Basic Information

Insect: Nomada ruficornis
Gene Symbol: -
Assembly: GCA_951802695.1
Location: OX637855.1:7084651-7093981[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00038 0.039 14.9 0.7 2 19 452 469 451 473 0.89

2 17 3.6e-05 0.0037 18.1 4.2 1 23 479 501 479 501 0.98

3 17 0.0011 0.11 13.5 0.1 3 23 509 530 507 530 0.93

4 17 0.43 44 5.3 1.8 1 23 537 560 537 560 0.98

5 17 9.7e-05 0.01 16.7 0.8 1 23 564 586 564 586 0.97

6 17 0.0024 0.24 12.4 0.5 1 23 592 614 592 614 0.98

7 17 0.00018 0.019 15.9 2.3 1 23 620 642 620 642 0.96

8 17 0.0013 0.13 13.2 0.1 1 17 647 663 647 664 0.92

9 17 0.11 11 7.2 3.3 1 23 1207 1230 1207 1230 0.98

10 17 0.013 1.3 10.1 0.5 1 23 1236 1258 1236 1258 0.97

11 17 0.82 84 4.4 1.2 1 23 1264 1286 1264 1286 0.86

12 17 2.2e-05 0.0023 18.8 0.9 3 23 1294 1314 1292 1314 0.97

13 17 2.1 2.1e+02 3.1 0.7 3 23 1322 1343 1321 1343 0.90

14 17 1.6e-05 0.0016 19.2 0.4 1 23 1347 1369 1347 1369 0.98

15 17 0.026 2.7 9.1 0.7 1 23 1374 1396 1374 1396 0.98

16 17 4.2e-07 4.3e-05 24.2 0.5 1 23 1402 1424 1402 1424 0.98

17 17 3.4e-05 0.0035 18.2 1.1 1 21 1429 1449 1429 1450 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00038	0.039	14.9	0.7	2	19	452	469	451	473	0.89
2	17	3.6e-05	0.0037	18.1	4.2	1	23	479	501	479	501	0.98
3	17	0.0011	0.11	13.5	0.1	3	23	509	530	507	530	0.93
4	17	0.43	44	5.3	1.8	1	23	537	560	537	560	0.98
5	17	9.7e-05	0.01	16.7	0.8	1	23	564	586	564	586	0.97
6	17	0.0024	0.24	12.4	0.5	1	23	592	614	592	614	0.98
7	17	0.00018	0.019	15.9	2.3	1	23	620	642	620	642	0.96
8	17	0.0013	0.13	13.2	0.1	1	17	647	663	647	664	0.92
9	17	0.11	11	7.2	3.3	1	23	1207	1230	1207	1230	0.98
10	17	0.013	1.3	10.1	0.5	1	23	1236	1258	1236	1258	0.97
11	17	0.82	84	4.4	1.2	1	23	1264	1286	1264	1286	0.86
12	17	2.2e-05	0.0023	18.8	0.9	3	23	1294	1314	1292	1314	0.97
13	17	2.1	2.1e+02	3.1	0.7	3	23	1322	1343	1321	1343	0.90
14	17	1.6e-05	0.0016	19.2	0.4	1	23	1347	1369	1347	1369	0.98
15	17	0.026	2.7	9.1	0.7	1	23	1374	1396	1374	1396	0.98
16	17	4.2e-07	4.3e-05	24.2	0.5	1	23	1402	1424	1402	1424	0.98
17	17	3.4e-05	0.0035	18.2	1.1	1	21	1429	1449	1429	1450	0.94

Sequence Information

Coding Sequence: ATGGAGTTAGGGGTTGAAGAGGCCCAGATTTGTCGCCTCTGCGGACAATACGAGAGCATATACATCGACGTTTTCGGCGAGGAGGGTACTAAAAGATTTTTGGGCTTGAAGATTCATAAGAAAATCAACATTTTGATAGATGCAAGGGATCCTCTGCCCAAGGCGATCTGTGTTCAGTGTCTGGGCAAGCTCGAATTCGTTTGCGATTTCCAAGAGGAGTGTCTTCGCACCCAACAAGTGTTACGCGATCGATACAATCTACCACCCTTAACAGAGATTGTCGAAGTAAAGACTGAACATACAACACCAAGTACATCAACAAACAATAACAACGATGAAACCAACAAAAATCTAAATTCCCCAAACGAGAATTCCAATAAAGATGTAGAACAACGTGTTCTAAGAACAGCCACAAAAACTCAGAGAAGCTTAAGGAGTCAGCAGCAAGCAAAAAGCAACGACGAAGCTACAAAAGAGCAGAACAGTAGTCAAAGCACCAGCGAAGAGAGCGCAGAAACTGAGCAAACTGTCCACAGTCCTGAAACAACGCTTACAAGATGGCTCAGAAGTAGGCAAAGTACAGAAATATCCACGTCGAATGAAACAGCAGCTCATACATCAATTGCAAATAGACTTAGAAGTCATGATAACACTGCCACAGAAATAACTCTTACATCTCGTAATAATTTGGACGAAAACGGCGAGAAACAGACTGGTAAGCAGCAAGACCCGCACACTCTCCAAATTCCAACTTCTGCCTTAAATAAGCTTCTCACGATCGTTTCGAATTCGCCAAACATCGAAGTTTCTGTAAAGGAATCGAAAAATCAGAACAGTGACATCGAGGACATCAGTTTCACTGTAGAATTATGTAAAAAGGAAAGCGACGACGTAGCCACCGTACATGCACGTGTATTTCCAGATCAGGGTACCTGTCTGGTAGACAAGGCCATCGTGAATCTTCTACAAAATCAAAATTGCGTGGAAGTGAATACTATAATAAACACCATCATCAGTAGTAGCCTTAAGAATGGCAATTCAGGGAAGCTAAAGGACTCGGCCGAATTCGAGCACAAATGGCAGGCGTCGCAGAATCCCCAGGAACTGTTCAGGATCGACGGCGAAGAGATTCGCGTGGACGACAATGTCGAACATGTCGTCACGGACAATCAAAATGGTTATTCCTGTAAATTATGTTGCAAGTTCTATGAACGCAAGGACAAGTGTATGGTTCACGTAAAGACTCATCTCGGTATCAAGCAATACACTTGTATTCTATGCAACGCCAAATTCGTATGTAAGTCCGACGTGATGAAGCATATTCGATGCTCTCATACAAATCCCAGGCCAATACAATGCCCGAAATGCCCGAAAAGGTTCAAGTCGAAGTTCTATCTAATGGAACACGACAACGTGCACAAAGGTGTGAGGCCTTATTCCTGTACAGACTGCGGCCAGAGTTACCATCACAAAGTGTCGCTACAGATCCACATGAAGTCACATTTACCTCCACAGAACTTGGCCTGCGAATACTGTGGCAAAGTGTTCCCATATCGTACGAGATTACTCAGTCACGTAGCCAGCGTACATTTGAAGAATCGTCGAAACTTTCGTTGTCGATTCTGTTACAATCTTTATTCGAGCCTTTCTGTTTTAAACGAGCACATTAAGACGCGCCACGCGACCACGTATACTTGCGATGTCTGTAGTAAAACTTTCAAAGTCGCGTCCAAGTATAAAGCTCATGTGCTTCAGCATTCGAATCCTAAGCCCTTCGTGTGCAACGTTTGTAACAATAGATACGCTTCCAAAGCATTCCTGAATGAGCATCTATTGAAACACGAGGGGCTGAGGAAACATATTTGCCAGAAGTGTGGCGCGAGGTTCGCTCAAGCTAGTCATCTCGCTGCGCATCGTCACGTGCATGGCGAGAAGAAGCACGTGTGTCCCGAGTGCGGGCGGAGGTTTAATAGGCGTGATAACATGAAGATGAGAGAGAATGACGGGCTGCCGCAGATTGTTTGTATGCGATGTTTGGGCACGTTGGAATTTCTATGCGATTTTTACGAACGTTGTCATCTCACCCAAAAGGAACTCTTGGAAGCTAGTCAAAATGAAGAGAATCGAAAGCTCCTGCAACAGAGCGATGAAGAATCGGACAAGGAAAACGCTGCCCCGAAGGTGAACGAGGTGAAGCAGAAATCGAAAGTTTCGTCACCAAACGGCTCTATAAGTACAAAAAATAGTCTGACCGAAAGTAATCGTGCAGAAAAGAATCATTCTGTCACTGATATTACCCAATCTGTTACAAAAAGCTCGTCCccgttgaagaaaaaaaatctcaCGAAACAATCCACCTTggataatatattttcaaaggAAAAAATACCAAAAAACGATCATAGTACTGCTGGCAATTTAAGACACAGAAAAAGTCTGCCAGCATCGGCGGAGAATGATTCAAAAATGCTACGTACTGCAAGATCTTTAAGTGGCTTAAACTCGTCACTGAAGAATATCGATATAAATTCGGTACTTCCTGTACGTCGTAAGAGAGGTAGAAAAAGTAAATTGGAGAAGATGAGGGAAGCTAGTCTATTGGCTAGCATAAAAAAAGAGATGAATGATGATTTCGACGAGCGAAGAAGCGGTAACTTCAATGACCAGGGTAAGAGATACGGTCTGCGTGCGATTTTCTCAAATGCTAAGTCTAACAGCGTAACCGGTAGCGCTGTGCTATCATCCAAAGAACATGTCGAACAAATCGTGCCGAAGAAACAGGCCGTGGTGGTGAACACGTCGTCCAATGCGTCCCGTGACAAAGCAAAGGAAACTAATAGCGAGCATAGGAATGATATATTAGCGAAAAAGCCCAGAAAAGTAGAATTCAGTAGTAAAAACACGGACAATTCTGACAACTGTACAAAGAGTACTGAAGATGATTCTGAAAAGAGCGCCGAAATACCTATTACTATAAAACAAGAGAAAACAGAGACAGAAAGTGTTCTGCCTAAGCAGAATGagaaatgcaataaattagTTTGGATCCCTAACGAGATATTGATGGAGAAAGGTGAAAATCTAATGAAGGATCAAAGTCTAGATAAAATGGACGTTGAAGAGATAAATTCAGATATGGTAACTTCGGCTGATTGGAACGATCAGAAATCGGCGTTAGTCACCGAACAAGACAGCGTCACTTTTACGAAGTTCACAGAGTCTAATGATGAAATCGCAAATCTCAatacggtagagaaggataaAAAGGAGCTGTGTAATTCAGATGACGAAATGATGGAAAATAGTAAGGTTGATTTAGTTCACAGTGTCAGGGGGCGTTCGACTTCGCGTCGACTAACGAATAGTCGAGATAGTTTCAATGAAAGTAAAAGCAAAGATAAGTCGTTTGGTAAAATCTCTGAATTGATCAGCGATGAACAAAAACAGGCCATTGAAACTTATTATACAGTAGACATGTCGGTTATCAACGAAGAGGAAGTGCAGAAGAATATAACGATAGTCGACAAGAAGAATGTGCGCTGCAACATTTGTGGCATTCTTTACATACGAATGGATAAATGTCTgGTACATATCTGGGGACATTTGCAGATGAAACCTTATCAATGCAAAACGTGTGACTTCTCCACAGTAACTGTCAGTAATGTTCGTTGTCATATTAGGAAAAGTCACTTGAAGATTAAACCATTCGCGTGCCATCTTTGTGAAAAACGATACTTGACTGCCATCCTGCTAGAAGAACATATTAATACTCATACTGGTGCCCGTCcatataaatgtaaaatttgcgattttgcAAGCTCCAGCAGACAAATACTAAGTTACCACAATACAACTCATAAGCCAGTAAAGgatattaattgcaaaatttgtgGGAAAGAGTTTTATTCACGTAACAGATTGCGTTCCCATATGATTACACATAACAAGGATAAAGTAGTTGCGTGTAAATACTGTTCTGCGTACTTATCCAATGCAGAAGCATTAGAAACACATTGCAGAAACCTTCACACGCAAGATtatgtatgtaatatatgCGGTAAACGCGCGAAATCACGAAAAGCTCTGTACAACCATATGAATGTTCATGCTGCTGCAAAGTACAAATGTACACTATGCCCAAATGTGTACAAGAGCAGTCAAATACTGAAGGAACATCTCCTGAAGCACAAAGGCATTAGAAAGTACAAGTGCAGTGTCTGCGAAAAGTCATTTGGACAACAGTCCCATTTAGCCGCTCATATGGCGGTACATAGTAAAATTAGATTCCATTGTCCTGGATGCAACAAACCCTTTAATCGACAAgataatatgaaaatacaTACTAAACGATGTAAGCTATTTTTGGCGAATCCAGAGTTGAAAAGTCGGTTAATCAAACGAGAAAAAATTATATCGTTCGATAACATAACGGAATTAACTTCAGAATTGAAAGCCAGAGATATGAACAAGTCTATGTCTAATGCGAAAAGGCAAACCGATGAGACGCCAATAAAGACTATAAACGATGAAGATAATGCTTCAGACTGTGATTCGGAATCTGAGTCAGATATTTCTTTTAACGAACCTGCGAATAAAACATTCGATCATGATAGGTGTAAAGGGACAGATGATATCTTAACATCAGCTGAgttaaatgtaattaaaattacaaacGTTGCTGACAAGTTGATAGAGAACAGAAAATTCTCAGTTCTCGAGAACGTGTTGGGACCAGAAAGTTATTAA
Protein Sequence: MELGVEEAQICRLCGQYESIYIDVFGEEGTKRFLGLKIHKKINILIDARDPLPKAICVQCLGKLEFVCDFQEECLRTQQVLRDRYNLPPLTEIVEVKTEHTTPSTSTNNNNDETNKNLNSPNENSNKDVEQRVLRTATKTQRSLRSQQQAKSNDEATKEQNSSQSTSEESAETEQTVHSPETTLTRWLRSRQSTEISTSNETAAHTSIANRLRSHDNTATEITLTSRNNLDENGEKQTGKQQDPHTLQIPTSALNKLLTIVSNSPNIEVSVKESKNQNSDIEDISFTVELCKKESDDVATVHARVFPDQGTCLVDKAIVNLLQNQNCVEVNTIINTIISSSLKNGNSGKLKDSAEFEHKWQASQNPQELFRIDGEEIRVDDNVEHVVTDNQNGYSCKLCCKFYERKDKCMVHVKTHLGIKQYTCILCNAKFVCKSDVMKHIRCSHTNPRPIQCPKCPKRFKSKFYLMEHDNVHKGVRPYSCTDCGQSYHHKVSLQIHMKSHLPPQNLACEYCGKVFPYRTRLLSHVASVHLKNRRNFRCRFCYNLYSSLSVLNEHIKTRHATTYTCDVCSKTFKVASKYKAHVLQHSNPKPFVCNVCNNRYASKAFLNEHLLKHEGLRKHICQKCGARFAQASHLAAHRHVHGEKKHVCPECGRRFNRRDNMKMRENDGLPQIVCMRCLGTLEFLCDFYERCHLTQKELLEASQNEENRKLLQQSDEESDKENAAPKVNEVKQKSKVSSPNGSISTKNSLTESNRAEKNHSVTDITQSVTKSSSPLKKKNLTKQSTLDNIFSKEKIPKNDHSTAGNLRHRKSLPASAENDSKMLRTARSLSGLNSSLKNIDINSVLPVRRKRGRKSKLEKMREASLLASIKKEMNDDFDERRSGNFNDQGKRYGLRAIFSNAKSNSVTGSAVLSSKEHVEQIVPKKQAVVVNTSSNASRDKAKETNSEHRNDILAKKPRKVEFSSKNTDNSDNCTKSTEDDSEKSAEIPITIKQEKTETESVLPKQNEKCNKLVWIPNEILMEKGENLMKDQSLDKMDVEEINSDMVTSADWNDQKSALVTEQDSVTFTKFTESNDEIANLNTVEKDKKELCNSDDEMMENSKVDLVHSVRGRSTSRRLTNSRDSFNESKSKDKSFGKISELISDEQKQAIETYYTVDMSVINEEEVQKNITIVDKKNVRCNICGILYIRMDKCLVHIWGHLQMKPYQCKTCDFSTVTVSNVRCHIRKSHLKIKPFACHLCEKRYLTAILLEEHINTHTGARPYKCKICDFASSSRQILSYHNTTHKPVKDINCKICGKEFYSRNRLRSHMITHNKDKVVACKYCSAYLSNAEALETHCRNLHTQDYVCNICGKRAKSRKALYNHMNVHAAAKYKCTLCPNVYKSSQILKEHLLKHKGIRKYKCSVCEKSFGQQSHLAAHMAVHSKIRFHCPGCNKPFNRQDNMKIHTKRCKLFLANPELKSRLIKREKIISFDNITELTSELKARDMNKSMSNAKRQTDETPIKTINDEDNASDCDSESESDISFNEPANKTFDHDRCKGTDDILTSAELNVIKITNVADKLIENRKFSVLENVLGPESY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01067778;
90% Identity: iTF_01067778;
80% Identity: -