Nnoc022673.1
Basic Information
- Insect
- Nomophila noctuella
- Gene Symbol
- ZFX
- Assembly
- GCA_958496325.1
- Location
- OY292509.1:650996-655609[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.00089 0.072 14.2 4.0 2 21 171 190 170 191 0.94 2 18 1.5 1.2e+02 4.0 1.5 1 23 224 247 224 247 0.92 3 18 0.027 2.2 9.5 1.5 2 23 253 274 252 274 0.95 4 18 3.6 2.9e+02 2.8 1.5 2 21 278 297 278 298 0.92 5 18 0.0041 0.33 12.1 0.6 2 23 342 364 341 364 0.95 6 18 0.019 1.5 10.0 1.0 1 23 398 420 398 420 0.98 7 18 7.5e-05 0.006 17.6 0.7 1 23 426 449 426 449 0.98 8 18 0.04 3.3 9.0 0.2 1 23 456 479 456 479 0.94 9 18 0.0011 0.087 13.9 6.3 1 23 489 511 489 511 0.98 10 18 0.0018 0.14 13.2 0.1 2 21 628 647 628 648 0.94 11 18 0.29 23 6.3 1.1 2 23 653 673 652 673 0.96 12 18 0.82 66 4.9 0.2 1 20 678 697 678 699 0.86 13 18 7.9e-05 0.0064 17.5 0.0 2 23 707 729 706 729 0.93 14 18 1.9 1.5e+02 3.7 2.3 3 14 734 744 733 752 0.75 15 18 0.00014 0.011 16.7 1.3 1 23 763 786 763 786 0.97 16 18 3.6e-05 0.0029 18.5 2.3 2 23 793 814 792 814 0.96 17 18 0.00021 0.017 16.1 2.3 1 23 821 843 821 843 0.98 18 18 1.9 1.6e+02 3.7 3.0 2 23 865 887 864 887 0.90
Sequence Information
- Coding Sequence
- ATGAGTAGAGAAATAGACGTAAAAGCCCTCGTATCACATCTGGTGCGGGGGGATGGTGCTGATAAGTGTAGAATATGTATGGGGGATACGTCGGAAGGCCAAGTGCACCTAGGAGATACCGTGATGATGGACGGAGAGCGGCCTGTGACCCTCGCCGAGCTGCTAGAAGTCATTACAGGAGTTGAGGTACCGGAGGCTGCGGACCTGCCGAGCGGACTGTGCTCGTTATGCTCCGGATCAGCCATCGATGCTGCTAACTTCTCGATACTCTGCCGTAAAGCGGATGCCAGATGGAATTTGACAGTAAAACTGTTAGAGAATTTAGCCGAAGTTGTGCCGGAGACTGGGATGACTCTGTACGCTTTATTGCATGGTGATGAGATGACAATCACTACCGAGATGAAAGAAGTCCCGGATAATGATGAGTTGGCCCGTAGTAGGTCACCATCACCGTCGAAAGAGCAGGCCTCTAAAAAGAAGACACGTAAACGATTTAAAATTCTGCACTGCCAATGCCCTTtctgtaataaacattttaaatatgccGAACATTTGGCTCAGCATTTGAAGGATTCGTCAGATTACAGCAGAGCTTGTAGCGTTTGCGCTGTGGTTATGAATAGGAATGACTTGATTGAACATCTGAACTTAGTTCATGGTGTGACACCGTTTGATTGCAAAAAATGTTCCGCCCTGTTCTCGTGCGAGGCAAAATTGACCGCTCACATGTCTGCTAAGCACTCTAAAGGTGCATGTATTTGTGGGGAGTGTGGCTGCAGCTTTCAAACAGGGCAGGCTTACCAGGCCCACCAATCGGTGCATGCAGTCAACACATGTCCAGGCTGCAACGATTTGTTCAGAAACCGAAACTGCTACGTCCATCATGTCAAAGTATGCTGTGATCTTGATAAGAATCGCAAAGACACACACAAAACTAAGCACAAAGTACTGATTGAAGTTAAGAACAGAGTTAGTAAGAAGAAAACTAGAGTCGGCCTTCGAGGAAGTGCTCAAAATGAGTGTATATGCGATTACTGTAATAAAAAGTTTGCAGGGAAGAAATTCGTAGCGGCTCATATACAGATAGTTCATATGAAGAACACTCATACTCCGTGCGCTTACTGCGGTAAGCTCCTAGCAGCGGCTCGGATGTCCACTCACTTAAAAACACATGAGACGAACATTCCCGTTTACAAATGTGAGCACTGTAACCTCGTAATGAAGACTAAACTAGGCTGGATTCAGCATATACGTCTCCACACTGGAGAACGTCCATATGAGTGCAAATACTGCGGAGAGTCATTCTCAGCTTCATCACGGAGGTCTCAGCACATACGGACAGTTCATACTGAGAATACGATGAAGCATGCATGTGAGCTGTGTCCTGCACGTTTTGACTTACCGTTCAGGTTGAGGAACCACATGGCAAGCGTTCACAGCGATGAGGCCAAGAAGAATGTTCAGTTTGAATGCCCAGAGTGCCACGAGAAGTTTAGCAGTTGCAGGGGACTGATACATCACAGTCGGAAACACCAGAAGGGTATTATAAGGAAACCGGTGCGAAGAGTGGTGTATCCGGAAGCGTTGAAAGTCGACACCGCGCCGTCTCTTCCAACGCTTGTGTGCAAAGTTTGCGCGACGAGCGCGGTGTCCGCCGCGCCTTTCATACGCCTCTGCCGCGACTCGAACATCAAGTGGCACGAGATCACTGATCACTTGCACCAAATCGAGGAAACTAAAGATAAAACAAAGCTCGTCATCATAAGCGATGAGAATATCGTCACTATAACCAACCAAAAGCCTTGTAAAACTAAAAAGCAGGTCGTCCAAGCTCTAGCGGCGAGGGAAAGACCGAGAAATAGAAAGCTTCTGTGCGACGCGACATGCCCCGAGTGCGGAAAGAAGTTCTACAACGTTGCCTCGATGAATTTGCATCTGAAAGACTTGAATAAGGTCGTATGCCATAAGTGCAAGACGATCTTGCCGCTTGACCAATTTGTCAGTCACATGCGGACACATGATTTGGAAGTGTATATGTGTACGGCGTGTGATACGGTTTTTAATAAGGAAAACGTGTATCAGAGTCATAAGGAGGTGTGCAAGTATAGAGGCAATTTGGTATGTCCGGAGTGTTCGAAACGTTTCCCTAACGAGAGCAATTTGGTCCTGCACGTAGCTGTGAAGCATACCCCGAAAATATGTTCAGTTTGTGGTCAGAAGTTCAGTCGGCTCTGCTTCAAGAATCACAGTAAAACTTGCGTTGGATCCAAAAGTCTCGAAGGCCCTTTCACGTGCGATTATTGCTCTAAAACGTACAAGGTTAAGAACGCTTTGATACTCCATATAAAGTACACGCATATGAAAAAATGGAGTTGTCAGTGTGACCAGTGCGGAAAACGGTTTGGGAACCCAGCCCATTTGGAAGAGCATAGTAACACACACAACAGAATAGCTGATAGATACATTTGCAATTTATGTGGTTTGAAATACAGCACGAGGAGAGGTTATCAGAGACACTATAAGAGACATTTTACCGTAGACGGAAAAATACTGAAGGAAGCGGCTCAAGGAAGATATAGAAGTAAACCTTTGAAATGTATCGTGTGTAGTTTCACTACTTTTTATAAGAAGAACTACAGGAGTCATCTTAAAACGAAGCACAACTTAGTGGGATGTTTGGAGAAGTGA
- Protein Sequence
- MSREIDVKALVSHLVRGDGADKCRICMGDTSEGQVHLGDTVMMDGERPVTLAELLEVITGVEVPEAADLPSGLCSLCSGSAIDAANFSILCRKADARWNLTVKLLENLAEVVPETGMTLYALLHGDEMTITTEMKEVPDNDELARSRSPSPSKEQASKKKTRKRFKILHCQCPFCNKHFKYAEHLAQHLKDSSDYSRACSVCAVVMNRNDLIEHLNLVHGVTPFDCKKCSALFSCEAKLTAHMSAKHSKGACICGECGCSFQTGQAYQAHQSVHAVNTCPGCNDLFRNRNCYVHHVKVCCDLDKNRKDTHKTKHKVLIEVKNRVSKKKTRVGLRGSAQNECICDYCNKKFAGKKFVAAHIQIVHMKNTHTPCAYCGKLLAAARMSTHLKTHETNIPVYKCEHCNLVMKTKLGWIQHIRLHTGERPYECKYCGESFSASSRRSQHIRTVHTENTMKHACELCPARFDLPFRLRNHMASVHSDEAKKNVQFECPECHEKFSSCRGLIHHSRKHQKGIIRKPVRRVVYPEALKVDTAPSLPTLVCKVCATSAVSAAPFIRLCRDSNIKWHEITDHLHQIEETKDKTKLVIISDENIVTITNQKPCKTKKQVVQALAARERPRNRKLLCDATCPECGKKFYNVASMNLHLKDLNKVVCHKCKTILPLDQFVSHMRTHDLEVYMCTACDTVFNKENVYQSHKEVCKYRGNLVCPECSKRFPNESNLVLHVAVKHTPKICSVCGQKFSRLCFKNHSKTCVGSKSLEGPFTCDYCSKTYKVKNALILHIKYTHMKKWSCQCDQCGKRFGNPAHLEEHSNTHNRIADRYICNLCGLKYSTRRGYQRHYKRHFTVDGKILKEAAQGRYRSKPLKCIVCSFTTFYKKNYRSHLKTKHNLVGCLEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -