Nudd045477.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Notocelia uddmanniana
Gene Symbol
nfxl1
Assembly
GCA_905163555.1
Location
LR991073.1:17633266-17635737[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 2 5.8e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 22 0.065 1.9e+03 0.7 0.4 4 10 169 175 168 175 0.96
3 22 3.1e-07 0.0089 17.6 15.9 3 19 186 202 185 202 0.95
4 22 8.9e-06 0.25 13.0 12.6 3 19 239 255 237 255 0.91
5 22 0.29 8.2e+03 -1.4 1.6 5 10 279 284 279 284 0.91
6 22 2.1e-09 6.1e-05 24.6 12.8 1 19 290 308 290 308 0.99
7 22 3.8e-07 0.011 17.4 19.2 3 19 345 361 337 361 0.86
8 22 1.9 5.5e+04 -4.0 0.7 1 4 370 373 370 373 0.94
9 22 2 5.8e+04 -5.3 2.2 5 10 384 389 384 389 0.88
10 22 6e-06 0.17 13.5 18.3 1 18 395 412 395 413 0.97
11 22 1.4e-08 0.00041 21.9 17.3 1 19 422 440 422 440 0.99
12 22 7.8e-05 2.2 10.0 5.1 9 19 488 498 486 498 0.89
13 22 0.024 6.9e+02 2.0 1.0 6 12 497 503 497 504 0.92
14 22 0.015 4.3e+02 2.7 5.5 3 11 509 517 508 518 0.88
15 22 0.37 1.1e+04 -1.8 3.3 14 18 547 551 547 552 0.85
16 22 0.23 6.7e+03 -1.1 0.1 8 12 568 572 567 573 0.82
17 22 0.0035 1e+02 4.7 6.7 1 11 588 598 582 599 0.91
18 22 0.84 2.4e+04 -2.9 1.5 15 18 613 616 612 617 0.82
19 22 0.00022 6.5 8.5 15.5 1 18 628 645 628 646 0.90
20 22 2 5.8e+04 -6.5 3.4 9 13 652 656 652 656 0.71
21 22 0.00022 6.3 8.5 13.3 1 18 687 705 687 706 0.88
22 22 1.9 5.4e+04 -4.0 0.6 6 10 736 740 735 741 0.78

Sequence Information

Coding Sequence
ATGGCCCGGCGATACCACGACGCAGCTGCGAAATTGCAGCAAAATGTTCAAAAACATTTGAAGGGAATGAAAGAACTTTCGTCGTCCGAAGATGAGGCGCCGTACGAGTCCAGCGTTCTTGAGGGCGTGCTGCAGAGCTACAGAAATGGCGGCGGCGACGCTCACATGCTTAATCGCACGAAGAACATGCTGGAAGAAGCGATAAGCGGCCGCCCTGTAACATGCCTCATTTGCATAGGATCTATCAAGAGACTCCACCCCATCTGGACTTGCGACCACTGCCACTCATACTTCCACCTCTCTTGCATCCAAAAGTGGTCAAACGACAGCATTAGTCTTCGGAGCGAGGAGAACCACGGCCCTATTGCAGTGTTTGTGCCCAAAAAAATCGAATGGTGCTGTCCAAAATGCCGACATTCGTATAGTAAAGAGGAAATACCTCGCAAGTACCGCTGCTTCTGTAGCAAGACTGATGATCCTCCATTCCATCCATGGTTGATACCTCATTCCTGTGGAGAAGTGTGTGAGAAAAGGTTGTCAACAGGTGATAATTGCAAGCATAAATGTCTGTTGCTGTGCCACCCAGGTCCGTGCCCGCCCTGCCCGCAGACTGTCAACGGAGTGTGCTTCTGTGAGAAGGAACGGAAGCGGATTCGCTGCAGTGCTGCCAAATGGTCTTGTGGCCAGCAGTGCAAAAAGTTACTCTCCTGCAAATCCCACAAATGTGAAAATGTTTGCCATCAAGATGCTTGCCCACCCTGTACCTACACAAGTGTTCAGGCATGTCTATGTGGAGCGGAGAAGGTCAAAAGGCCCTGCAATGATCCTCTATGGCGATGTCAGAAGCCTTGCAATAAACCGTTTTCATGTGGTTATCATAAATGTGAAGAAATATGTCATTCTGGTGAATGTGGAGATTGTCCCAACTCTGGCATGCGGTCATGCCCTTGTGGTGCTAATCAGCGCTTCGTCCAGTGTCCTGATGTCATGGAGACCTGTGTGGGGACCTGCGGGAAGACTCATGATTACTGTGAACATACTTGTCCGGAGAAATGCCATAAAGGACCTTGTCCGCCATGCCAAGTGTTAATCGAAAAGAAGTGTCAATGCGGTACACATGTGAGGTCTTTACCATGCAGCAAGGAGTATAAATGTGAAACAAAGTGCCGAGGAGTAAGGCCTTGCGGAAAACATGGCTGTGCACGAAAGTGCTGTAATGGAAACTGTCCCCCGTGTGAAAAGATCTGTGACAAGCCACTTCAATGTGGTCGCCACAAATGCACAACGGTCTGCCACCATGGTCCATGCTATCCTTGCCCCCGCGAGTCCAAAGTAACCTGTCGCTGCAAAGAGACCTTTGTAACTGTTCCGTGTGGTCGAGAGAAATATACTAAACCACCAAAATGCAGCCTCCTGTGCAAGCTTAAATATAAATGCGGTCATATGGAAGAAAACAAACATTCCTGCCATTTTGGTGACTGCCCACCCTGTAAAGCGATATGCCACAAGCAGTACGAGAAATGTGAGCATGACTGCAAAGCCGTTTGCCATGCATTCGTAAATGTAGTTTTTAAACAGATTGAGAAACCCGCTACACCCTGGGAAGTGCAACCACCAAAAACCAAAGTCATGACTTTAGAATGTCCACCATGTGAGGTTCCCATTCCTATTGTCTGCTTCGGGGAACATGAGACAGCAGATCAGCCGTGTCACTCTGCGACGCGCCGCCCCTGCGGTCGCGAGTGCGGCCAGACACTTCCTTGCACCAAACATAAGTGTAAACTGCTCTGCCATTTGCACGCATCTGATACGAATTTCCCAAATGTTCCTTCCTCATGCGAACCATGTAATAGAGAATGCCTAGTCCCTAGGCCAGATAAATGTAGCCATAAATGTGCTAAAGGTGTTTGCCACCCGGGCACCTGCCCACCATGTGAAATCATGGAAAGAATACCATGCCACTGTGGAGTTACTGAGCTATACTTACGATGCCGTGAACTGAGTGCTGCTACGGAAGAAATGCTGTCTTGCAAGCAGCAATGCCCTAAGAATTTGGAGTGTGGACATAGATGCAGGAACCAGTGCCATCCGGGCACTTGTAGGCAGCAAGTCTGCACCAAGAAGACCAAGGTTTATTGCCCGTGTGGTAACTTAAAGAAAGACGCTCCATGTAACTCTGTAAGGAATGGGGAAGGGAAACCTTCCTGTGATTCTACTTGTGAAGAGAAACGTATTGCAACTCAGTTGGAACGAGAGAAAGAAGAGAAGAGACGGAAAGAGATTGAGGAAGAGAAAAATCGCAAGGAGCTAGAAGAATATGAATGGAAACTGAgtgggaagaagaagaaatacaaGGAGAAGAAGGTTGTGACTAATAGAGATGATCGGAATCTGCTACAAAAATATTGGATACCTTGGGCATCAGTCTTGGTTGTAGTAATGGccgctatttattttatattttatgtttaa
Protein Sequence
MARRYHDAAAKLQQNVQKHLKGMKELSSSEDEAPYESSVLEGVLQSYRNGGGDAHMLNRTKNMLEEAISGRPVTCLICIGSIKRLHPIWTCDHCHSYFHLSCIQKWSNDSISLRSEENHGPIAVFVPKKIEWCCPKCRHSYSKEEIPRKYRCFCSKTDDPPFHPWLIPHSCGEVCEKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGVCFCEKERKRIRCSAAKWSCGQQCKKLLSCKSHKCENVCHQDACPPCTYTSVQACLCGAEKVKRPCNDPLWRCQKPCNKPFSCGYHKCEEICHSGECGDCPNSGMRSCPCGANQRFVQCPDVMETCVGTCGKTHDYCEHTCPEKCHKGPCPPCQVLIEKKCQCGTHVRSLPCSKEYKCETKCRGVRPCGKHGCARKCCNGNCPPCEKICDKPLQCGRHKCTTVCHHGPCYPCPRESKVTCRCKETFVTVPCGREKYTKPPKCSLLCKLKYKCGHMEENKHSCHFGDCPPCKAICHKQYEKCEHDCKAVCHAFVNVVFKQIEKPATPWEVQPPKTKVMTLECPPCEVPIPIVCFGEHETADQPCHSATRRPCGRECGQTLPCTKHKCKLLCHLHASDTNFPNVPSSCEPCNRECLVPRPDKCSHKCAKGVCHPGTCPPCEIMERIPCHCGVTELYLRCRELSAATEEMLSCKQQCPKNLECGHRCRNQCHPGTCRQQVCTKKTKVYCPCGNLKKDAPCNSVRNGEGKPSCDSTCEEKRIATQLEREKEEKRRKEIEEEKNRKELEEYEWKLSGKKKKYKEKKVVTNRDDRNLLQKYWIPWASVLVVVMAAIYFIFYV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00023391;
90% Identity
iTF_00411076;
80% Identity
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