Nnoc023494.1
Basic Information
- Insect
- Nomophila noctuella
- Gene Symbol
- ZFY
- Assembly
- GCA_958496325.1
- Location
- OY292510.1:1667415-1679757[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.011 0.88 10.8 0.1 1 23 290 312 290 312 0.98 2 10 0.015 1.2 10.3 0.3 1 23 316 339 316 339 0.97 3 10 0.3 24 6.3 2.0 1 23 346 368 346 368 0.85 4 10 0.00019 0.016 16.3 2.8 2 23 373 395 372 395 0.95 5 10 2.9e-05 0.0023 18.9 1.9 1 23 401 423 401 424 0.95 6 10 0.0004 0.032 15.3 0.4 2 21 434 453 434 458 0.93 7 10 0.00081 0.065 14.3 1.5 1 23 466 489 466 489 0.94 8 10 0.00049 0.04 15.0 0.6 1 23 494 517 494 517 0.98 9 10 4.1e-07 3.3e-05 24.7 3.2 2 23 525 546 524 546 0.97 10 10 4.1e-05 0.0033 18.4 1.3 1 21 552 572 552 577 0.93
Sequence Information
- Coding Sequence
- ATGGATGgtatagaaaataaacgaaatgtGAACAATGTTATTCATAAATTGCTATGCAACGCCTGCCTGAGTGTGGGTCGCACATTACACGAAATCACAGATGACAAGATATCCAGGTTCTATTTGGAGGCATTGAGAGAAGTTCCTCTATGCAACATGCCGTCAATGTGTCCGAGTGTGTGTTGGGAGTGCAAGGCAGCTCTGAAGAAAGCTGTTACGTTTAGAGAACAAGTGCAAGACTCATATAGGATACTACAGACTTATACTAATGagAACATACATGAATGTCTTCTAGGTGATGTTGAAAGGTCCTCTTTACGAGTGCGAACCATGTCACCCATAACTATTGACCCTGAGAGCTCTGCGGAACGGGAACAGAGTCTGAGTTATAAGGAGGAACTAAAGTTTGAGTGGGTTGGGAAAGAATCAAGCGAGGACTTACTTCCCCAGGATAGCAGATTATGTCCGCTGGGTACCACAATTGATGGAGAGGGTGACCAGACCATGGTCTATAAACATGAGGTCAAGTGTGATTTTGATAGGCAtgAAGTTAATGAAGATATGCTTTTAGAAGACCACCTACCCTCCGACTGTGACTTTCAAGAGTTGGAGACAGATCTCCCATTgctgaagaagaagaaaaagaaaaaacatgttCAAAATAAGATCAAAAAGACTGAGAAAGTTGTTAAGCAACTTAAGAATGTTATAAAGAATATGAAAACGAAACCCAGCAAGCCATCATCTAACGGAAAATACATAACTGTAGAGTTATCTTACGAAGAAATGGTTTCCGAACGAGAGCAGATGAGTGAGAAAAGTGAATCGTGCATAAGGCCCGATGAGCGGAACAAGgaagTGGGTGATTACATTTGTCCAATATGTAAGACAGCGGTTGCTTCAGTGGAGGCCTATATGACACACTACAAGAGACACTTGAGAAGATATGAATGCGTGATATGTAAGAAGCGAACACCTGACGTGCCATCGATGAGGCAACATTACTTAACGACTCATGAGATGCCGCTTAAAGAATACAAGTGTGACTTATGTGGGAAAGTGTCTAACTCAATAGACACGCACAGATACCATAAGGACACACACAAGGCGAGAGTGCAATGTGGGCAGTGTGATAAAACATTCACACATCGAGCCGGCTTGTCAAACCATAGACATTCAGTGCACGAGCTTCGCAACGTGTTTCCCTGCACCGTCTGCGATAAAGTGTTCCGATGGAAGACCAGTCTCAAGAGACATCTTGAGATGCATCACGCCAAGAACAAGTCATCATCAGCGGCGTACTGCGAAGAGTGTGGAGTAACCTTCTCCTCAATCAGCTCGTACCAACGACACGTCAAGAACAGCCTGAGACACGTCACACAGGACCAGCTAAGgTATATTTGTGATCACTGCAACCGCAGATTTGCAGATAAAACCAAGATAAGGGATCACATAGAAGAAAAACACCTTTACAAGACTTACCAGTGTCACATTTGTCTCAAGCCGTCAAAGAACCGCGTAGCTTTGGATCAACACATCCGCAACGTGCATAAGGGTCGTCCCAATAACAAGATGTGCCATCACTGCGGGAAAGGCTTCCCGACTAAAGGTCAGCTAGAGTCACACATACGGACGCACACGGGAGAGAGGCCTTTTATATGCGAATTCTGCCCGACGACGTTCTCACAGCAGTCCAATTTGTACAAACACAACAGACagTTGGTGTTTCATTCATGGaccttcgagccggatgtagTGAGTGAACCAGGATACCAGTGA
- Protein Sequence
- MDGIENKRNVNNVIHKLLCNACLSVGRTLHEITDDKISRFYLEALREVPLCNMPSMCPSVCWECKAALKKAVTFREQVQDSYRILQTYTNENIHECLLGDVERSSLRVRTMSPITIDPESSAEREQSLSYKEELKFEWVGKESSEDLLPQDSRLCPLGTTIDGEGDQTMVYKHEVKCDFDRHEVNEDMLLEDHLPSDCDFQELETDLPLLKKKKKKKHVQNKIKKTEKVVKQLKNVIKNMKTKPSKPSSNGKYITVELSYEEMVSEREQMSEKSESCIRPDERNKEVGDYICPICKTAVASVEAYMTHYKRHLRRYECVICKKRTPDVPSMRQHYLTTHEMPLKEYKCDLCGKVSNSIDTHRYHKDTHKARVQCGQCDKTFTHRAGLSNHRHSVHELRNVFPCTVCDKVFRWKTSLKRHLEMHHAKNKSSSAAYCEECGVTFSSISSYQRHVKNSLRHVTQDQLRYICDHCNRRFADKTKIRDHIEEKHLYKTYQCHICLKPSKNRVALDQHIRNVHKGRPNNKMCHHCGKGFPTKGQLESHIRTHTGERPFICEFCPTTFSQQSNLYKHNRQLVFHSWTFEPDVVSEPGYQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -