Nnoc019533.1
Basic Information
- Insect
- Nomophila noctuella
- Gene Symbol
- tfap2e
- Assembly
- GCA_958496325.1
- Location
- OY292503.1:6771994-6798461[-]
Transcription Factor Domain
- TF Family
- AP-2
- Domain
- TF_AP-2 domain
- PFAM
- PF03299
- TF Group
- Basic Domians group
- Description
- Activator protein-2 (AP-2) transcription factors constitute a family of closely related and evolutionarily conserved proteins that bind to the DNA consensus sequence GCCNNNGGC and stimulate target gene transcription [PMID: 2010091, PMID: 1998122]. Four different isoforms of AP-2 have been identified in mammals, termed AP-2 alpha, beta, gamma and delta. Each family member shares a common structure, possessing a proline/glutamine-rich domain in the N-terminal region, which is responsible for transcriptional activation [PMID: 2010091], and a helix-span-helix domain in the C-terminal region, which mediates dimerisation and site-specific DNA binding [PMID: 199812]. http://www.ebi.ac.uk/interpro/entry/IPR013854
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 4.6e-23 1.3e-18 68.2 0.1 1 44 131 174 131 176 0.98 2 8 1.5e-15 4.3e-11 43.7 0.0 14 44 174 204 174 205 0.97 3 8 5.4e-17 1.5e-12 48.4 0.1 14 46 204 236 203 247 0.95 4 8 3.2e-06 0.089 13.3 0.0 29 48 250 269 246 283 0.87 5 8 1e-12 2.8e-08 34.5 0.0 82 136 446 497 431 500 0.86 6 8 1.6e-12 4.4e-08 33.8 0.0 83 136 517 567 500 571 0.86 7 8 3.8e-05 1 9.8 0.0 85 114 575 604 569 621 0.85 8 8 1e-20 2.9e-16 60.5 0.0 83 196 621 718 602 719 0.86
Sequence Information
- Coding Sequence
- ATGCTGTCACACGGCGGCTTCAGCTATGGCGGCGGAGAGCGACGGGCGGACTACGGCGCGCGCGAGCAGCACGAGCTGGCCCTGCACCACGCGCTGCACTCCGCCGAGGAGGCGCCGGTACGTCTCATCACCGTCACTAgctcatcaccatcaccagcaGCCTGGCTCCTCGCTGAGCGGACTACGGCGCGCGCGAGCAGCACGAGCTGGCCCTGCACCACGCGCTGCACTCCGCCGAGGAGGCGCCgGGTTACCATACAGAAATATTACGAATCACAATGGCGATCAAGCTGCGCGCATGTTTGGGGCGTGGCGCTGATTGTTAAGGCCTATTCAATGAAAGGGCGCGACGGTCTCGGCGGCAGCGGGTCGTGCGCCCCCAACGACGTGTTCTGCTCGGTGCCGGGGCGGCTGTCGCTGCTGTCGTCCACCAGCAAGTACAAGGTCACCGTGGCGGAGGTGCAGCGCCGCCTGTCGCCGCCGGAGTGCCTCAACGCCTCGCTGCTCGGCGGAGTGCTCAGGAGCAAGTACAAGGTCACCGTGGCGGAGGTGCAGCGCCGCCTGTCGCCGCCGGAGTGCCTCAACGCCTCGCTGCTCGGCGGAGTGCTCAGGAGCAAGTACAAGGTCACCGTGGCGGAGGTGCAGCGCCGCCTGTCGCCGCCGGAGTGCCTCAACGCCTCGCTGCTCGGCGGAGTGCTCAGGAGAGCGAGCCCGCACATTGATAGGCAACCGTTTAGATCGACGGAGTCGGAGCCGGAGTGCCTCAACGCGTCGTTGCTCGGAGGAGTGCTCCGGAGAGCGATAACAGCGAACGACCTCAACTTAACACCACTCAACTTACACGACAGAACACCGCAGAAGAATGAAGAACAAATAGACAGACAcactaaaataaatgaatggacTCAGAAGTCACTGCACGGACGACACCGCCAAGATTTGTGCCAGCCCCACGTCGACAAAGATGCGTCGAACGAATGGCTAAATCGTGGAGAGTTGTTCCCAGAGACCGAGGGTTTCATGATGGCAATCCAAGACCAGGTAATTGAAACGAggaactacaaaaaatatataataagaaaCCACAACTTACCGACTGATATGTGCAGGAAGTGCAATAGTGCATCAGAAACGATTCAGCACATAACAGGAGCGTGTCGAGCTATTGTGCAGACCGATTACAAGCACCGGCACGATCAAGTCGCCAGCATCGTCCATCAGAAGCTAGCCGAGATGTACAAGCTTTTAACGCAACCCCCTATAGCATACTACAAGTACAGCCCAGAACCTGTTCTTGAAAATCAAACTCACAAGATGTATTTTGATAGAGCCATACTAACTGACCCTGAAGCAGTGCACCTAGCCCGCGACTTCGGCTACGTGTGCGAGACGGAGTTcccggcgcgcgcgctggcggaGTACCTCGCGCGGCAGTACGCGGAGCAcgacgcgcgccgccgccgcgacctACTCCAGGCCACCAAGCAGGTGCGGCCACTTACTGTCTCTCCTAGCAAAGCAGTGCACCTAGCCCGCGACTTCGGCTGCGTGTGCGACGAAGCAGTGCACCTAGCCCGCGACTTCGGCTACGTGTGCGAGACGGAGTTcccggcgcgcgcgctggcggaGTACCTCGCGCGGCAGTACGCGGAGCAcgacgcgcgccgccgccgcgacctACTCCAGGCCACCAAGCAGGTGCGGCCACTTACTATCTCTCCTAGCGAAGCAGTGCAcctagcccgcgacttcgcctgCGTGCGAGACGGAGAGTACCTCGCGCGGCAGTACGCGGAGCAcgacgcgcgccgccgccgcgacctGCTACAGGCCACCAAGCAGGTGCGGCCACTTACAATCTCTCCTAGCGAAGCAGTGCACCTAGCCCGCGACTTCGGCTGCGTGTGCGAGACGGAGAGTACCTCGCGCGGCAGTAGAGCACGACGTGACTTACTCCAGGCCACCAAGCAGGTGACGAAGGAGCTCATGGACCTGCTGAACCAGGACCGGTCGCCGCTGTGCAACACGCGGCCGCCGCACCTGCTCGAGCCGGCGATACAGAGGCACCTCACACACTTCTCGCTCATCTCGCACGGCTTCGGCGGCCCGGCCATCGTCGCCGCGCTCACTGCCATACAAAATTTCCTCAACGAGTCGCTCAAGCATTTAGACAAATTATATCCTCAAAGTGGAATGGTATCCTCGTCCATGGACAAAACAAAAATGGACCCCGACATCAAGAAGTAA
- Protein Sequence
- MLSHGGFSYGGGERRADYGAREQHELALHHALHSAEEAPVRLITVTSSSPSPAAWLLAERTTARASSTSWPCTTRCTPPRRRRVTIQKYYESQWRSSCAHVWGVALIVKAYSMKGRDGLGGSGSCAPNDVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRSKYKVTVAEVQRRLSPPECLNASLLGGVLRSKYKVTVAEVQRRLSPPECLNASLLGGVLRRASPHIDRQPFRSTESEPECLNASLLGGVLRRAITANDLNLTPLNLHDRTPQKNEEQIDRHTKINEWTQKSLHGRHRQDLCQPHVDKDASNEWLNRGELFPETEGFMMAIQDQVIETRNYKKYIIRNHNLPTDMCRKCNSASETIQHITGACRAIVQTDYKHRHDQVASIVHQKLAEMYKLLTQPPIAYYKYSPEPVLENQTHKMYFDRAILTDPEAVHLARDFGYVCETEFPARALAEYLARQYAEHDARRRRDLLQATKQVRPLTVSPSKAVHLARDFGCVCDEAVHLARDFGYVCETEFPARALAEYLARQYAEHDARRRRDLLQATKQVRPLTISPSEAVHLARDFACVRDGEYLARQYAEHDARRRRDLLQATKQVRPLTISPSEAVHLARDFGCVCETESTSRGSRARRDLLQATKQVTKELMDLLNQDRSPLCNTRPPHLLEPAIQRHLTHFSLISHGFGGPAIVAALTAIQNFLNESLKHLDKLYPQSGMVSSSMDKTKMDPDIKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -