Basic Information

Insect: Nomada panzeri
Gene Symbol: -
Assembly: GCA_951802685.1
Location: OX637837.1:4274606-4281074[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0013 0.14 13.2 4.6 1 23 428 451 428 451 0.95

2 18 5.9 6.6e+02 1.6 0.6 5 23 458 477 457 477 0.92

3 18 0.0043 0.48 11.5 1.5 2 23 483 504 482 504 0.95

4 18 0.71 79 4.5 3.0 1 20 531 550 531 552 0.90

5 18 0.0026 0.29 12.2 0.7 1 22 671 692 671 692 0.96

6 18 1.8e-05 0.002 19.0 0.4 2 23 700 722 700 722 0.94

7 18 0.098 11 7.2 4.9 3 23 734 755 732 755 0.94

8 18 0.55 61 4.9 0.1 2 19 775 792 775 795 0.88

9 18 0.27 30 5.8 5.0 1 23 802 825 802 825 0.93

10 18 0.14 16 6.7 4.9 1 23 836 859 836 859 0.94

11 18 1.9 2.1e+02 3.2 0.1 1 16 899 914 899 917 0.91

12 18 0.42 47 5.2 6.2 1 23 927 950 927 950 0.94

13 18 0.0029 0.33 12.0 0.2 1 20 1018 1037 1018 1039 0.94

14 18 0.00079 0.088 13.8 0.5 3 23 1048 1068 1046 1068 0.96

15 18 0.0019 0.21 12.6 1.0 1 23 1078 1101 1078 1101 0.93

16 18 2.5e-05 0.0028 18.5 0.2 2 21 1158 1177 1157 1178 0.93

17 18 0.0016 0.18 12.8 0.4 2 23 1186 1207 1185 1207 0.98

18 18 0.4 44 5.3 3.6 1 23 1217 1240 1217 1240 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0013	0.14	13.2	4.6	1	23	428	451	428	451	0.95
2	18	5.9	6.6e+02	1.6	0.6	5	23	458	477	457	477	0.92
3	18	0.0043	0.48	11.5	1.5	2	23	483	504	482	504	0.95
4	18	0.71	79	4.5	3.0	1	20	531	550	531	552	0.90
5	18	0.0026	0.29	12.2	0.7	1	22	671	692	671	692	0.96
6	18	1.8e-05	0.002	19.0	0.4	2	23	700	722	700	722	0.94
7	18	0.098	11	7.2	4.9	3	23	734	755	732	755	0.94
8	18	0.55	61	4.9	0.1	2	19	775	792	775	795	0.88
9	18	0.27	30	5.8	5.0	1	23	802	825	802	825	0.93
10	18	0.14	16	6.7	4.9	1	23	836	859	836	859	0.94
11	18	1.9	2.1e+02	3.2	0.1	1	16	899	914	899	917	0.91
12	18	0.42	47	5.2	6.2	1	23	927	950	927	950	0.94
13	18	0.0029	0.33	12.0	0.2	1	20	1018	1037	1018	1039	0.94
14	18	0.00079	0.088	13.8	0.5	3	23	1048	1068	1046	1068	0.96
15	18	0.0019	0.21	12.6	1.0	1	23	1078	1101	1078	1101	0.93
16	18	2.5e-05	0.0028	18.5	0.2	2	21	1158	1177	1157	1178	0.93
17	18	0.0016	0.18	12.8	0.4	2	23	1186	1207	1185	1207	0.98
18	18	0.4	44	5.3	3.6	1	23	1217	1240	1217	1240	0.94

Sequence Information

Coding Sequence: ATGGCTCGTGTCCATGTTTATGAACGGGCAGTCAATGCTGTCTTTACGGGTAGCAGATTCGATGAAACATCAAATCTGTCCAATCACGGATTGAAAATTAAGGAAGAGTCACTCGATTTAGATAAGGACACGCCCGACGAGTCGTCATCAGATAATGAAAATACCGGAGATCGATGTAAGATAATATCACCTGAAGCTGAATCTTCAGATGGCGTTAATCGCACGGAAAATGAATGCGCCTCGGCGCAAGTTCCCAATGATTtcgaatataaaaaattgaattttcataaaGTAGAACGTAAAAGCTTGTCATCGGAAGACTTGGCATCAAACGATATGCCACATTTTACATCAAATAAACAAGTTGATCAGGCTTCAAGCTTTTCACGCCATAGTACTAATGATCTTGAGGCGAGAACTCCTGAAGCATCCGAAAAGTTGTATGGTTCTATCCATAAACTTAAAACAAAGTTCAGTGGTTCGAACGACACATGCGCGAGTAACTTATCTGATCCATACGGTGCCCGTTCGAAAAGATTCCACGGTCCAACAAGGacatctttaaaaaaattgaagagtCCCAATACTTCACCCTCGAGGAAGATGGGGAATTCAAGCAGTTCATTCACAAAAAGATTGAAGTTCGATAACGGTTCGTGTAGTACACCTACAAAAAGGCAGAGGCAGACTATTCTTACAGATTTCATGTCGCTATGTAAAAGGGTTGAAAAAGTTGAGTGTGTTAGTCCAGAGAAAGTGACTGCCACAGAAGATGCTCCAGtatttaataatgataatggtAGTTGCAATGAAACTCCTGCAGCATCAACGGCCCCAATAAAGACTGAGATGTCCACGCCTGTTGAAATCCCTAAAATTAATACACCTCGTAGTGAAATACCATTTGTTCGAATACACATCGATCCCGGTATGATGATGGAATTATTAAGTAATAAGAAACTCAATACTGAACTTGAAAGTTCTACGACTTCTAGTGATAAATCGTACAATCTTAGATCAGAAAGAACGAGGCTTTCTGATTCAGCTATGTTTAGCGATTCGCCCTGCAAGAGAAGAAGAATGAATGATACGCCTAGGCAAAGTCGAAGATTGTCACAGGCCCAAAGGTTGAAGGCcaaatttaattgcaaagAGTGTTCAGTTTATCTCGAAAGATGTGATAAAATTTTGATTCAACGGAACtataaattagaaaattgcgggaaatatacgaaatataaCTTACGGCAAGATATCGCCAAAGTTGACCAGAAGCAGTTGTATCGATGCCATATATGCAGCAAGCACTTCTCCTTAAAGGAGAACATGCGTGAACACCTAGAACTATTTCATGTAGTTTATATGTCGAGCATATGCAAAGCGCGATATACATCTACGAATAAATTACTGAATCATTATTTTCGTCAACATGTCTCCAAACGCCAAGAATGCTGTGTATGTCGCGAGACATTTAAGTCGCTAGTATTATTGAAGCAACATATGGTCCTGCATTGCCTTAAGACCACACAATCCAAGAAGAACACTCAATCAGTtgatattgaaattaattgcaacaGAATTAAAAAGCAACACAAATGCAAAGGTTGCCGGAAACGATTTTGGTTACGTTCATGTTTGACTCAACATGGGCAGGTATGTAGCCGAATGAATGACCGAAAAGATGAAGAGAAAAATCCTCGCATAAAAGAATCACCGTCGTCGTTTTCGGAAGAAACAAGGGATCTGAAAGGTAACGTTACCGATGCTCAATACACTCTCGACTGTTCAGCACAGTATTCAACCAACGATCATCCTGTGCAGGCGCCTGATTTGACACAAGGATTGTCTTTGACAAATGCAGAGTCTCCCAAAAGCGCCGTTTCAAGTAGCCCTATTAAAACTGATGCTCGCATTTCACCGTCATCACTTACGAATGGAGGTAATAAAAGATTAATCAATGGGATTGCATGTGTAAAGGGGTACCAACTAGACGTGTCAGGAAAAATCAAGTTTCCCTGTACTATTTGTGGGATACAGTTCCAAACATTTCAGAATTTGTGCATACATGAGCGCACCTTCAACAAACCAGCCTACAACCGGTGCAATATCTGCGGTACTACCTTCCCTACTAAAAGACTATTGCAACTTCACATGCTTGCGACTCATACACCTGCTTGTGCGGAGAACTATAAGTTATTCTGCAAAGTTTGTAACCAAGGTTTTCATAAAAAGGGATATCTTCAGAGTCATGAGCGACATTTCCACATTTCGCAGCCACCTAAATCATGGCCGAGCCCCGATTACCTCTGGAATTCCAGTCCAGTCTGCAATATTTGCAACTTAGTATTCGAATCCTACGAACGGTTCATCGAACACAATATGTACTACTACAAGGGCCAAGTTTTCGTGTGCACATTTTGTAGCAAATCGTTCCAAGGAATGTATCAGCTTCATCATCACAACAAGTTAGTGCACAACCCGGAAAGCGCGCGGAAGTCGTACCTTTATACCTGCGATGTTTGCAACGAAGGGTTCAATTTCGAAACGCATTTCCATGCGCACAAATTACACGTTCACTTGTGCAACTCGAATTCTAGGCAGCTATATGTAAATCCAATGCAAGATCACAATTATGCGTTGACATCTAGCAATATTGCGGAAACAAGAGAGCCTATGGGGGTACCTGCTAAAACCTACGCCTGTACCGTGTGCGCCTTGAACTTCACCAACGCGGAGGACCTATCTTTTCATGATATAGAATATTCCGTGGATGGTGACTTTCACTGCAACAAATGCAGCCGGAAGTGTCGCACCAGTTCAATCCTTGCCAAGCACCAGAGTTTGAATCACGCTGGCTGCGATATTAACCAGAGTTACAAGTGCCGTTTCTGCGGAGAAGTATCGACCACTAGTACGTCCATGTTGTGCCACGAGAAACATTTTCACGGAAACAGTACAAATAATGCCACGAAAAATAATACGTCGACCCAACTAGCTAGGGATCGGAGCTTTAACCTAAGCACAGATAAGGACGTGTTTATAGACGATACTTTTATGTGTTTGACTTGTGGAATGAAGTTCGATGACGAGATAAATTTGAAGCATCATTTATTGGAGTATTCCAATATAGGCGAATATGGCTGTAACATTTGCCAAAGAAAGTTTACTGAGCAATATTTACTGGAAGTACACAAAGCGAAACATGCCAGGGTCAACAGTACTTCATCTCCTCATCGATGCCCAATATGCAACGAAGAATTTACAAACGTGGCGAACATTCGGACACACGTGTTACATCTACACCGATACGAATCGTTCGGTACTAATAAAGGGCAACAAAACTCTCAGAACGCTAACAATGCTCAGAACAAGAAGAATCCTATTTCGTCAATTCTGTCTACAAATGTAACTGAGTCACTCAATGGTTTTGCACCCCCTGCTGCTAATAGTGCGCTAAAGGAGAATACTGTGAAGTGTCCCGAGTGTGATGTAGCATTTAGCAGCAGCAAGAATCTAACGAAGCACAGGTCAAGATATGTGAACTCTGGGGATAACCAATGCACAATTTGCGGTCGTAGATTTCCTTGGGTCACATCACTCGAGCAACATTTACGTAAACACAACGCTGTTGAGAATCGTTTCTTGAAGCACAAGTGTTATCACTGCGCGGAAAGATTCCGAAGCTCTGTGGCTGTTTATTCGCATATCATTCACATCCATGGCAAAGACAAATTGGTATATTCTACTAGCGACGCAAGCAAGACTAACAACAGCAATGTTAACAAAAAGATCTCTACTTTGATCGAAAAGAGCCCGCCCGTGAAGAATCTTGCTGACAACTCTGAACCTTTAGCCATGCCTTCGAAAGAATATGAAAATGATCGGGATAAAATTTATAAGGCTGCCACGATTGTTAACGAACCAGCTGCAAATAAATGTGCAGAAATAAATGCGCCCGCAAAGACTGCGGTAGgaaatgatattttaaaaaatgcgGTAAGAAAGTCGCTCCATGACTTGGGCCACCCTACATTGAAAAACGTTCAACCACACTTTGATACCATACAGGAAAAAGCTAGAGAAACTAGCGAAACCCCTTCAACTGAGGTAATTAGTAAGACTGAAGCAGATTCTACGATGAATAATTCGAATTTCGTTGGGGACGAGATTTTTCAGCGTATGCTAGAACTTCATAGTAATTGCGAATCATCTGGTTTGGTACTTAATCCTTCGATTGATAAGCACGATTCTGAGGCGATTGAAATTGTTTGGGAAAAGAATGCAAGTCTTGCAAAATGTGTACTGCTCAACGATAGCGATCCGGATGTACAGATAATAAGGGAATGTCGTCAACCGTCTGTAATTCAGCAGAAGGAGAACAGTTTGTCGGTAAATTTGAAACCCCCGAGCAGTGAAGTTGGACGATTAAAAGTCCGGTCGTTCGCAAAGATTGTTGACTGA
Protein Sequence: MARVHVYERAVNAVFTGSRFDETSNLSNHGLKIKEESLDLDKDTPDESSSDNENTGDRCKIISPEAESSDGVNRTENECASAQVPNDFEYKKLNFHKVERKSLSSEDLASNDMPHFTSNKQVDQASSFSRHSTNDLEARTPEASEKLYGSIHKLKTKFSGSNDTCASNLSDPYGARSKRFHGPTRTSLKKLKSPNTSPSRKMGNSSSSFTKRLKFDNGSCSTPTKRQRQTILTDFMSLCKRVEKVECVSPEKVTATEDAPVFNNDNGSCNETPAASTAPIKTEMSTPVEIPKINTPRSEIPFVRIHIDPGMMMELLSNKKLNTELESSTTSSDKSYNLRSERTRLSDSAMFSDSPCKRRRMNDTPRQSRRLSQAQRLKAKFNCKECSVYLERCDKILIQRNYKLENCGKYTKYNLRQDIAKVDQKQLYRCHICSKHFSLKENMREHLELFHVVYMSSICKARYTSTNKLLNHYFRQHVSKRQECCVCRETFKSLVLLKQHMVLHCLKTTQSKKNTQSVDIEINCNRIKKQHKCKGCRKRFWLRSCLTQHGQVCSRMNDRKDEEKNPRIKESPSSFSEETRDLKGNVTDAQYTLDCSAQYSTNDHPVQAPDLTQGLSLTNAESPKSAVSSSPIKTDARISPSSLTNGGNKRLINGIACVKGYQLDVSGKIKFPCTICGIQFQTFQNLCIHERTFNKPAYNRCNICGTTFPTKRLLQLHMLATHTPACAENYKLFCKVCNQGFHKKGYLQSHERHFHISQPPKSWPSPDYLWNSSPVCNICNLVFESYERFIEHNMYYYKGQVFVCTFCSKSFQGMYQLHHHNKLVHNPESARKSYLYTCDVCNEGFNFETHFHAHKLHVHLCNSNSRQLYVNPMQDHNYALTSSNIAETREPMGVPAKTYACTVCALNFTNAEDLSFHDIEYSVDGDFHCNKCSRKCRTSSILAKHQSLNHAGCDINQSYKCRFCGEVSTTSTSMLCHEKHFHGNSTNNATKNNTSTQLARDRSFNLSTDKDVFIDDTFMCLTCGMKFDDEINLKHHLLEYSNIGEYGCNICQRKFTEQYLLEVHKAKHARVNSTSSPHRCPICNEEFTNVANIRTHVLHLHRYESFGTNKGQQNSQNANNAQNKKNPISSILSTNVTESLNGFAPPAANSALKENTVKCPECDVAFSSSKNLTKHRSRYVNSGDNQCTICGRRFPWVTSLEQHLRKHNAVENRFLKHKCYHCAERFRSSVAVYSHIIHIHGKDKLVYSTSDASKTNNSNVNKKISTLIEKSPPVKNLADNSEPLAMPSKEYENDRDKIYKAATIVNEPAANKCAEINAPAKTAVGNDILKNAVRKSLHDLGHPTLKNVQPHFDTIQEKARETSETPSTEVISKTEADSTMNNSNFVGDEIFQRMLELHSNCESSGLVLNPSIDKHDSEAIEIVWEKNASLAKCVLLNDSDPDVQIIRECRQPSVIQQKENSLSVNLKPPSSEVGRLKVRSFAKIVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01070605;
90% Identity: iTF_01068526;
80% Identity: -