Basic Information

Insect: Nomada ruficornis
Gene Symbol: lolal
Assembly: GCA_951802695.1
Location: OX637857.1:10759189-10773284[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 7.7e-08 7.9e-06 26.5 1.9 1 23 634 656 634 656 0.98

2 8 3.1e-05 0.0032 18.3 2.0 1 23 662 684 662 684 0.98

3 8 1.9e-06 0.0002 22.1 0.3 2 23 693 714 693 714 0.98

4 8 6.4e-05 0.0065 17.3 0.1 3 23 722 742 720 742 0.97

5 8 2.1e-07 2.2e-05 25.1 3.0 1 23 748 770 748 770 0.98

6 8 3.5e-06 0.00036 21.3 0.7 1 23 776 798 776 798 0.98

7 8 7.3e-05 0.0075 17.1 7.5 1 23 804 826 804 826 0.98

8 8 2.4e-05 0.0025 18.7 1.1 1 21 832 852 832 853 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	7.7e-08	7.9e-06	26.5	1.9	1	23	634	656	634	656	0.98
2	8	3.1e-05	0.0032	18.3	2.0	1	23	662	684	662	684	0.98
3	8	1.9e-06	0.0002	22.1	0.3	2	23	693	714	693	714	0.98
4	8	6.4e-05	0.0065	17.3	0.1	3	23	722	742	720	742	0.97
5	8	2.1e-07	2.2e-05	25.1	3.0	1	23	748	770	748	770	0.98
6	8	3.5e-06	0.00036	21.3	0.7	1	23	776	798	776	798	0.98
7	8	7.3e-05	0.0075	17.1	7.5	1	23	804	826	804	826	0.98
8	8	2.4e-05	0.0025	18.7	1.1	1	21	832	852	832	853	0.94

Sequence Information

Coding Sequence: ATGATGGGAGAAGTGATACGTGTTTCTGGGAGGGCACCGGATGTTGGGGAGTTCCTCAAGGAAGCGATGCTGTCCCAGAGATTCGCCGATGTGGCCCTTTGCTGTCCAGGTGGTCAACGATTCTTGGCTCACCGTTTGGTCCTTTCGGCAGCTAGTCCTTATCTGCAGGAAGTGTTGCTCGCTCACAGCAGAACGTCGTCGCACTGCGAGCCCATCACAGTGATCCTGGCCGAGGTGGAGGCCCCGGAACTCGCGGCCATCCTCGGTTTCGTGTACACCGGGAGCGCCACGGTGCCTCGTCCGCGATTGAACGCGTTCCTGCACGCCGCTGAGGCCCTCCACATCAGGCTGCCGCCGGTCCCAGTCGTGATGACTTGCTCGCAGCCCGACTGCAAGCAGGAAGACATCAAGGACGTGAAGATCAGTCCGAAGTACCTTCAGTGCGATCAGTATCCGTGCTGCGACCGCTGGTACCGTCCGCGAAGAAATCAAGATGAAGATTCCGCGAGCAAGGGGGAACCCTATCCGCCGATCGAGTCCCTAGAAACCGCAAGGGGAATCGGACCGCTTCCTGAATCGATGAACTTTGTCGGATCAAGATACGGCCCAGTCAGATATTGCTCCGCCACTTGGCCCGTTCCTTCTTTCGCGAATGACGGGCCCCGGGAAAGGAGTGTCCGCGTTGTAGATCAACGATTGGATAAGGAGAGGACGTGTCAGACGGACGTCAGAAGGTACAATCCGGTCTCTGCGGTGCCGAGGATCGACAGGATTACCGATGTCGCGGCTGGTCGCACGGAAAATCTTTTCAACGCCGGCAATCCCAACGCGAAGGCCCGCCAGCAGGAGTTCTGTTTCTCGAGGAGCACGTACGATGTACATAACGGACAGCTCGATACCCTTGAGATGAGAATGAAGGCTGATCGCAGTGACCTGGTTGTCAGGAACGAAGAGGATACCTCGACGAAGGATGTGTCGGCGTACGATCGTTGCTTCGACCAGGAGAGAATCGCCGAGGATCGTTTAAGCGTAATACGAATTGGATCGTGCCAGGACAGGGCTGGACCCGTGCAGCTACCTGGACGTGTTAAATCCTACGAGAAGTCTAATTATGGCGAAGATCTGACTTGTCGGGACAGCTGTTTCACCTGGAAGTCGCCGAGGAGGCATGTGGCTAATAGAGTCATAGCTTCACCGTGGAAGCAGACCATCAGGCCCTATCACATGCCCAAGCTGCAGCCCATAGTGCGTCAGCCTCCCATGAACGACAGCGATGCGAGTGAAAATCTGCGCGTGCCGGAAGTAACGTTGCCTCCGGCGATTGCTATCAGCCCTAATCGGCAGTTCACCAAAAGCATCGGCCCCACGGAAATTTATTACGGTGCTGAAGTTCCTGCCACGCGTGACGTCGCGTATGACAATAGCCCTGGACCGCTGGAAACGAGCTCCGTGTTGGAGCCGAGGGTCCCAGAGTTTTATTCACCTCAGATTCCGATGCCGACAAGCACGCAGATTGTTCCGCCGATCGATACCGACGCCAGGAGCAGCGAAGCAATTTTGCAACCGCCGAGCAATATCATTTGTACTACAACGAGGCCTTTGTCGGATGCCAGTGATGGTAGCCAGACGAATGTCAACAGAAGGAGGGGACACTTTGGGCAAACGATGCATCACTCGCCGCAGAAGCCAGAAATCTCTCATCCCGTTAGTAGATTGTGCGACACGATCGAGTCAAACGATAAGACCGATCCGTTCGTCGGCGCGGAAGTCGAGAGGACAGAGAATGAGCCGCGGGCGGACGACAAATTGGTGGAGCGGGTCATTATCAGcagcgataataataataataacgcgATAATTAGTCAAGAATCTGTCCAGAGCGATGGTCTGCAGGAGAGCCACAGGTGCGATCAATGTGGCAAGACTTTTGTTACCAGGGCATCCTTAAAGgTGCACATCAGGACGCATTCAGGGGAAAAGCCATTCCGTTGCGCCGATTGCGGCAAACAGTTCTCCCAGCTGCGGAATTACAAGTATCACCGAAGTGTCCACGAAGGCACGAGGGAATTCGCTGCGACATGTCCAGAATGCGGCAAGTACTTCAACGACCGTGGCTACCTGAGCTCCCACATGAAGATCCATCGCAACCGGAAGGAGTACGGGTGCGCGGAATGCGGCAAGAGTTTCAATCAGCGTGTCGCCTACAACATGCACGTGAGGATACACACGGGCGTGAAGCCGCATCAATGCGACCAGTGCGGCAAGGCGTTTTCACGGAAGATGCTGCTGAAGCAACACCTCAGGACACACTCCGGGGAACGGCCTTATCAATGTCAGGTGTGCCAGAAGGCTTTCGCCGATAGATCAAACATGACGTTACACACTAGACTTCACTCGGGATTAAAGCCGTACCAGTGTACCCTGTGCTCCAAAGCGTTCACCAAGAAGCATCATCTGAAGACTCATCTTAATTATCATACGGGTACGAAACCGTATTCCTGTCCAAACTGTGGACTCAGGTTTTCACAAAGCAGCAACATGAGGACGCATTTTAAGAAGTGTACGGTTAACAACCCGGCGGAGATGACTGGATCACCGTTAGAGGGTACTGGCATAGACACTTCTAAATCCGTACAAACGAGAATAATCTCGAGAACTCCTACGGACACCTTAACGCCACCTAATTCTGATCAAGAGCTGAGTATCTTGACACCGATTTCGTCGAGGGCTACTGGAACAGACGGATCGGCCACGTAA
Protein Sequence: MMGEVIRVSGRAPDVGEFLKEAMLSQRFADVALCCPGGQRFLAHRLVLSAASPYLQEVLLAHSRTSSHCEPITVILAEVEAPELAAILGFVYTGSATVPRPRLNAFLHAAEALHIRLPPVPVVMTCSQPDCKQEDIKDVKISPKYLQCDQYPCCDRWYRPRRNQDEDSASKGEPYPPIESLETARGIGPLPESMNFVGSRYGPVRYCSATWPVPSFANDGPRERSVRVVDQRLDKERTCQTDVRRYNPVSAVPRIDRITDVAAGRTENLFNAGNPNAKARQQEFCFSRSTYDVHNGQLDTLEMRMKADRSDLVVRNEEDTSTKDVSAYDRCFDQERIAEDRLSVIRIGSCQDRAGPVQLPGRVKSYEKSNYGEDLTCRDSCFTWKSPRRHVANRVIASPWKQTIRPYHMPKLQPIVRQPPMNDSDASENLRVPEVTLPPAIAISPNRQFTKSIGPTEIYYGAEVPATRDVAYDNSPGPLETSSVLEPRVPEFYSPQIPMPTSTQIVPPIDTDARSSEAILQPPSNIICTTTRPLSDASDGSQTNVNRRRGHFGQTMHHSPQKPEISHPVSRLCDTIESNDKTDPFVGAEVERTENEPRADDKLVERVIISSDNNNNNAIISQESVQSDGLQESHRCDQCGKTFVTRASLKVHIRTHSGEKPFRCADCGKQFSQLRNYKYHRSVHEGTREFAATCPECGKYFNDRGYLSSHMKIHRNRKEYGCAECGKSFNQRVAYNMHVRIHTGVKPHQCDQCGKAFSRKMLLKQHLRTHSGERPYQCQVCQKAFADRSNMTLHTRLHSGLKPYQCTLCSKAFTKKHHLKTHLNYHTGTKPYSCPNCGLRFSQSSNMRTHFKKCTVNNPAEMTGSPLEGTGIDTSKSVQTRIISRTPTDTLTPPNSDQELSILTPISSRATGTDGSAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01069090;
90% Identity: iTF_01066429;
80% Identity: iTF_01070479;