Nmel005146.1
Basic Information
- Insect
- Nomia melanderi
- Gene Symbol
- Trerf1
- Assembly
- GCA_003710045.1
- Location
- NW:6583273-6988263[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7 2.8e+03 -2.4 0.2 29 42 1148 1161 1146 1162 0.88 2 2 9.4e-12 5.7e-09 35.0 0.0 2 46 1314 1358 1313 1358 0.96
Sequence Information
- Coding Sequence
- ATGACAGCCATCAACTCGGGTCCGGTCGGGGAAGTGGGCGGCGTCAGGCTGCCGCTGCAGTCATTACATGGGTACGGATCTGTGTTCATGTACTCTGCGTCGACGAGTCCCGGGGGTGGAGGTGGTCAGGGTGGCGGAGGCGGAGGTGAAGTCACCCTCCGCCTCCGCGAACCCGAGGACATTCCCGAAGAAGTTCTTGCACGCTTGGAGGACACCGCCACCCTCTCCATCTCCCTTCAAGGTGATGCTGTTCTGAGGCTAGGAGCTGCTGGCACAGGAGACTTCGGCAATGGGAACTTGGAGTTGTTCGATAGTGAGAGTGGGCCGGATCTCACACTATCACCTCAGACCTTCACGTCGACGGCAGAGGCCTTCATCAATGACAATAGTGATAGTCTTGGTGTTCCAGGAGACAACGATACGGGTAGCAGTGAGGAGTCGAGACCTGGCGGCGGGGATCCTGGAAAGTTGGGGGTGAAGAAACCAAGACCGAAGGCTTCGTCGCCCAACCGACAGGGACCACAGCAATGCCAGGTCTGCGGGAAGGTGTTCAACAACGCATCGGCGCTCACGAAGCACAAGCTGACGCACAGCGACGAGAGGAAATACGTGTGCACGATGTGCGGCAAGGCGTTCAAGCGGCAGGACCACTTGAACGGACACATGTTGACCCATCGAAACAAGAAGCCGTACGAGTGCAAAGCGGAAGGATGTGGCAAATCGTATTGCGACGCGAGGAGTCTGAGGAGGCACACGGAAAATCACCATGCCGGTAGCAAGGTGATCGAGAGCGTGAGTCCTAGCAGTCCGACCACTGGTCCTCATACTCCTAACACACCGGGTAGCAATCCTAGTACACCTAGCACACCAGGTGCGACGTCAACGTCGAATGGCCATGGACATCCGGCCTTGAAGCAATTGCTCGCCACGGAACCTACGCAGGCGCAACAACAAAAGAGTGCTACATCTCCTGGAGCTAGTAACGATGGCCTCACGAAACAACAATTGGAGCTTATTCAACAGATCATGCAGCAGAcccaacaacagcagcagcaacaacaacagcaaacAACCgcgcaacagcagcagcagcagcagcaacgtACCACCACGTCAGCTACAGTCACCGCGCAAATTCAGAAACCGCAAAAACCGTCCGTCAAGCCTACAATCTCGTCCAGCAGCGTCTCGAGCAATTCTGGAAGTTCGAACGCGACCAACAACGCCAGGTCCAGCCCGAAGCCCAAAGTCTGGAGTCACGTACAGcaacaacagcaacaggCTCAGCAGCAAgcgcaacaacagcaacagcaacaaccgCAGCAGCAACACCAGCAACAGCATCCGCAGGCTAACTCACCGGGGAGCGGAAATGTAGGAAAAAGCAGTCCGTCGCCGGGAAATTCAGCGTCCCCCGGCACTGTGACGGTAACCAATAAAACGCAGACAGAACCGAAACCAGTCGAGTGCAATCTCTGCCATCGAAAGTTCAAAAACATACCGGCTTTGAATGGTCACATGCGACTCCATGGTGGTTACTTCAAAAAGgATGCTGAGAACAAGAAAAGCGAGAAGAAGGAGGTCGTCGGGCCGCCATTACAGACTGCGTCTGTCAGTGTGAGAGCACTCATCGAGGAGaaaattatacagaaaagaacaACTGCAGCAGACACGAGCACGAATCAGCAGCCACGTACGACTACGACTGTTTTCACTACGCAAGCAGACAACGCGTCGCAGGTCGCCGGTAAAACGAGCTTCGCGGTACCAGCACCGCCGCCATTGGCCTCTGCGGAGAAGGTACGCAGACTTTCCGATGGCGAACATTTCCGGCAGCCAAACGTCACCGTTGGCGGACATGCGACCGTGCAGAAACAATTACAGGAAGCGCAAACGCAGGCACAGGCGCAGGCGCTGGCCGACATGATTTTGAAGGGTACCACCAAAATGGCTGTGAAGAGAGCAACTTCCGACCCCGGGCAAAGATTACACTTAACGTACCAAACATCCGTACAACCGACGACCAATCAAccgcaacagcaacaacagcagcaacagaaCAACCAGCCCCAAACCCAGCCAGCAGTCACTGATAGTTTCTCCATGACAGGTTACTCCGACGATGGCGGTTACTTCAGCCCTAGTCTTCAAGATGAAGTGTTCCAGCAGGTCACCGCGGTTCCAGATAGTGTCCTGCTTCATGCTACCCAATTGGATTCCCTTCAGTTTCAGACGGCAAGTCTGCTCCAAGAACAACCCACGGAGCAGCTGCAAGACATCACGCTAGAAGACCGCTACTCCTCGCAGCACACGGTCAACCCAGATCTGCAGGCCCTAGTGAACTCTCCATTGCCGGACTCACTAGCCGAGTTTAGCACGTACGGCGCCCAGTACACGGAAAGCCCGCACACCTTGCCGACACAGTCCCCGCTACCATCGCCGCTGACCAGACATGACAGTCCGAGTTTCACGTATCCGACGCCGCCGGCTAGCCAGGAAGGGCTTCTAACCGGAAGCCTGCCTCTGTTAAGCCCGCAAGAAGACCCGGAGAGTGTAAGACAGGTCTCGTCGCCTCTGTCTGCAGCGTTCTACACGTCAACAATGTCGTCCGCGGCGGCAGTGGAGGAGGCACTAAGCGAGGTGTTGCCGGGTGAATCGGATGCGGACGCAGATCTGTACGGGTCCGGTTCACCGAACCCTCACTCGCCACTGCCAAGCCCGTTGTCGGCGACACCGGCTCCGTCACCGTTGTCCTCCCTGCCGCCGTCCTCCGTCTCGTCCCCCGGACCGGTTTCCTTCACCGGAACTAGCTTCCCAGTGTCGCCCCATCACGCGCTACAAAGCCAGATGATGCCTAACTCGGAGGACCCGCTGCTCTCGTCCACCCCGAAGGATTTCACCACGGCTAGCCGCAGACGTTTCGAGTTCCAGTCGTACAAGTTCATCACCAGCCAGAACCTCGTCGACTTCGGCCTGGGGAACGGTAGCCTGGCTGGTATCGTCGTAGACAACAACGGCGAGTTCAAGCTAATTCAAACCGCTGGCCTGCAGAAGACGAACGTCTTGGTGCAGACTGGTTCCTTGAGTCCCGCGCTGGCATTCAAGAAAGAAGTGCGTCTGGCGACGCCTAAGGTGGAACCTGTCACCGTGAACATCGGCCTCAACGTGCAGACGAACCATCAATACAACGTTGGCCAATTTAATCAGCAGCAGGTTGTCAACCCTACGAAGTTTCTTATACAGACGAACGCAACGAAGAATAATAACATGAGACAAAAGACGCTCAGCGGAAACCTGCCGGTGCCCGTCGAACAAATCAAAGAGGAGCTACTGGACGATGATGTCTTTCTTAATCCGAGCAGCATACCGGCTGGCAGTCCAGTTAGACACTGTAGGAAGAGGCCACGTATAGAAGGTGGCCTGTACGCCAGCTCGTCTCATTCGTATCCATCGAGATTGAGGAAGGCTTGCGATAGACACTGGGACAGTAGCTACACTCCGCCGCCGATCTTGGATCCCTCTCGGCCTGGGCCTGGCTTGTACGCCCGGCTCCATCAGTTCGAGAGAGATTCCGATTTTAGTTCGGATGACTCTCAAGGAAACGATGGACCGCCGCCGAGGATCAACATTGGAACTAGGTATCAGGCTACGATACCGCCAGTCGGCAGCGATGGGGACAGAGGAAAAGGGGAACCCGAGGCTGATCACTTGCTGTGGGATCCTGGTATAAATAATGTGCTGACAGACAATGAACtCGAGATGTATTTGCAATTCGCGTGCTGCGCAGCGGTACCAGGTGGAGGAAGAAACAAAGAATACGCGCTTCATCTGCTGCATATGTGTAGAGGAAACATTCATGAAGCGATGCTGAAGCTGATGAGACCAACACCAACATTGCCAGCAGGTCATCCGCTTCTGAATTACGAGTGTCAGGAATCCGACCGATGGACATCGCAAGAGATGGACGCGTTCTATCAAGGCCTCCTGAAGTACAACAAAGACTTCTCCGCGATCTCGCGGGACGTCGGTGGCAAATCCGCGAAACAGTGCGTGCAATTCTATTATGTATGGAAGAGACTCTGCCCGGACGAATACAAAAGACTGCGTGTCCGTCATGGAAAACCAAAGATTAAGACAGAAAACAGAGATTGTAAGGATACGAGGGAACTTCGCGATGCCATAGCATCCGTGACTGAGATGGACTTCAGTGAAGACAAATCGATCCTCCATCGTACACTGTTGCAGACCAATGAGAGAGAAAATTCAGCTACTCTAACCACCAGCGACGGAGAGCTGAGATTATTCGCGTACGACTGCCCTGATAGCTTTAGCGGAAGTGTAACAGTAACGATGGCCGGGAGCACCCAAACCGCCCAAACCGGCAATACCGGCCACGCCACAGTCAACACCAACTCACAAACTCACACTAGTTCTGAGCAACAACTACCCGTGCCCACCCCACTTCACTACCCCTGCAAGATTTGCGGGAAAGTTTTCAACAAAGTGAAAAGCAGAAGCGCACACATGAAATCTCACAGGCCAGTGCCATCGCCCGATTCAACGGGTCAGGAATCTAAGCGACCAGtacagcaacagcagcagcaacaacatcACCAACACCACCACCAACATCAGCAGCAACATCAACAAACAAGGTCACAGCAGCAGTCGCAGCAGCAGACCAGTCAACAGCGTCAACAACAACAGCTGCAGCTGCAGCAGCCATCGCAGCAGCAACAACCGAGCAGCGTATCACCACAGACACCAGACTTCAGCAATCAGCAGCCACTGTCCGCAAGCAACGGCGACACCGGCGCGCAGAGCACGGCGCATTTATGGCACAATCCGACGCGGCTCAGGCCACCATAG
- Protein Sequence
- MTAINSGPVGEVGGVRLPLQSLHGYGSVFMYSASTSPGGGGGQGGGGGGEVTLRLREPEDIPEEVLARLEDTATLSISLQGDAVLRLGAAGTGDFGNGNLELFDSESGPDLTLSPQTFTSTAEAFINDNSDSLGVPGDNDTGSSEESRPGGGDPGKLGVKKPRPKASSPNRQGPQQCQVCGKVFNNASALTKHKLTHSDERKYVCTMCGKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHAGSKVIESVSPSSPTTGPHTPNTPGSNPSTPSTPGATSTSNGHGHPALKQLLATEPTQAQQQKSATSPGASNDGLTKQQLELIQQIMQQTQQQQQQQQQQTTAQQQQQQQQRTTTSATVTAQIQKPQKPSVKPTISSSSVSSNSGSSNATNNARSSPKPKVWSHVQQQQQQAQQQAQQQQQQQPQQQHQQQHPQANSPGSGNVGKSSPSPGNSASPGTVTVTNKTQTEPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAENKKSEKKEVVGPPLQTASVSVRALIEEKIIQKRTTAADTSTNQQPRTTTTVFTTQADNASQVAGKTSFAVPAPPPLASAEKVRRLSDGEHFRQPNVTVGGHATVQKQLQEAQTQAQAQALADMILKGTTKMAVKRATSDPGQRLHLTYQTSVQPTTNQPQQQQQQQQNNQPQTQPAVTDSFSMTGYSDDGGYFSPSLQDEVFQQVTAVPDSVLLHATQLDSLQFQTASLLQEQPTEQLQDITLEDRYSSQHTVNPDLQALVNSPLPDSLAEFSTYGAQYTESPHTLPTQSPLPSPLTRHDSPSFTYPTPPASQEGLLTGSLPLLSPQEDPESVRQVSSPLSAAFYTSTMSSAAAVEEALSEVLPGESDADADLYGSGSPNPHSPLPSPLSATPAPSPLSSLPPSSVSSPGPVSFTGTSFPVSPHHALQSQMMPNSEDPLLSSTPKDFTTASRRRFEFQSYKFITSQNLVDFGLGNGSLAGIVVDNNGEFKLIQTAGLQKTNVLVQTGSLSPALAFKKEVRLATPKVEPVTVNIGLNVQTNHQYNVGQFNQQQVVNPTKFLIQTNATKNNNMRQKTLSGNLPVPVEQIKEELLDDDVFLNPSSIPAGSPVRHCRKRPRIEGGLYASSSHSYPSRLRKACDRHWDSSYTPPPILDPSRPGPGLYARLHQFERDSDFSSDDSQGNDGPPPRINIGTRYQATIPPVGSDGDRGKGEPEADHLLWDPGINNVLTDNELEMYLQFACCAAVPGGGRNKEYALHLLHMCRGNIHEAMLKLMRPTPTLPAGHPLLNYECQESDRWTSQEMDAFYQGLLKYNKDFSAISRDVGGKSAKQCVQFYYVWKRLCPDEYKRLRVRHGKPKIKTENRDCKDTRELRDAIASVTEMDFSEDKSILHRTLLQTNERENSATLTTSDGELRLFAYDCPDSFSGSVTVTMAGSTQTAQTGNTGHATVNTNSQTHTSSEQQLPVPTPLHYPCKICGKVFNKVKSRSAHMKSHRPVPSPDSTGQESKRPVQQQQQQQHHQHHHQHQQQHQQTRSQQQSQQQTSQQRQQQQLQLQQPSQQQQPSSVSPQTPDFSNQQPLSASNGDTGAQSTAHLWHNPTRLRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01122371;
- 90% Identity
- iTF_01071207;
- 80% Identity
- iTF_01071207;