGGGGCAAAGTCGCCGAGGAAATGAGTTTCCCGAGGACGCCCAACCCAGAGAAGAAACTAGACTCCATCTATGTGAAGTACTTATTACCTTACGACACCCTTGCGCACAAAGAACGTCAAGAAATAATACGTAAGATTGAACGACATTGGAATGTTCGCAATCAAAAACTACTGGACCGGGCGTTGAACCCGCTCCATCGTCAGAAGCGTCTGCTCGGCGAGTCGGACTCTTCGGACGAGGACACTGGCGATGAGAGCGAGGTCGGCAACGCGCTGGCGGAGGCCGAGGATTGTATCGTGGCCGGATCCTGCATGAACCTCACCAAATTTAAAAGGTTGGCCGCAATAACCCTTGCTAACAACTTCCGCAATACAACGGAACCGTCGTTGCCTGTGATTGAGGAGCGCTACTGGCGCCTGGTGTTGCTCGGCAACGAGCATGTGTGCATTAACACCGCCTCCATAGACACCGGCGAAGAGGGCTATGGGTTCAGCAAGAACCGCCAGGACCCGTACTCGGAGCACCCATGGAACTTAAAGGTAAAAGGGATGCTCAGCCAGAACAGTGGGAACGTGCTGCGCTCGATGGGCCCCGTGCTAGGCCTGACCGTGCCGTCCCTGCACCTGGGCATGGTGTTCTCCTCCAGCTGCTGGCACAGCGACCCGCACGGCCTGCCCTGGATGGAGTATATGCACCAAGGCGCCACTAAGATTTGGTACGGAATTCCGGACGAGCAGAGCCGTAACTTCCGCAAGGCGGTGGAGACAGTCTGCCCCACGTCATGCCAGAACAAGTCGATATGGTTGCCGTCCGACATCAGCATGATCCCGCCGACGTTGCTGCTCGAGCACAACGTGTCGCTCTCCAAGGTGACGCAGAATCCGGGCGAGTTCGTCATAGTGTACCCGAAAGCGTACTCCTGCTCGATATCGACCGGGTACACTCTCTCCGAGAGCGTTTATTTCGCACCGTACTCCTGGCTCAACAGTGTCGATCTGGTGTTCAAAGAGTTGCGCGAGAGCTGCGAGCCGACCATGTTCTCGCTGGAGCAGCTACTGCTGGCGGTGGCGCAGGACGAGAGCACCCCGCTCGCCGTGCTGAGCCAGGCGCGCGACGCGCTCGCCGCCATCGTCGAAGACGAGAAGCGCCGCCGAACGGAGCTGATTCTCATGCGAATACCCTTGGTTTACGATGAGAACCGCGAGAACATCGCCAACAAGAAGCCGCGCAACACAAGCGCGTGGAATGTTCGCGACCTGGACGAGTGCGAGGTTTGCCGAATGACCCTCTACCTCTCCAAGGTGTCGGGGCTGACCGGACGGCGGTCGGCGGTGTGCCTGCAGCACGCGCTGCGGCTGCTCGAGGTGCGCAAGCACAGCGAGGGTCACGGCGCCGAGCTGGAGGTCACCATATACGTGCCGGAGTTTAAACTGACCGCAGTTCTCGACCAGGTAAACAGGCGGCTATTCAGGGACGACGTCGCCGGCTGCCCAACACATGACGTGTAA
- Protein Sequence
- MSEPRKVEDKVSDGDLKGAARILFSSDVLSPDSPETLVALQDKHPSAQSAAPQSADPAAVPTAPCHQCNEKDITVWLYQNSLVTIDNLIKRTFEGIINVKLSEKSWTQASLPISFTTRRVQAQRKFAQGAYAPVVISSGGGGGPEKKPVEQAKERSIIRNHVPAKTLLDMVSFKNIHTHLQPYVKIHRLENITLDSNRKQKNTELTHEKHKPNVPNVKERLSRAKKTLTRHSWDMTLRSRSEVTKPSKRNTNARKRKSSEPDVQKTKKKRVCEDNFTPDDYRPLTYFKKPRDKNKTSKKNNNIKMAKKVVAKKKNIKNKSKGKTSKNTSENGKKTSPLKVAESKSGQNPSQVLNMPVSPALPGPSTALLETGDPCDVATNSLAPTMAVRESPVEVAVFEPQPGPSGMQRNPDVMSHASEVPTDPGSLNFSLDSDKAFYYDTSEIRRWITGSSDITPIGIASSPTDPDKEHVDPPIPTPSCPATTWATLKEVIDAPTKDLEARCKICATCNRINNFFVLSKLLKKYRQVECTDEEENGQEPRAGLPKDNTMVSPDGDLYLELLPKHPHFMIKLKIQTIHNKQMLSARLCPRSDALMSKDLSLFEHENIIDQLIKMLKSNLVSTSTFYALPLESLELENTTEGSVIDLTQADKCSVRSEDRSDAGSQPSSFPQSVDGAKQFDAPVFYPTTEEFADPIAYFEKIAPVASKYGLCKVIPPPSHWLAPKCKIDDDIRFDVINQYISRLYNRWGPASRELCAIKACLKTQSLNLTRSPLLDGIEVNLPKLYHVVQSNGGLEKVINKKRWGKVAEEMSFPRTPNPEKKLDSIYVKYLLPYDTLAHKERQEIIRKIERHWNVRNQKLLDRALNPLHRQKRLLGESDSSDEDTGDESEVGNALAEAEDCIVAGSCMNLTKFKRLAAITLANNFRNTTEPSLPVIEERYWRLVLLGNEHVCINTASIDTGEEGYGFSKNRQDPYSEHPWNLKVKGMLSQNSGNVLRSMGPVLGLTVPSLHLGMVFSSSCWHSDPHGLPWMEYMHQGATKIWYGIPDEQSRNFRKAVETVCPTSCQNKSIWLPSDISMIPPTLLLEHNVSLSKVTQNPGEFVIVYPKAYSCSISTGYTLSESVYFAPYSWLNSVDLVFKELRESCEPTMFSLEQLLLAVAQDESTPLAVLSQARDALAAIVEDEKRRRTELILMRIPLVYDENRENIANKKPRNTSAWNVRDLDECEVCRMTLYLSKVSGLTGRRSAVCLQHALRLLEVRKHSEGHGAELEVTIYVPEFKLTAVLDQVNRRLFRDDVAGCPTHDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -