Basic Information

Insect: Nomada ruficornis
Gene Symbol: -
Assembly: GCA_951802695.1
Location: OX637855.1:11021432-11025652[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.83 86 4.4 5.8 2 23 249 271 248 271 0.96

2 21 0.0091 0.93 10.5 2.0 1 23 321 343 321 343 0.98

3 21 0.019 2 9.5 1.7 1 23 392 414 392 414 0.98

4 21 0.021 2.2 9.4 0.2 1 20 469 488 469 490 0.94

5 21 5.5 5.7e+02 1.8 1.6 1 10 502 511 502 525 0.79

6 21 0.0046 0.47 11.5 1.7 1 23 530 552 530 552 0.96

7 21 0.00045 0.047 14.6 0.3 1 23 600 622 600 622 0.98

8 21 0.00074 0.076 14.0 0.1 1 23 628 650 628 650 0.97

9 21 1.6e-06 0.00016 22.4 0.6 2 23 694 716 694 716 0.96

10 21 0.015 1.5 9.9 0.3 2 23 724 746 723 746 0.91

11 21 0.00012 0.012 16.5 0.3 2 23 755 777 754 777 0.96

12 21 0.00017 0.017 16.0 0.6 1 23 785 807 785 807 0.96

13 21 0.32 33 5.7 0.2 1 20 865 884 865 884 0.96

14 21 0.0013 0.13 13.2 0.1 1 23 903 925 903 925 0.98

15 21 0.00056 0.057 14.4 0.7 1 23 939 961 939 961 0.97

16 21 0.00012 0.012 16.5 3.1 3 23 985 1006 984 1006 0.96

17 21 0.017 1.7 9.7 1.4 2 23 1058 1080 1057 1080 0.93

18 21 0.054 5.5 8.1 0.4 2 23 1108 1130 1107 1130 0.92

19 21 0.022 2.2 9.4 0.0 1 23 1137 1161 1137 1161 0.95

20 21 0.0023 0.24 12.4 1.1 1 23 1166 1189 1166 1189 0.98

21 21 0.14 14 6.8 0.9 2 23 1219 1241 1219 1241 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.83	86	4.4	5.8	2	23	249	271	248	271	0.96
2	21	0.0091	0.93	10.5	2.0	1	23	321	343	321	343	0.98
3	21	0.019	2	9.5	1.7	1	23	392	414	392	414	0.98
4	21	0.021	2.2	9.4	0.2	1	20	469	488	469	490	0.94
5	21	5.5	5.7e+02	1.8	1.6	1	10	502	511	502	525	0.79
6	21	0.0046	0.47	11.5	1.7	1	23	530	552	530	552	0.96
7	21	0.00045	0.047	14.6	0.3	1	23	600	622	600	622	0.98
8	21	0.00074	0.076	14.0	0.1	1	23	628	650	628	650	0.97
9	21	1.6e-06	0.00016	22.4	0.6	2	23	694	716	694	716	0.96
10	21	0.015	1.5	9.9	0.3	2	23	724	746	723	746	0.91
11	21	0.00012	0.012	16.5	0.3	2	23	755	777	754	777	0.96
12	21	0.00017	0.017	16.0	0.6	1	23	785	807	785	807	0.96
13	21	0.32	33	5.7	0.2	1	20	865	884	865	884	0.96
14	21	0.0013	0.13	13.2	0.1	1	23	903	925	903	925	0.98
15	21	0.00056	0.057	14.4	0.7	1	23	939	961	939	961	0.97
16	21	0.00012	0.012	16.5	3.1	3	23	985	1006	984	1006	0.96
17	21	0.017	1.7	9.7	1.4	2	23	1058	1080	1057	1080	0.93
18	21	0.054	5.5	8.1	0.4	2	23	1108	1130	1107	1130	0.92
19	21	0.022	2.2	9.4	0.0	1	23	1137	1161	1137	1161	0.95
20	21	0.0023	0.24	12.4	1.1	1	23	1166	1189	1166	1189	0.98
21	21	0.14	14	6.8	0.9	2	23	1219	1241	1219	1241	0.94

Sequence Information

Coding Sequence: ATGGACGAGGTGGTGGAGTTGCAGAACATGGAAAGTGTGTGCAGGCTGTGCCTTTCCACCGACGAGCCGCAATCGTCGGTGTTCGCAACGCAGGACTCTCCGGTGTCGTTGGCCAGTATGATATACGCCTGCCTGTCTATACAGATTTTAGCCACAGATAGATTATCGACGCAGATATGCGCGAAATGTGTGAAGGATGTAAACCAGTGGCACAATTACAAGGAAGCATGCCTTCGCTCCCAAGGCAAATTGCATCAATGGTTGGAAAAACATTTGCAGCCCAGTCCGATGGTTGTAACTATTAAGGATGAACCTGTCGATTTGGACTTTTACGAGGACAAGATCGAAGTCATTTCAGAATCGGACAAGAGTTCAGACGTGGACAAGAATTCGGACTTGGAAACCACTAACGTAGAAGAGGAAATGGACAGTGTAACGAACAATATTCAGGCGCAGGAGTTGGCAGACGACGATATAGCCTTGGATGGAGGCCAATCTGCACTGACGAAAGATATCGTTGTATGTATAAAACCTGAACCACACGAGGATTACGACACCGACTGTACCATAGAAATAGAATCCGTCACCGGCAACGAACTTGTGTTGAACCCACTGTCAAACGCGGAGGACAGAATCATGGAAGCCGATTCCACTCAAAAATCGAATGCATCCGTATCGACTGGCAAGAAAAGGTTCAGACGAGGTCCACACACCCATTTCAGGGGCGCGCGAGTTTTTAAGCAAAAATGTGTGCATTGCCAAATCTTTTTGCACTCCAAGTACAGTTACACGAAGCATATGGAAAGATTTCATAGCGATAAACCGAACGGCGGCAACGATACATCGGAGTTACAAGACGACGAGGAGCTTATTGAAGATTTGGAGGACGAGCTAATGAGCATGGAGAAGGATGCGCCATTGACGCAAGTGCAGCAGAATATTATCAGCCAATTGAAAACATACTCCTGCTACTCTTGTCAAGAAACGTTCAGCGACCGAAGGAGCACCCTTTCGCATATTCGTCAGCATATGCCCGACCTTAGACCGTACACGTGCATCGCGTGCTTAACTGAATTCCCCGACCGAGCCATGTACAAGCTACACTGCGGAGCGTCGTTCGAATGTGCAATGAAGATTGCTCTGGTTATACCAAAACAGGGCGAGGAAAAGTATTTCACATGCAACATGTGTCTACGTTCTTTGCAAGACAGAAAGCAATTGCTCACTCATTTGTCGAAACATTCGGATAAACAGTACGAGGAACTGGTATCACCGGCGCGATCTCCTCCTAGACTAAAGCCAATGACAGGTCTGACAACTCCCAAGCAAGAAGTATCGAGAAAGTTGTTCGAGGACACGCCAAGTATACCCAAACCGTACAAGAACGGCGACCCGGCGCACAATCATGTGTGTGATCTGTGCGGCATGATCTACAGATACAAGCCCAACATGTTGAAGCACAGGGACCTGTGTCAACGTTTGCTACCAGAGGTCAGAACCTCCTACAGATGCGTACATTGTGGCATGACGTACCTCGTGTTTAAGAAGTTCCACGGTCACATAACATTGGACCACAAGAAGAAAGAATTTGCCTGTTCCGAGTGTTTCGCCAAGTTCAAATCTCCCAGTGATTACTTGACGCACCACGAGTCGCATCGTGGCAGTCGTAATAAAAAGTCACGCCGTGAATCAATGACAAACGATTCGAAAGCTATGCCTAACATCTCGACCCCTATCAAAGATTGGGACACGTTCGAGGCTGAAATGAATGCTGGAAGGCTATCAGACAGTAACCGTTATAAATGTGCCCTATGCAACCTGGAATTCGGTACCAGATCTGAGTTAATGGAGCACAGGAATCTTCATTTGAAAGTGAAGATCTATTCTTGCGTTATTTGTCGTAGCATGTTCAGCAGCGCTGGTGCTCTAGAGATTCACATGAAGGACCACGGCATAGAGGATCCTAACGAAAGAAACGTGAATATCTCGTGCATGGAATATGGTGCGGTGGAGGAAGATTCGAAAGATTCAAATTGTGCAAATGCCAGCGCCACGTCTGACCCAGGTGTGAAGAAGAACGAGTGCGATATGTGCACTAAAGTATTCTCCAACACCGCGAATCTCAAGAGACACATAAGGAACATCCACAAGACCAGCAGGGCCCATATTAGTTGTGCCTACTGTTCGCGAATGTTCAAGAGTAAGGACATGCGTGACCGACATATATCAGCTGCACATTTGAAGCCCGCCAAAAGCATGCTACGTTGCCCCCAATGTCCAAAGACATTTGTCTTCCAAGCCAATATGAACCTTCACTTCCAGACGGCCCACGGCGAGAAATCGCACGATGGCCACAAATGCGATATCTGCGGTAAAAAATTCGGCGAAGAAGCATCGCTGAAGATACACAGAAGTTGGCACAATCGAGCTAATTCCCGACTTAGCATACGTTTCATGAAGAACGAGGCCCAAAAACCAGTCAAATCATTAATTACGCCTAAACATGAGGCATCATTTAATTCCAACACTGGTCGACCAGCGAGAGCACGTAAATCCTTCCCCAATTCACCCCCGGTTAAGCCCAATGGAAATTTCCAATGCCAGGTTTGCAGTGACAAGTTCAATGATGTTACCGAGCTCAGGGAGCACTTGTGGGACGTGCACTGTGCTCGGAACAAATCCGAAAAGGCCTTCTCTGGCGAAGAGTTCCAATGTGAACtgtgtacaaatattttccctGACAAGGAAACGTTGGACGTCCACATGCAATGGCACAAGGCTAACCCCATTCTCAGCGACGTTCACAAAGTCAATTTCCCCTGCGAGATCTGTGGGAAACTGTATAGCTCTAGGAAGGTGCTCTCGAGACACAAGAAACTCCATAAGGCTACCAATGTGGCGTCAGCGAAATTCCAATCCATGGTTAAGAACTCGGCTATCACTCAGCCGCTGTGCAACATTTGCCACAAGGCGTTCAACAGCAAACAGTCGTTACAGCGTCACAAGATGAACCTGCACAGTGAAATATTTAACCCGAGACCGCAAACTATATTTGGCAGCACCAGAAGTTCAACTCAAGAAGAGTCTAAgtcgaagaaaattaaaatggaGGAGGAAGAGAAGAAATCGCCGTTCGCCATGGACGCTATGAACGCAGGAAGGAAATCGGTGATGTGCCACGTCTGCAGGAAGTTCTTCGCGAACATGAGCGTTCTCTACAAGCACAAACAGCTTGCACACAATAAATCGAACATGATGAGGAACGCGGGAAAGCAGGTAACAGCAGAATGTATCCCATTAAGTAGTAACGACGGCAAAGTCTCCTGCAACATTTGCTTCAAGAAATTCCCCGCTGTGCCCAATCTGCGCCAACATTTCACCGTGAAACATAAGAACGCTGCTCCTAAATACGCCTGTCCCATTGATGGTTGCAAGTTAATGTTCCCAACACCGTTGACTCTGAAGAACCATGAACTGTTGCATACCAGCATGATCTTCACTTGTACGCTGTGCGGCAGACATGTGTTCAGCAGAGTGGCGATGACGAATCACATGCTGACAGTGCACAACACTGTTTACGATGCGTCGAACAGCAAAAATTATCACAGAGAAATGGATTTGAGTACGTATACAGTGGCTGGCGCGATAGACGCCACCTGTCCCCGATGTCAAATTAAGTATCCCAATAACAGAGCCATGAAGATTCATTACTTCAAGTTCCACGAAGGCAGAGCTGATTAG
Protein Sequence: MDEVVELQNMESVCRLCLSTDEPQSSVFATQDSPVSLASMIYACLSIQILATDRLSTQICAKCVKDVNQWHNYKEACLRSQGKLHQWLEKHLQPSPMVVTIKDEPVDLDFYEDKIEVISESDKSSDVDKNSDLETTNVEEEMDSVTNNIQAQELADDDIALDGGQSALTKDIVVCIKPEPHEDYDTDCTIEIESVTGNELVLNPLSNAEDRIMEADSTQKSNASVSTGKKRFRRGPHTHFRGARVFKQKCVHCQIFLHSKYSYTKHMERFHSDKPNGGNDTSELQDDEELIEDLEDELMSMEKDAPLTQVQQNIISQLKTYSCYSCQETFSDRRSTLSHIRQHMPDLRPYTCIACLTEFPDRAMYKLHCGASFECAMKIALVIPKQGEEKYFTCNMCLRSLQDRKQLLTHLSKHSDKQYEELVSPARSPPRLKPMTGLTTPKQEVSRKLFEDTPSIPKPYKNGDPAHNHVCDLCGMIYRYKPNMLKHRDLCQRLLPEVRTSYRCVHCGMTYLVFKKFHGHITLDHKKKEFACSECFAKFKSPSDYLTHHESHRGSRNKKSRRESMTNDSKAMPNISTPIKDWDTFEAEMNAGRLSDSNRYKCALCNLEFGTRSELMEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPNERNVNISCMEYGAVEEDSKDSNCANASATSDPGVKKNECDMCTKVFSNTANLKRHIRNIHKTSRAHISCAYCSRMFKSKDMRDRHISAAHLKPAKSMLRCPQCPKTFVFQANMNLHFQTAHGEKSHDGHKCDICGKKFGEEASLKIHRSWHNRANSRLSIRFMKNEAQKPVKSLITPKHEASFNSNTGRPARARKSFPNSPPVKPNGNFQCQVCSDKFNDVTELREHLWDVHCARNKSEKAFSGEEFQCELCTNIFPDKETLDVHMQWHKANPILSDVHKVNFPCEICGKLYSSRKVLSRHKKLHKATNVASAKFQSMVKNSAITQPLCNICHKAFNSKQSLQRHKMNLHSEIFNPRPQTIFGSTRSSTQEESKSKKIKMEEEEKKSPFAMDAMNAGRKSVMCHVCRKFFANMSVLYKHKQLAHNKSNMMRNAGKQVTAECIPLSSNDGKVSCNICFKKFPAVPNLRQHFTVKHKNAAPKYACPIDGCKLMFPTPLTLKNHELLHTSMIFTCTLCGRHVFSRVAMTNHMLTVHNTVYDASNSKNYHREMDLSTYTVAGAIDATCPRCQIKYPNNRAMKIHYFKFHEGRAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01068450;
90% Identity: iTF_01069829;
80% Identity: -