Nudd037601.2
Basic Information
- Insect
- Notocelia uddmanniana
- Gene Symbol
- rcor2
- Assembly
- GCA_905163555.1
- Location
- LR991068.1:9456628-9463307[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-09 3e-06 28.8 0.0 3 46 132 175 130 175 0.97 2 2 2.4e-11 7.3e-08 34.0 0.0 3 46 400 443 398 443 0.96
Sequence Information
- Coding Sequence
- ATGGTTCTGGCGGAACGAAGTAATGATGTACGAAACGGGAAGCGGTCGAGAGGGCCTAGCCCCAATGGCCATGGAAGTCCAGATTCCAGTTCTGAGGATGAAAATGTAGTGCCATTTGCAGCCGAGAAGATAAGAGTAGGGCGGGATTACCAGGCAGTGTGTCCAGAGTTGGAGCCCCTAGAGCAGAGAAGACCTGAACTAATTTCTGACAGAGCATTGCTTGTATGGTCACCGACTTGTGACATATCTGATACCAAATTGGATGAATACATAACTATAGCTAAAGAAAAGTATGGATACAATGGTGAGCAGGCCCTTGGTATGTTATTCTGGCATAAACATGACTTAAATCGGGCCTCCATGGATTTGGCAAACTTCACACCTTTTCCGGATGAATGGACAGTGGAGGATAAAGTGCTTTTTGAGCAAGCGTTTCAGTTCCACGGCAAGAGCTTTCACAGAATCCGACAGATGTTACCTGACAAGTCAATAGCTTCATTAGTCAAATATTATTACTCATGGAAAAAAACAAGGGCACGCACTTCATTGATGGATGTGGTTGGTGAAGGCCGTACGGCTGCAGGGTCTGGCACAGGCAAACGAGAGTCTGGTGCTGGCTCCGAGCCCGGAGGCTCTGACAAGGAGTCAGATAATGATGAGAAGAAGTGGACTATCCATCGAGGTATTGTCCGCGGGAACCGGTCCCCCGCGCCGGCGGCGCAGTGCAGCGGCTCGGTCGGTGCCCAGGGCGAGGTCGGCGGCGAGAGCGCGGGCAAGTGGTGCTCGGTGTGCGGCATTCAATGCTTCCAGACAACACCGCACAACTCGCAAAAGCTGTGTCAGGCCTGTCTCGTGCACGCCAGACGCACGGGGACGATGAGACCGCTCTGTGGGCCTTCGGGGCGGCGCGGGCCCGGCTCCAAACAGCAGCGATACAAGCACCGGCTGCCGAGAGGCATTTACATCAATCATGATGATCTGGTTGCCATGGCGACTGGCCCGCAACCCGGAGAACAGCCGCAGCCAGGCCTCGTCAATCAGGGCGAGGCCATGCTCAAAGCCATGGACAGAGAAATTATATCTCTAAAGAGACAAGTACAACAGAACAAACAGCAATTGAGTGCAATGAAACGGAAGGTGGGAGACAGTGGTGTAGAAGAACTAAGGCCTGGGGAACCGCCAGCAAAGATCAATTCGCGCTGGACCAACGACGAGCTCCTAATGGCAGTTACAGCGGTTCGGAAATACGGCAAAGACTTCCAAGCCATCGCGGAAACACTAGGCACAAAGACTGAAGCGCACGTCCGTACGTTCTTCATCTCATACCGCCGCCGCTACAATCTGGACGCAGTACTGCGCGAACACGAGGCTGACCGCGGCTCCAACCACATACCCGCAGGAACTACAAGCACAGAAAACGCAGAAAGCGCCGTTGATAACACCAACGGTAACAACGGAACCGCTTCACCACAAATGACGTCCAAGGATGAAAAAGTCAGTAGTAACCTTTTCACTTGA
- Protein Sequence
- MVLAERSNDVRNGKRSRGPSPNGHGSPDSSSEDENVVPFAAEKIRVGRDYQAVCPELEPLEQRRPELISDRALLVWSPTCDISDTKLDEYITIAKEKYGYNGEQALGMLFWHKHDLNRASMDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARTSLMDVVGEGRTAAGSGTGKRESGAGSEPGGSDKESDNDEKKWTIHRGIVRGNRSPAPAAQCSGSVGAQGEVGGESAGKWCSVCGIQCFQTTPHNSQKLCQACLVHARRTGTMRPLCGPSGRRGPGSKQQRYKHRLPRGIYINHDDLVAMATGPQPGEQPQPGLVNQGEAMLKAMDREIISLKRQVQQNKQQLSAMKRKVGDSGVEELRPGEPPAKINSRWTNDELLMAVTAVRKYGKDFQAIAETLGTKTEAHVRTFFISYRRRYNLDAVLREHEADRGSNHIPAGTTSTENAESAVDNTNGNNGTASPQMTSKDEKVSSNLFT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00018116;
- 90% Identity
- iTF_00659397;
- 80% Identity
- -