Nudd028986.1
Basic Information
- Insect
- Notocelia uddmanniana
- Gene Symbol
- Arid2
- Assembly
- GCA_905163555.1
- Location
- LR991063.1:18580075-18598305[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.9e-20 4.4e-16 60.7 0.0 2 89 17 101 16 101 0.94
Sequence Information
- Coding Sequence
- ATGTctaaatcacaaataaatacgaaatcAAGCACTTATCTTAAGGACAAGGAAGCATTTCTGAAGGAATTAAAGCAGTTTAATGAAAGCAAAAACATACCATTCAAGACTCCATCTGTAAATGGCATTGATATAGATTTATATCTATTCTATTCGTTAGTACAGCAGCGAGGTGGTATTAGTAAGGTTAACTTCTATGATGTATGGGATTCATTTCTGCGCCCTCTGCGATTACCACACCCTTGTGTCAATGGTTCAACACTGTTGAGAAGAATTTACGGCACATACCTAGAAAAGTATGAGAAAGCTAAAGGCCCTCCGAGCAGGGATGATGACAATGACATGGATGAAGACCTCAGGTCCACCCGAGGCAGGGGGAGAGATGCGCCAAGGACACCTTATGGAGGGGGCACATATTACACAGCCTCTGGTGAACCTCTCCGCGCAGCCCAAACCCGCGTGGCAGGTCCCTCTGAGCGACTGGCACTCTCCCTGCTCTCGCCTATGCCGAACGAGCAGGACTTCGCAGTTAACGTGTGTACCGTGTTGGCCGCTGACCACTCCAACAGGATGCCTTTAGGGACCACCCCGCACATATTAGATTTCCTGCTGGCTCATGCTGGTGTTTACAATCATGGAAGTCTCCGGGACACAATCGGGCGCTCGTACTTCGAGGCGCGAGGCCGCTACCCGCACGAGTTCTGGCAGCTCcgggccggcggcggcggcgccaaGGAACTCGCCGACGAGACCAAGTTCTCCCAGCTCAGCGGAGACCAGCCAGAGTTGATGGTGCAGGCGCTGGCAGCTCAGAATACTTTGAATGACTGCCTGATGAAGGAGTGCGGGGGAGAGGAGCTGGTTGAGAAGATTCTAGAAGAGGAAGCACATGAAGATTGGGTAACAGAGCCATCAGAAGACGAACAACTATTCGCACCGGAACTCCCAGGAGGTGCCTCTTGCGTCTACACTCAACGCGTCCTTCAGATAGCCTCCATAGTCCGCTCCTTGTCCTTCCATGAAGAGAACGTACAGTATTTATCGAAGAACACGACTCTGATAAGGTTTTTGCTTCTGTGTGCGAACTGCTGGGTTGGGAGTCTGAGGCAATCTGGGTTGGATTCGCTGGGAAATATCTCTACTGAGCTCATTATCAAGGACCCGGCAACATGCCTCATCTCTCGCCACATCCTGTCCACCATCCAATCGGCTCTGGTCTCCAACGACAGGGCCAGAGTATTGGCAGCGTTGGAACTACTTAATAAACTCGCCCAGAATGAGGTCAATGAGGATGCTCTTCTCAAATCCTTGGAGGCTAAGGTATACCAGGACGTGTGCTCGCTGCTGACGCTGCGCGACATCATGGTGCTGGTGTGCACGCTGGAGTGCGTGTACGCGCTCACGTCGCTCGGCGACCGCGCGGCCGAGTGCGTGGCGCGCGTGCCCGGCCTCGTGGGCACCCTCGTGTCGCTCGTCACTGTGGAGGCACAAAGCTACGGGCCGCGAGCTTGCATCTTAATGCGGGTTGTGGAGACTGTGAGCGGCCCCAGCGCGGTGGCCGCTGCAGAACAAGAGCGACAGAATCAGCCACAACAACAACAGGCACAGCAGTCAGTGGCCGCGCCGTCTACTCCGACGAAGGAGGTGCCGCAGTCGCAGTCGCCGCAGCCCGCCGCGCCGCCCAACAGCATACAGCACTCGCACATGCAGCAGCGTACTGTGCAGGAAAACGAAAATTTCGCGCAAGCATGGCTCCGCAACACGTACGAAGCACTGCCAGTCGGCGACAATAGTACCTGCGACGCGCCGGAGCTGTACCGGCAGTACCTCGCCTGCTGCGCCAAGCTCAACAGGAAGGGGCTCATCGCTCCCGCCAACCTGTCCCGGCTCGTCAGGACCGTATTTGGCGGGACTGTGGGTCCGAACACGATCACGTTGGCTAACGGCGAGACACAACAAGTCTACATCGGTATTCGACCGAAGAATCCACAGAACAGAACCAACCCACCGGCAGGGCCAGCGTCGCCTATACTGAAAGCGCAGCTGACGAACAAGACGGCGGCAGTAGAAGTTAAGACGGTCGTATCGCAACCACAGCCGCAGCCTCAGCCGTCGCATCAGCACATCTCCCACGCGCTGGAAGCGAACGCGACCAACACAACCCTAATAAAACACCTGCTCGCCAATAAAGTAAGCCCCGCCCTACAAACGCAGCCGCAAGTAGCGCAAAGGCAACAGAACCAGCAAAGAGTCGGTGCGACGTCTGGATCGGTGGTGCTACAGGGTAACCAGTCGGTAAGATAA
- Protein Sequence
- MSKSQINTKSSTYLKDKEAFLKELKQFNESKNIPFKTPSVNGIDIDLYLFYSLVQQRGGISKVNFYDVWDSFLRPLRLPHPCVNGSTLLRRIYGTYLEKYEKAKGPPSRDDDNDMDEDLRSTRGRGRDAPRTPYGGGTYYTASGEPLRAAQTRVAGPSERLALSLLSPMPNEQDFAVNVCTVLAADHSNRMPLGTTPHILDFLLAHAGVYNHGSLRDTIGRSYFEARGRYPHEFWQLRAGGGGAKELADETKFSQLSGDQPELMVQALAAQNTLNDCLMKECGGEELVEKILEEEAHEDWVTEPSEDEQLFAPELPGGASCVYTQRVLQIASIVRSLSFHEENVQYLSKNTTLIRFLLLCANCWVGSLRQSGLDSLGNISTELIIKDPATCLISRHILSTIQSALVSNDRARVLAALELLNKLAQNEVNEDALLKSLEAKVYQDVCSLLTLRDIMVLVCTLECVYALTSLGDRAAECVARVPGLVGTLVSLVTVEAQSYGPRACILMRVVETVSGPSAVAAAEQERQNQPQQQQAQQSVAAPSTPTKEVPQSQSPQPAAPPNSIQHSHMQQRTVQENENFAQAWLRNTYEALPVGDNSTCDAPELYRQYLACCAKLNRKGLIAPANLSRLVRTVFGGTVGPNTITLANGETQQVYIGIRPKNPQNRTNPPAGPASPILKAQLTNKTAAVEVKTVVSQPQPQPQPSHQHISHALEANATNTTLIKHLLANKVSPALQTQPQVAQRQQNQQRVGATSGSVVLQGNQSVR*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00021123; iTF_00871082; iTF_00462157; iTF_01463042;
- 90% Identity
- -
- 80% Identity
- -