Nudd022148.1
Basic Information
- Insect
- Notocelia uddmanniana
- Gene Symbol
- XBP1
- Assembly
- GCA_905163555.1
- Location
- LR991060.1:5552824-5556379[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.8 1.5e+04 -2.3 0.1 16 25 29 38 27 39 0.73 2 3 3.9e-18 1e-14 55.9 9.3 2 62 43 103 43 106 0.93 3 3 0.00028 0.74 11.5 0.3 33 55 88 110 87 115 0.90
Sequence Information
- Coding Sequence
- ATGAGTGCTCCGATAATCATCACGGTACCGAACAACTACCTGGCGGTGGATGAAGACCAGAAGGTGGTGCTGGAGCCGGCGTCTCCCGCCCCGTCGCGGAAGCGCCGGCTTGACCATCTGTCTTGGGAGGAGAAGATGCAAAGAAAGAAACTGAAGAATCGCGTGGCGGCTCAAACCTCCCGCGACAGGAAAAAGGCCAAAATGGATGAGATGGAAGCCAAGATACAGGAGTTCATGGACAGGAATGATCAACTGATCAGCGAGGTGGAAAGTCTTAAGGCGTTGAACGAGCGTCTGATGAGTGAGAACGCAGCGCTGCGCGCGGAGCGCAGTGTCGTGGGGGCCCGGGGACCGGCAGAGTCTACTCCTCGGCGGCAGGAGGGGCCCCCTCAGGCACTGCGCGCGGCGCGTCTGCTGCTGGCGATGTGTCTCCTCTCACAGACCTCCTCCAGCACCTCGAGTCTGAAGAATACCTCGATACACTCCAACAGCTGGCAGACTCCCTCCTCCAAGAAATTGATGCAGGTTGTGCAGGAGAGGCTCAAGATGTCCCAGTGCGGGACACTGGAGAGCGCTCTAAAGGAGTTGAAGTGGTGGGGCCCGCACCAGAGCACCTGGAACCCAGTGAAGATGTCATAG
- Protein Sequence
- MSAPIIITVPNNYLAVDEDQKVVLEPASPAPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEAKIQEFMDRNDQLISEVESLKALNERLMSENAALRAERSVVGARGPAESTPRRQEGPPQALRAARLLLAMCLLSQTSSSTSSLKNTSIHSNSWQTPSSKKLMQVVQERLKMSQCGTLESALKELKWWGPHQSTWNPVKMS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01019964;
- 90% Identity
- iTF_00656883;
- 80% Identity
- -