Nmel004039.1
Basic Information
- Insect
- Nomia melanderi
- Gene Symbol
- SNAPC4
- Assembly
- GCA_003710045.1
- Location
- NW:2015278-2021977[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.096 58 3.0 0.1 3 18 164 179 164 180 0.94 2 5 2.8e-11 1.7e-08 33.5 0.7 1 45 263 309 263 310 0.95 3 5 1.2e-06 0.00074 18.6 0.3 4 42 320 362 319 366 0.94 4 5 1e-13 6.2e-11 41.3 0.0 1 45 372 417 372 418 0.97 5 5 9.8e-08 6e-05 22.1 0.1 3 37 427 461 426 466 0.85
Sequence Information
- Coding Sequence
- ATGGATAAACTAACGGGTGATGATGATTTAAACGAGATAGTATTGCTAGAAAATACGTCTTctgaattaaataatgaacacGATTGTCCATATATTCCTACAGTAAAAGATGGATCGGTCTGTACGTCGGAAGTGTTTACTAAAGATCCCACGTTACAAAGAAAATCTAAATATCAAGAAGAAAATGTGTCTTTGGAGTGCAATATTGACGATTGTAACAGTTTACTAAATTTCAACAAGCAgatcatttcttttttgatCGATGTAAAAAAACACATAACCTATGCTCttcaaaaatgtgaaaaaaaaTTGACGATAATAGAAACGAACCTTCAAAAGCATACAACTGGAGACACAAAGGCTTTAATTTGCAATGCTGGCATGCCTTACTTTAAGGACAGGTATTATTTTTCTGCTCCTAACAATgacgatgaaatattaaaggaaaattataaagaattacATCTTAGAAATCTTCCTAAAGTAATACCATGGACCATAAAAGAAAGGAACACATTGCTTAAAGCGGTACAAGAAGAGGCTACTGCGAgctctataaaaattgaacataTCAGGTTCGAATCGACATGTAAATCTACATGGAAAatcaataaagaaacaaaaacagGAAGAAGATCTTCGGCCAACGACTCTGTCGAAGTGGCTAGCTCATTACAAGATAGAGACTTCGATTGGTTTAAAATATCATCTATTTATTTCGAGGATGTACATTCGCCGCTCGATTGCAGAGTAATGTGGAATGTGTTTCTTCATCCAGAAATCAATAAAAGTTGTTGGTCAAAATCGGAAGATgtcaaattaaaagaaatcacaAAACAGCACAAGTTTCAAAACTGGGATAATATTGCAgaagaattaaatacaaatcgTAGTGCTTACCAATGTTTCATCAGATACAATACAATAAGAAAGTTGCCTAAAATCAGAAATTGCATTTGGGAACATAGAGAGGATGACAGACTcttaaaattagtaaaaatatttcagatcgGTAACTTTATTCCATGGGGTGAAGTAGCCAGTTGGATGCCGAATAGAACTAAACAGCAAGCATATTTTCGATGGACTTATAGCTTGACACCGTATTTAACCAAAGGCAGATTTAGTAAATCCGAAGATAATCTTCTAAAAGATGCTGTTACTAAGTATGGTAcaaattttcgtaaaatatcaGCTGCACTGATGCCTAATAGGTCAACGGTTCAACTTCATGACCGTTATCAAACCTTGACTAGCAACCAAATTGAAAACTGGAATGTATGGTCACTAGCAGAAGATTCAAAATTGTTGGAACTTTTTGAATGCTTTGGTCCAAATTGGTCTAAAATATCTAAAGCATTTACATGTAAAACAAGAACCCGATTGAGACATCGACATGCTgctttacaaaaatatcttaGTAAAGGTATATCTGTTTTTGACTTACATACAGACTACTCGAAGCGTAAGAATAAAGAAGCAGagcaagaaaagaaaaacgaaaaatctgATCAAATTCAGTTCAACCTTAATAAAGATGTGTCCAATAGCAGTTGCAATAATGATATCgataaagaattaattgagTATTTCCATAAAGAACAAACAATAGAAAGATCGTTCAACCACAGACAAAAACTTTACAAAACGGATGAACCAAAGTTCAGTGCAAAAGAATTATACGATATTTTACGggtattaaatgttaaatttcatatGCCTGATGAAATTAACAATTCAAAATTAGATGACAGACACAAACAACTTTTCTATTCATTGAaggaatatataaatgtaaggGATGACAAGAAAAGGCAACATGCGGTAATAGATAAATGTAGCTCACTTATGTTCGGAGTAAATCACATTGTAAAAAAAGGTACTGGTGATGTATTATCAGAATCATTTGAATCACaggtaaaattgaaatacccGAATAAAACACAATGTATCGATTATCACATGAACACAAAGAATGCTTTCTTAGTTGAGAAAACAGCAGTCTTTAACACTCCAGACTTTATGATTTCTCATATCGGCGGTAACGAACAAGAATTACAGTTTGAAAAACTTGCTCGATTGTTTATAATGGATACCTGCTGTAAGGATAAACACTATACACGGAACATGAAAAACTCTAATGCATTTCCATGTGGAATGTCTTTAGATCCACATAACAATGGGAACAGTGACAATAGAAAGAAATTGGTACATAACGAGTCAAAGGAAGTATCGATTGTACCCTCCAATACTTGTTCTGATATTTCTTTGGTACAAAGCAACCTTGGCGATCGCGTAAATTACTCAACGTTACAAAGCGAGAATTGTGAAAAATTTCGCGATTTCACGACAAAAAACAACACTCTGTTTAATGtgtttgaaaaaatacaaGAGTTTACACCTAATTCCACTGTAGATACATCTAAAATTCAGTATTCGTCTGTGATCGAAACGGCACATGCCACTTTACTCGGTTTCAAacatttgatatatttaaaacagttAAACAAAGAATGCAATGATCCACGTGAATTTTGTATGATATCGAAGGGATGTCAGCGATCATTGAATATATTGATAACACGTTTAGAGCAGTTATTTAGGTACCCGATTGGTTTATCGAAAACCACGTTACCCAAAGTTTATGTTATGGATACTTTTTCATACGATGACGTTACATCAAAAAGAAAAGCCACTGAAACACCAACAATATTAAAACCGtataaaataggaaaatttcGATCATACGATAAAAACagcagaaaaatataa
- Protein Sequence
- MDKLTGDDDLNEIVLLENTSSELNNEHDCPYIPTVKDGSVCTSEVFTKDPTLQRKSKYQEENVSLECNIDDCNSLLNFNKQIISFLIDVKKHITYALQKCEKKLTIIETNLQKHTTGDTKALICNAGMPYFKDRYYFSAPNNDDEILKENYKELHLRNLPKVIPWTIKERNTLLKAVQEEATASSIKIEHIRFESTCKSTWKINKETKTGRRSSANDSVEVASSLQDRDFDWFKISSIYFEDVHSPLDCRVMWNVFLHPEINKSCWSKSEDVKLKEITKQHKFQNWDNIAEELNTNRSAYQCFIRYNTIRKLPKIRNCIWEHREDDRLLKLVKIFQIGNFIPWGEVASWMPNRTKQQAYFRWTYSLTPYLTKGRFSKSEDNLLKDAVTKYGTNFRKISAALMPNRSTVQLHDRYQTLTSNQIENWNVWSLAEDSKLLELFECFGPNWSKISKAFTCKTRTRLRHRHAALQKYLSKGISVFDLHTDYSKRKNKEAEQEKKNEKSDQIQFNLNKDVSNSSCNNDIDKELIEYFHKEQTIERSFNHRQKLYKTDEPKFSAKELYDILRVLNVKFHMPDEINNSKLDDRHKQLFYSLKEYINVRDDKKRQHAVIDKCSSLMFGVNHIVKKGTGDVLSESFESQVKLKYPNKTQCIDYHMNTKNAFLVEKTAVFNTPDFMISHIGGNEQELQFEKLARLFIMDTCCKDKHYTRNMKNSNAFPCGMSLDPHNNGNSDNRKKLVHNESKEVSIVPSNTCSDISLVQSNLGDRVNYSTLQSENCEKFRDFTTKNNTLFNVFEKIQEFTPNSTVDTSKIQYSSVIETAHATLLGFKHLIYLKQLNKECNDPREFCMISKGCQRSLNILITRLEQLFRYPIGLSKTTLPKVYVMDTFSYDDVTSKRKATETPTILKPYKIGKFRSYDKNSRKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -