Basic Information

Gene Symbol
Arid4b_1
Assembly
GCA_003710045.1
Location
NW:1628279-1638222[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.6e-28 8.5e-25 86.0 0.1 1 89 307 394 307 394 0.95
2 2 5.4 7e+03 -3.4 0.1 28 58 1345 1375 1329 1383 0.64

Sequence Information

Coding Sequence
ATGCTGGGAGACGATCCGCCGTACCTATCAGTGGGTACGGAGGTTAGCGCTAAATACAAGGGTGCCTTCTGTGAAGCAAAAATAAGGAAAGTGGTACGATCAGTGAAATGCAGAGTATCTTATAAACAAGGTTTGGGCACTGCAACTGTAGCTGATGACCAGATAAAAGGAACTTTAAGAGTAGGTGCATCCGTTGAAGCCAGACATGgagataaaaaagaatttgtgGAAGCTACAATCACCAAAATCCAGGACTGTAGTCAATATACTGTAGTTTTTGATGATGGAGATATTACAACATTAAGGAGAACTGCGCTATGTTTAAAGAGCGGACGACATTTTGCAGAGAGTGAAACTTTGGACCAACTTCCTTTAACACATCCAGAACATTTTGGAAACCCAGTAATTGGAGGTAGAAGAGGACGACGGTCTAGACAAGCACAAGATGAAAGTAGCGACGATGAAGACAGCCCTCCACGAGGAACTCGTGACTCAGGTTCCAGTGGCACAGGGAAGGAAGGTATGGAAACAGAACCAGAAATTGGACGGGTTGTATGCGTGGAACTTggagataaaaagaaaaaggataaTTGGTTCCCTGGGTTAGTGGTTGCACCAACTGCTCAAGATACAGTAAGAATTCGAGTGAGAGATGACTATCTTGTGCGGTCGTTTAAAGATGCACGATATTATACAGTTCCGAAGAAAGAAGCCACTGAATTCACAAAGGAACTTGTCAACAAAGTTGAGAATAGCACATTGAAGGTTGCAGTAGAAAAGGCACTGCTATTTTTAGAGAAGAATGAGTTGCCTCCCCATTGGGATAGAGATTCTCTTTTTGGACACACTGTATCAAGTGGAAATAGTGATTCCGATGGAGAACTTGATTCAGATagTTCAGATGACGAACCGCGTGAAGAAAAAGATCATTTTGTGGCacaattgtataaatttatgGATGATCGTGGAACACCTATTAATAACTGTCCAATGATCGGATCTGAGGACATAGATTTGTATAGGTTATTTCGAGCCGTTTACAAATTGGGTGGTTATAATCGCGTAACAAATCAAAATCAATGGAAGCTGATAACGCGCCGTCTAAGCTTTACAATGCAAAATTCACCATCGACGCACAATTTGGTTAAACAGGCCTATAAGAAATTCTTACACTCGTTTGaagatttttatagaaaattaggTTGTACTATGGTAAATCATCCGAGAGGTACTATACGCAAACAACGTCCTGGTAGAAGTCTGATTAGAGATAAAGACAGAAATACACCTGTACCACCACAAGTGACGGTAGCTAAAAGTgagaaagaagaggaagatAAGAAAGTAACAGAAGatgaaaagaaggaaaagaaagaagtaaAAAAGGAACAGGTGAAGGAAGAGGAAGTTgtcaaaataaagaagaaggATGAGTTTGAAGAAAGTGGCAGTGGGCAGGAGAGTGATGTGAATGTGGAAGGCGAGGCAGAGTCATCCAGCAGTGAGAAATCTCAAAAGATTTCAATGTCGTTAGCATTGCAAAATAGAGGTAAGTCTAAAAGTAAAGAAGATTCTAAGAAAAAggtaatagaaaagaaaaaaaatgagcctaaaaaacaagaaaaaaaggatGATAAAGCGAAAGAGGAGGATGCTGCTAAAACGAGGTCTAAATCGAAAGATGATACTGTAAAAAAAACATCTTCTGAAACTAGGGAAACGCGAACTCCATCCAGAGAATCGGACAGAAAAACTTTAACCAAGCAGAGGCGTCTAACTGATGAAGAATTGAAAAGACGGGGCAGAAAGCGTAAAGAGTATGAGGCAGAGAAGTCACGATCCGATGAACAATTAGCAGAGTCTGCCCCTTGCTATAAGGGTCCTGTAGAATTAGGAGACAGATTAAAAGTATATTACGGACCTACCCATGAATCGAAAGTCACGTACGAGGCGAAAGTTATTGATATGGAGAAGGATGGTACAGAGCCAATGTATCTTGTACATTATACCGGGTGGAATACAAGATACGATGAGTGGATCAAAGCTTCGAGAATAGCACAGAACTTTACACAAGCGCAAGGTAGAGTGAAACGTGTTAAAGCTAGTTCACGGCCACAAACACCTAGTACGAATTTATCCAATAATGTGAACAAATCAACGAAGATTGTATCTAACACAAGTTCGAATGCATCTCAAAGTCGTCGTCGAGCTCAGAGTGTAGCTCCTACGACGACGGTTGTCTCATCGATCACTATGAAAGAGgtaaagaaagaagagaaggAAAGGGACAAGGAAACATCTCAACCGGCTAGGTCTACAACTCCTCTGTCTGTCACAAGTTCTAGCTCTAGAACTAAGAGTCCAGCAACTCCAGCGAATAATCGTCAAACTCGAACGACAAGAAACACTGATGTACCTGGTATAGAACACAGACGACGCACGAGGAGGACGTCTGGTCATACAGATATATCGATTGCGTCGGAAACTGAAGATAGCGAAGTGTACGATTCTGACGCTACGGAACCTGAACAAACAAGAACTAAATCCAAAGGTGTAGAAGAGAGAAAACGTAGGGATGCGAAATGTAGAACCGAGGATAGAATAAAACCTGACGAGACCAGCGATGGTGAGGAAGATAAAGATAATTTGGAAGAACCACGAAGAGGTAGGCGTTTAAGAAGAACGATTGGTAAGTCACAGGGTATAAAATCTGAACCTGATAGCGACGAGGAGCAACCTAAAGGTCGGGATTTCGACTTGAATCAGATACGGTCGGAATTAAAAGGTTTCGATAAGGCAGTTAAATTAGAGCTTGTCAGGATCGAGCCAGATCCAGaggatgaaataaaaatagaagaaaaagaaaatgttgttTTAGTTTCACCGAAATTAGAGAAAAATTTGGAACCGAAATTAGAAACCACTCCTGAGCCTAAGGCAACGGAGAGTACGGAGGATATATATGAATTTAAAGAACCAGAACCATTTGAATTTGAAGTGCGCAATAAACGAGATACCAGCGGGGAAAAAGATAAAGTAAAGAAAAGAGTATTTGAGGAAGAACCAAAAAGTCCTAAAAAGAAGCAAAAAATAATTGTGTCGCcggttataaaagaaattaaaccaGAAATAGATGACTCGAGGAAAAAAccgaaaaaattatttagtaaaagaATTGATGATATCACAGAAAATCAATCAATTCACAAACCATCGCAGTCTGTATCTTCAAGTACGTGTGAGGAAGTATTTGATAAACTGTGCGAATCACCATCATTTAATCAAGTGAAAGCTGCTCCAGTTATGGAAGAAACTGGTAAAATAACTAATGGTATAGATCTGTTATTCAGTGACTTACCTGGCGATGATGATGGCGCACACGATGATTCGGAAGATCGATTGATAATATCAGAGGCAGAGGTTTCAGAAGCGGAACAAGAAAACTTATTTTCGTATCAACAAGAAATGTTTTCTACTAATGAGATGACCGATTCTTTAGAATCGACTAAAGAAGATACAAATTCACAGGTTGAAACGGCAAGAGAAGAATTATTACCACCAGTTTCAAGCAAGTCTGAGGTAGTACCTGTAGAACAAAAACAAAGCATTAAGATGTCTCCATTACACAGACAATCCCCAGAATTAAAACCGCTTGATACAAAGCTATTAGACATTACACCGGTTTCATCTCCAATAGTAGCAGTACCAGCGCCAATTAGTGCAAGACTGCCGGCCACATCCACGATAGAAGAGAAGCTTTCAGCGGCAATGGCTTtccgcaataaaatcaaagaaattaaaaaagacgACGATGTTCCCGAAGTCGTATGGAAACCATCAAAAGAAATTCCTAAAAAAGTAGATACCATAGTTATACAGAAGAATAAAGAGGAACAGAATGGGCCTAAAATAGATATTGAGAACAAAAAGCGGGAGGAAGAGGAAATTGCAGTAAATAACGAAGAACCGTGTAGAGAAATAATGCGAGTGGTAATCAAGCAGAAGGAAGAAGAACTCCAACAGTTGAAGTTGAAGAAAGAGGTAGAGCTGAAGAAATTTGTTGAAACAAAAACAGAACATAAAAAGGTACAAGAAACTAGCAGCGAAGAGGAATGGAAGCATATTGAAACTGAAGAGTCCAAAAAAGCGGAGGATGGATTTAAAGAACAGGACtttaaagaaaaggaaaaagaaaagcgTAAGAAGATAGTTGCTCAAGATATTGTGGATTCTGCGGATAGTAGTGACTCTGAGCAAAGGCTGGTAATTGATAACGAAGAACCTCAAGATGCAAAAACACCAACAAACTTCGATGTGAAATTAAGAGCAGAATTAGATAGACTTCAAGATACGCAGGAAAGGTATTCAAAATTACAAGTGCAGAAATCCGTACAACAATTGAAACATCAACAACATGAATGTGTTACCGAATGCAAAACGGAGAGTATATCCGTTACAAAGGGTGACGAAGAAGGAGAAGCAATCAGTTCTCTGTTGTGCGAGGAAGAAATACCAGGTTCACCTGCACCTGTTTCTGAAAGTATTGAACAAATAAATGCTGGCCCATCGTGTTCCCCGCCAAAAGTTGAAACAACAGAAAGTAGTATAGTACTTATGGAAATGCCTTTCGCAAGCGCTCCCACTTCAGGCCAAAGTACTACCAGCAGTACTGTTGTCACTTTGAGTATGGCGCTGCCGAAAACTCTAGAGACATCCGTTCCAGTTTCTTTGCCGATGCAACCAAATCCTACTTTAGGTGTGAGACAACAATCGCATCATCAGCATTTGCCTGCACTGATGCCAGGCCAGAGGCGGGAAAGTAATGAGGCAGCACCTGTAATGGACAATACACCCCCAACTACGCCGGATTCTAGTATTTCTAATATCTCTGGATCTCCAAGAGAAGAAAGAACAGGTGGTTCGTCACCGATTTCTGAAGATAACATGAAGTTAAATCGTGATAGTTCTGAAGCGGACAACGATAGCGGTGGTAAAGGTCCTGCGTTTAGCGAAGATGATACATTACCCAACGCTGAAGGAAACTCAGCGGACAGAATGTTGAAGCCACCGGCGAAACGTTCCGTGGAAGAGACACAATCTCCCAAAAAGCgaaagagaaatagaaaacATTCAGAATGTGATAAGAATACTTCAAAGAAAACTGGGAGGCATAGTGGTAGGCATGGTAGACACGGTGTTGGAAGCGACAGCGACGATACGAGTGAGGGCTCGAATTTGTGTAGCGTCAACTCAACATCTGCGAATCATACGAATATTGCTACCACAGTAGCAGATCTCAGTAATTATTCGTCGAGATCGCCACGACCcacgaaatataatttctatgtGGAATTAGACCCTGAATTGGATGGAAGTCAAAGGATAGCTGTGTTACAACAGAAATTAGCTGAATTACGTAAAACGTACAATGCAGTAAAAGTTGAATTGGCCGCCATTGAAAGACGCAGAAAAAAGTTACGGAGAAGAGAAAGGGAAgTATGGAAAGAAAACaacatgaatttattttcagctATAAAGGCAGCTAAAGCAGAAATGCAACAGGCCTGTTCGTGA
Protein Sequence
MLGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVSYKQGLGTATVADDQIKGTLRVGASVEARHGDKKEFVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDESSDDEDSPPRGTRDSGSSGTGKEGMETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELVNKVENSTLKVAVEKALLFLEKNELPPHWDRDSLFGHTVSSGNSDSDGELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGSEDIDLYRLFRAVYKLGGYNRVTNQNQWKLITRRLSFTMQNSPSTHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGTIRKQRPGRSLIRDKDRNTPVPPQVTVAKSEKEEEDKKVTEDEKKEKKEVKKEQVKEEEVVKIKKKDEFEESGSGQESDVNVEGEAESSSSEKSQKISMSLALQNRGKSKSKEDSKKKVIEKKKNEPKKQEKKDDKAKEEDAAKTRSKSKDDTVKKTSSETRETRTPSRESDRKTLTKQRRLTDEELKRRGRKRKEYEAEKSRSDEQLAESAPCYKGPVELGDRLKVYYGPTHESKVTYEAKVIDMEKDGTEPMYLVHYTGWNTRYDEWIKASRIAQNFTQAQGRVKRVKASSRPQTPSTNLSNNVNKSTKIVSNTSSNASQSRRRAQSVAPTTTVVSSITMKEVKKEEKERDKETSQPARSTTPLSVTSSSSRTKSPATPANNRQTRTTRNTDVPGIEHRRRTRRTSGHTDISIASETEDSEVYDSDATEPEQTRTKSKGVEERKRRDAKCRTEDRIKPDETSDGEEDKDNLEEPRRGRRLRRTIGKSQGIKSEPDSDEEQPKGRDFDLNQIRSELKGFDKAVKLELVRIEPDPEDEIKIEEKENVVLVSPKLEKNLEPKLETTPEPKATESTEDIYEFKEPEPFEFEVRNKRDTSGEKDKVKKRVFEEEPKSPKKKQKIIVSPVIKEIKPEIDDSRKKPKKLFSKRIDDITENQSIHKPSQSVSSSTCEEVFDKLCESPSFNQVKAAPVMEETGKITNGIDLLFSDLPGDDDGAHDDSEDRLIISEAEVSEAEQENLFSYQQEMFSTNEMTDSLESTKEDTNSQVETAREELLPPVSSKSEVVPVEQKQSIKMSPLHRQSPELKPLDTKLLDITPVSSPIVAVPAPISARLPATSTIEEKLSAAMAFRNKIKEIKKDDDVPEVVWKPSKEIPKKVDTIVIQKNKEEQNGPKIDIENKKREEEEIAVNNEEPCREIMRVVIKQKEEELQQLKLKKEVELKKFVETKTEHKKVQETSSEEEWKHIETEESKKAEDGFKEQDFKEKEKEKRKKIVAQDIVDSADSSDSEQRLVIDNEEPQDAKTPTNFDVKLRAELDRLQDTQERYSKLQVQKSVQQLKHQQHECVTECKTESISVTKGDEEGEAISSLLCEEEIPGSPAPVSESIEQINAGPSCSPPKVETTESSIVLMEMPFASAPTSGQSTTSSTVVTLSMALPKTLETSVPVSLPMQPNPTLGVRQQSHHQHLPALMPGQRRESNEAAPVMDNTPPTTPDSSISNISGSPREERTGGSSPISEDNMKLNRDSSEADNDSGGKGPAFSEDDTLPNAEGNSADRMLKPPAKRSVEETQSPKKRKRNRKHSECDKNTSKKTGRHSGRHGRHGVGSDSDDTSEGSNLCSVNSTSANHTNIATTVADLSNYSSRSPRPTKYNFYVELDPELDGSQRIAVLQQKLAELRKTYNAVKVELAAIERRRKKLRRREREVWKENNMNLFSAIKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00863745;
90% Identity
iTF_00965838;
80% Identity
-