Nlat005933.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nomada lathburiana
Gene Symbol
-
Assembly
GCA_963667235.1
Location
OY763900.1:20670181-20672520[+]

Transcription Factor Domain

TF Family
THAP
Domain
THAP domain
PFAM
PF05485
TF Group
Zinc-Coordinating Group
Description
The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 9.1e-10 2.1e-06 28.4 0.3 1 85 7 83 7 85 0.80
2 4 5.9 1.3e+04 -3.0 0.2 56 62 225 232 184 256 0.58
3 4 3.3 7.4e+03 -2.2 0.8 35 61 455 479 434 500 0.62
4 4 2.4 5.5e+03 -1.8 0.4 4 27 637 658 635 676 0.68

Sequence Information

Coding Sequence
ATGGAGGAAGTAACTAAATGCAGATACGTCGATTGTGTCGACACCCGGGAAAAGGAGCAAATACTTCACGAACTTCCCGTTTGCGATACCAGTCTCTGTGTGAGGTGGTTGATCAACAGTGGTCACGTGGATCTAATTGGAAGCGATCTGGACACCTTACGGTCTATGAAATTTTTCGTATGCAACAATCACTTTACGGAGGATTGTTACCTCAGCAAAGGCACTTTGAAGGAAAATGCAGTCCCTTCTCCACATTGGGGTGCTGTTTCAAGGACACTGAGAAATTTGAAAACACGGCGAAGAGTTCAATTAAACGGTCAGGAAAGTTCTATGGAGGAGGTATCGCCGAATCACCTGACAAAGAAAAATGCCCCTTCCGAATTCGAAGTGGATCAGTGGTGTAGAACATGCGCGACTAAAAAACAAGACCTCGTAAGTATGACAACCAAGGGAAAAGGTACGGACATGAGTCTCCTTTCCAAACTGAAGCTTTTGATAGAGATCGACGACGAAGATGCTTTGCCAACAAAGATGTGCGACGAGTGCGTCGACAAGTTGGAACAGTCGTTTAAGTTTTTCCAACAGATTTACGTAGCTGACAATACGCTGCGCCACGTGTTTCCAAATATGCGTACAAGCAATACACCGAGGAAGCCTCTCTATTCCATCGGTGAACACATGAGAAACgaacaaagagaaaaagaaacggagaaggagaaagagaaagggaaagagaaagggaaagagaaagagaaagagaaagaggaggagCTACAGatgcagcagcagcaacagcagcaacagcaatcTCAAGATCGTGCTCCAAAAGTTTCGCGTGGTATTTTTAGACGCGGCCGAGGTAGACCTCGTACCAGGGGTTACGCTGCCAGGGCGAGATCGAGGCAAAGATCTGCTCAGGTGCAAGCTGTTGCTCCAAGTTCCAGTGTCAACGATAGTACAACTTACGCGAGTAGAGCGGGCGAAACTCGGAACGTCGCATCGATGGCCAACCAAGAGAGACAAGGTGATACCGTGTTTTCGTTACTCACCGATACATGCCGTAGCGACGAAGAGCTGGATTGGTCGGACGTGTTAAAAGTGATGAGCAATCAAAGATATCGGCCAACGCCCAGAGCAGAAATCAAACccaagatagagaaaagaggAGAACGTCTTACAGTAGAACGAAAGGTCGAACCGAATGCTACGTTCAAGGCGGAAGCGATGGTGGCATCGTCGGAGCCGATGATGACGGAGGAGCCGAAAACAGAGAAGCAAGGTCGGATCAAGGACAAAGTGGATGAGAAGCCGGAAACGACGACGGTCAGGACGCAGAATAGCCAGTTCGAACGAATGCTTTGCGAATTTTGCGAGCATCCGTTCAAACTTCGACGCCAGTTGCAAAACCACCTATTGACCGATCACTTTCAATTATCTAAACACATGTGCACCGATTGTTTATCCTGCTACGAAAGCGAATCGTTGCTCTCGGAACATCGTAGCCTACGTCACGGAGATCGAGGATATCGCTGCGAGCATTGTTTCGTCGAATTTCtggaaaagaaattgctgCGGGATCACGTGAACAAGTGTCAGCCTTTGGTCGCGTCGCATTACTCTTGCGATTCGTGCGGCGTAACGTTCGCTTCGAAGCAAGCCCTTATCGAGCATATGGATGCCCATCCGAAAAGTTCGCTGGCGACAATCGGTAAAGCTACGAAAGAATCGGCGACGCCGTTGAAATCCAACGCAGAGGTCGCAGCAAAGTCCGAGTGTTTCGTTGCAACGTCTTCGAACGCGATTGAAATTTCGGAGAGGGCTGCTCAAGAGAAGAAGAGTAGCGCGATCGATGGTAAGGGCGGGGAGGAAAGTGGGAACGTAAGGGGCGAAGCGTCAACGGCGACTTGTCCAGATTGCAACGAGCGAACGCAGAGCACGGTAGAGCTGAGCATTCATCGAATGCGTCGGCATTCGATGAACAGGAAGGACACCACCTGTCTTTTGTGCGACAGTAAATCCTTTGCTTCTCCGGAGGAATACGAACAGCACGTGCTCGATCATTGTAAACGATTGAGAATATCACCGTGA
Protein Sequence
MEEVTKCRYVDCVDTREKEQILHELPVCDTSLCVRWLINSGHVDLIGSDLDTLRSMKFFVCNNHFTEDCYLSKGTLKENAVPSPHWGAVSRTLRNLKTRRRVQLNGQESSMEEVSPNHLTKKNAPSEFEVDQWCRTCATKKQDLVSMTTKGKGTDMSLLSKLKLLIEIDDEDALPTKMCDECVDKLEQSFKFFQQIYVADNTLRHVFPNMRTSNTPRKPLYSIGEHMRNEQREKETEKEKEKGKEKGKEKEKEKEEELQMQQQQQQQQQSQDRAPKVSRGIFRRGRGRPRTRGYAARARSRQRSAQVQAVAPSSSVNDSTTYASRAGETRNVASMANQERQGDTVFSLLTDTCRSDEELDWSDVLKVMSNQRYRPTPRAEIKPKIEKRGERLTVERKVEPNATFKAEAMVASSEPMMTEEPKTEKQGRIKDKVDEKPETTTVRTQNSQFERMLCEFCEHPFKLRRQLQNHLLTDHFQLSKHMCTDCLSCYESESLLSEHRSLRHGDRGYRCEHCFVEFLEKKLLRDHVNKCQPLVASHYSCDSCGVTFASKQALIEHMDAHPKSSLATIGKATKESATPLKSNAEVAAKSECFVATSSNAIEISERAAQEKKSSAIDGKGGEESGNVRGEASTATCPDCNERTQSTVELSIHRMRRHSMNRKDTTCLLCDSKSFASPEEYEQHVLDHCKRLRISP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01068611;
90% Identity
iTF_01069274;
80% Identity
iTF_01069274;