Basic Information

Gene Symbol
ct
Assembly
GCA_963667235.1
Location
OY763897.1:18023496-18044413[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.4e-27 5e-24 84.1 0.0 2 72 473 544 472 549 0.95
2 3 2.5e-32 9e-29 99.3 0.0 2 77 883 959 882 961 0.96
3 3 1.4e-30 5e-27 93.7 0.0 3 75 1119 1192 1117 1196 0.95

Sequence Information

Coding Sequence
ATGGATGAAATGCCCGGCCTGGTCAGTCGGTGGAGCAACTCGGGGACATTATATTTAACGAATCCAAGGATCAGCCAGCTGGTCGAGGAAGTGTCCAGGTTACAGCAGAGCCTGCAACGTCTCCAAGAGACCAGTGCACAGGCAACGGCGCGGCTCGAGGAAGAACTCGAGGCGCGCAGACAGCACATCAGCAGACTGGAGAGCAAACTGGAGCGACAGAGGGACTATGACGACCTAAAACGCGAGATTAACGCACTAAGGTCGGTCGATCTCTCGCAGATACCAACCGGCGAGCCCGGGAAGAGCTTGGAGCACCTTCTAATGGAACGCTCGAAGGCGCTTCAGCAAACGGAGATCTTGAAGCCATCCAACACTCCGGACACGCTCGGTGGACTATCGTCACCCCTGCAGCGCGCCTCTACCGCCTCGCCCCACGGGGTTGGAGGTGTTCCGCCTTCGTCCCACGTGTCCTCCCAGCAACCACCGCCGCCACCCCCAGCAGCCGTTTCCCTTCCCCCGCGTTCCACTCCGACACCGTCTTCTGCCACCTCGACAACATCCAGCCTCCTCTTCCCACCTCCTCTTCAAAATGTCGAAACCTTCGGCTCCTTCCTCGGCGAAGAGATCGTTGCCAATTGGAGGCGGACGTTGGAGAGATCCATCATGAatcagcagcaacaacagcagcagcaacagcaacagcaacagcaacagcagcaacagcaacagcaacagcagcagcaacagcaacatcaacagcagcagcagcaacaatcgACCCCGCTCGGTCAGCTGTCGCAGCAACACCAACAACAATTTCAGCAAGCTCAACCGCTTATCGGTTTACACCCTCCGACCACTACCAGTAGTATAAATCATCTTCCATCGCCAACGGACCCATCGTCTAGCTCTAATACCCCAGCGAAGTCGAACACACCGTTAGGAACTACCCCACTGAGTTGCCTTGATGCCGAGAAGGCTCCGACACCGGTGTCCGGCCACGAAACGCCCGCACCACCGACACCGTCTTCTACAACTGCGTTAACATCGCCCCCGAGCTTTCAACCACCCATATCGATGATCGAGACGACCACATCCTCAGCTTCAATTAACGGTGGAAGTATAACACCCGCCATACCAACCGCCCCGCCGCCAAAGAGCCCAGCTGATCAAGAATCGTgtcacaacaacaacaacagtcACCACTTGGCGAACAACAATATCGGTGGTCTCAGCGTGCTCGATACATTGAAGagtccgtttcgtttcgacgaaagAACCCATCCGTTCCGATTCAGCGACGAGTTCGGGGCTGCCGGGATGGCTGGAAGACTCGGCGAATCTCTCATACCAAAAGGCGACCCCATGGAGGCCAGACTTCAGGAGATGTTACGGTACAACATGGACAAGTACGCCTCGCAGAATCTGGACACGCTGCACATAGCCAGGCGGGTCAGGGAGCTGCTATCGATACACAACATCGGCCAAAGACTGTTTGCCAAGTACGTTCTTGGGCTGAGCCAAGGAACCGTCAGCGAGTTGCTAAGCAAACCGAAGCCGTGGGACAAGCTGACGGAAAAAGGCCGCGACAGCTACCGGAAGATGCACGGCTGGGCTTGCGACGAAAATGCTGTAATGCTGCTTAAATCTCTGATACCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGGATACCAACGTTCGCGCGTGGTCCACAGGAAGGTGGCCCGCCAGAAATGAGCGACGAAAGGTTGGCGCACATCCTCTCGGAATCAGGTCATCTACAAATGAGAGGCGAACACGAGATGTCGAACGATGCGGACAGCAAAAGTCCGAACAGAATCGGTTGTCCAAGTCCATTTAATAAAGACAGGCTCGACAGCCAAAACAGGAGACTGAAGAAATACGAGAACGACGACATTCCACAGGAAAAGGTAGTCAGGATCTACCAGGAAGAACTGGCTAAGCTCATGGGAAGAAGAGTCGAGGATCTTCGTGGGCCGCGAGAATTCTCTTCCAGTGCGATGTTCCCACATTTTTTCAGTGGCGCGCAAGGTGGTCTTCAGGGAATCGAGCGCACGCAGGAGGACATCCGGATGGCACTGGACGCTTACCATCGTGAACTGCAAAAACTGAACACCACACCGGGGCAAACACCATCGTTAACTGGACTGCCAGGATTGCCTGGATTACCTGGCCTTTTGGCCCTGCAGCAACAAGCCCTTCAGCAACACCATTTGGCCACGAATGGCGGCGGTGTCCAAGATTTAAGTCTCGGCAAAGTGGATCCAAGGCACAAAATGATCAACGGGGTTTccgaagaggaaaaagaaaaaatggaggAGGCGATGAGACACGCCGGAAGCGCATTTTCGTTGGTTAGGCCGAAACAGGAACCAACCACCGCACCACAGTCAACGCCAGGTGGATCTAGCGCGAGTTCACCACTTGGAAACTCGATTCTTCCGCCAGCAATGACACCTAGTGAGGAATTCTCTGGTGCGGCGGCGGCAAGTCCTCTTCAGAGGATGGCCTCCATCACGAATAGTCTGATAAGTCAACCGTCCACGCCAACTCATCACTCGGCCAATCAGAGACCACTGAAAGCAGTGCTTCCTCCCATCACGCAGCAACAATTCGACATGTACAATAACTTAAACACCGAGGACATTGTTAAGAGGGTGAAGGAACAGCTGTCCCAATATTCCATCTCGCAGCGCCTGTTTGGTGAATCCGTATTGGGTTTGTCTCAGGGATCCGTTTCCGACCTGTTGGCACGACCGAAACCGTGGCACATGCTGACACAGAAAGGCCGCGAGCCGTTCATCAGGATGAAGATGTTCCTCGAAGACGACAATGCGGTGCACAAACTGGTTGCCAGCCAATACAAGATCGCACCGGAGAAGCTGATGAGGACCGGCGGCTACGGTGGCCTGCCTCGTAAGTTTAACTCAGCCTGTGGAACACCGATGAAGCCCATGCCACCAACGAAACTGGTTCAAGAACAGCTTCAGAACGCTGCAAAGGCGCAAGCCGCGGCACAAGCCGCCGCCCAGGCAGCAGCACAGCATCAGCAAGAAAATCAAATGCAGCTTGGCCCGCCTCAACAGAGTCCTCAGCATCCGCAACATCCGCAGCATCCTCAACCCCCACCACCGATGATGCTGACGCCACCTGGTCCCCATCATCCTCATTCTCAGCTCAGCATGCAGGAGTTGCAGAAgaagcaacagcagcagcagcagcaacaacaaattAACCTTCATTCCCCGCATCATCAGATGACACCATCACCTCTCCGTGGACTCCATCCACATATCTCGCCTAGTGTATACGAAATGGCTGCGTTGACGCAGGACCTCGACACGCAAACGATCACGACGAAGATCAAGGAGGCATTGTTGGCCAACAACATCGGCCAAAAGATTTTCGGCGAGGCTGTGCTCGGGCTGTCGCAGGGCTCTGTCAGTGAATTGCTCAGCAAACCGAAACCGTGGCACATGTTGAGCATAAAAGGCCGAGAGCCTTTCATCAGAATGCAGCTGTGGCTCTCTGACGCGCACAACGTCGATCGGTTGCAGGCACTGAAAAACGAGCGCAGGGAGGCGAACAAGAGACGTCGTAGTAGTGGTCCAGGTCACGATAACAGTTCAGACACGTCTAGCAACGACACTGCCGAGTTTTACCACGCGGCCTCGCCTGGGCCAGGGCCTGCCTCGGCCAAGAAACAGAGAGTGCTCTTCTCTGAGGAGCAGAAGGAAGCCCTGAGGCTAGCGTTCGCTCTGGACCCGTACCCCAATGTGGCCACCATTGAATTCCTGGCCGGTGAACTGGCGTTGTCGTCGCGAACGATAACCAACTGGTTTCACAATCATCGGATGAGGCTGAAGCAGCAGACACCACACGGTCAGCCGGAACCTCAGTCTCCCAGAGAGCCTGGCCAACCGTTCGATCCTGTTCAATTCAGATTGCTGCTAAACCAAAGACTGTTAGAGATTCAGAAGGAGAGGCTGGGTCTAGGCAATGTGCCTCTGCCTTACACTCCGTACTTTAATCCCAACTTGGCTGCCCTAGTTGGTAACGCGCTGAAAGAGCAGTGTTCAGGGTTGGATCTCTCCATGAACGCGCTGAAAAGAGAACTGAACCAGGAATTCGAGGACGAGGACGTGGAGGATGCTATGAGCAATCTTGGCAGCGAAGATTCCGAAGTATCTGCGGGAAGTATAAAGCGGGAACCGGCGGAAACGCCTACAGCACCAGCGACGGTCAGATCGAACAGGAGGAAACCTGCTGCTCCGCAATGGGTGAATCCAGAATGGCAGGAACCACCAAGAACGGGCGACGAAGTAATCATCAACGGTGTCTGTGTGATGCAGACCGATGATTACGGAGTGAAAAGGGAAGCCGAGGAGACCATTAGGGTGGAACCGACTCCAGTGCAAGATAGATACGAGGAAGATGCGCAGAGCGAAATGTCTTCCGTTTCTGGGAATAATGGTCAAGACCGTGAGAGCCCTATGCCCAGTCCGAAGTCTGGGCAAAATAGTCCGGTGACTTCCCCGAGGCCGCCCTCCACGCAGCAAAATCAACAATCCACTGAGGAAACTCCTAAGGAAAGTATGGTGAAACACGAGCCGGAAGAAACGTGGGATTATTGA
Protein Sequence
MDEMPGLVSRWSNSGTLYLTNPRISQLVEEVSRLQQSLQRLQETSAQATARLEEELEARRQHISRLESKLERQRDYDDLKREINALRSVDLSQIPTGEPGKSLEHLLMERSKALQQTEILKPSNTPDTLGGLSSPLQRASTASPHGVGGVPPSSHVSSQQPPPPPPAAVSLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIMNQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQSTPLGQLSQQHQQQFQQAQPLIGLHPPTTTSSINHLPSPTDPSSSSNTPAKSNTPLGTTPLSCLDAEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPISMIETTTSSASINGGSITPAIPTAPPPKSPADQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDERTHPFRFSDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKEYVSGKEQGIPTFARGPQEGGPPEMSDERLAHILSESGHLQMRGEHEMSNDADSKSPNRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVEDLRGPREFSSSAMFPHFFSGAQGGLQGIERTQEDIRMALDAYHRELQKLNTTPGQTPSLTGLPGLPGLPGLLALQQQALQQHHLATNGGGVQDLSLGKVDPRHKMINGVSEEEKEKMEEAMRHAGSAFSLVRPKQEPTTAPQSTPGGSSASSPLGNSILPPAMTPSEEFSGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQENQMQLGPPQQSPQHPQHPQHPQPPPPMMLTPPGPHHPHSQLSMQELQKKQQQQQQQQQINLHSPHHQMTPSPLRGLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPASAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYTPYFNPNLAALVGNALKEQCSGLDLSMNALKRELNQEFEDEDVEDAMSNLGSEDSEVSAGSIKREPAETPTAPATVRSNRRKPAAPQWVNPEWQEPPRTGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDAQSEMSSVSGNNGQDRESPMPSPKSGQNSPVTSPRPPSTQQNQQSTEETPKESMVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01394913;
90% Identity
iTF_00982081;
80% Identity
iTF_01068868;