Basic Information

Gene Symbol
GATA-B
Assembly
GCA_951802735.1
Location
OX637930.1:8230958-8253461[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6e-17 3.9e-14 52.4 3.2 1 34 778 810 778 812 0.97
2 2 1.4e-17 3.4e-14 52.5 3.6 1 35 832 865 832 866 0.97

Sequence Information

Coding Sequence
ATGGTGGGTGGTATCCTATCGGACGGTGTACCAGCCACCACGATACGAGTTATCTCGCGACGTACACCGGCGCTTGCCGAAGAAACGTTTAACTCTGTTCTACCAGCAGTCTCCTTCCAGCTTGAGCTGTCAGGATACACCGACGGGGCAACGGAGAGGGCGATGAAGGATGCCGGGGCGAGCATCGGCGAGGAGGACGACGGGGAAACGAGCAGGCTGCTGTGCTTGGACAAGCGGGAAACGGCAGGAGTTGTTCGAATTTTTCGGCGGTCGCGGCTAGACCGGCAACTAGAGCAAcaccagcagcagcaacaacaacaacaacaacagcaccAGCAGCTAGTGTACGGGAAGCGTGGAGACGACGAAGGCGGGGACATCGTGGGCGTGCTGGAGGCGGGACAgcaggaaattgaaaatggcGCGGTCTTAGGGGCGAGCAGCATCGAAGCGGCAGCGATTCCCGTTTCGACGTGCCAGGAAAACGACGACAGCGCCGCGTATGGTTTGAACGCGCTCGGATACGACTCCCACGACTCTGTCCTACGAGAAAGGAATTGCACGGATCGGGACTCGGGCAGCTACGGTGACGGCGATCTAGCCGGTGCTTCTGCGAAGCCGGAGGATCCCGAACGACAGCgtcagcaacaacagcaacaacagcaacagcaacaggaACAGGAACAGCAAGAGCAAGAGCAGCACCACCGCAATCACCatcgccaccaccaccaccgatTCCTTCGTCACGAAGAGCACGAGCATCGGTCGGCGTACGGTCAGCTGGGGGCGAGAGAAGTATCGGTTTCCGAGGGTGGGGATAACGGACAGCGGAGCGAGGCCTCCGTGTTGCCGGAGGAAAATCGGTCTGCCAGTCACGCGCTTCGTTCGACGATGCATCGTTACGGTACCGAAGCGCTCTCTCCGACTACGACCGACCATCAACAGAGCCACCACCACCACAACCCTcatcaccaccaccaccatcaacagcaacagcaacagcaccATCATCATCAGCACCATTTGCAGTCGGGCACGACCGAACCCAGCGCGCTTTCGTCGGCTGGTCATCGTCAATTGGAGGAACGGGATACCCAGTCGCAACCGGCGGCGCATCGAGCACACGTAGACGAGGACGTGGAGAGAGTTAGTGGTATCGCGGCAGCAATGAGAGGCGCTCGTGGAGACTTTACTCTCGGTGTGCTGTTCCCGAACCTCGGCACTGCCGGTGCCAGCAGTGGCGGCAACGAGGTCGGAGCCAACGACAGCCATCATcaccagcagcagcagcagcagcagcaacagcagcaaccgCCGCACCACCATCACCACCATCACCATCACCATCACCACCACTTGGACGAGGTGCTGCCCGAGGACGCTTACCTCCAGCATCAGATACGAGGCAGCGGGGGCGCAGCAGGTGGTGGCGGAGGCAACGGCAACGGGAGCAACGGCGGCGGCGTGGAGAGCAGCGGCACAGGCGGTGCGGGTTCGCCGACTCTTCGAACCGGTAGTTCACCAGGTTCCAGTCGCAGCCCGCACGACGACCAAGGACTCTCCTCGCCGCACCGTCACGGCCAAACTGACGGAGGATACAGTCCCAGCGATCAGGGCAGGCAATCGTACGCGCACCTGACAGCGATGCAGCCGCCTCCGTCGGTGCAAACGAGCCACGGACTTGGCCAGGAGTCCGACAGGGTGTCCGATCAGCTGTACATGGATTCGATTTACGGTCATCACGCAGCTGGGACCGGTCACCATCATCAGGACCCGGAGCCCGGTTCGCCGCAGTCGCATTCACCGAACGGTACACTGTCCAGTCCGATGTATCGTTCGATGAGCGGGGTAGGCGGCATGGCAGCCGCGAACGCGGCAGGAACCGGAGGTACTTACGGTCTTGCGTACATGACCGGCAGCCCCACGGAATTGACCGCCTCGCCTCAGCAGCTGTGGAACGCGCAAGGTTTGGGCCTCGCGGCCATCTCCGAGGATTACGGAGGCGGCGGTAAGTCGTCCGGATCGGTGACCCATCAGGCCCTCCCGGGCTTCTCGCAACCGTTTTGCGGCAGGGCAAGCTTCCGAGGATACAGCCCGTCTTACTCGACTCAGCAGGGCGGTACCGGGGTCGGAGCTGGCGCGGTCGACGCATCCACGTGGACTTACGCTTCGCCGTCCAACGACTCTCTGACGACCCAGTACGCGACGCCGTCCAGACGACAGACCGTCAATCCGGCGTCGACGCCTACGCAGCATCAGCTCACCGCTACGGCCAATCTCAGCGCAATGCACAACATCGAGGCGGAATACTTTACGGAGGGCCGCGAGTGCGTAAATTGCGGCGCAATCTCCACTCCGCTATGGCGACGAGACGGCACCGGCCATTACCTGTGCAACGCATGCGGTCTCTACCACAAGATGAACGGAATGAATCGGCCCCTGGTGAAGCAGCCGCGGCGATTGTCGGCATCGAGACGGGTAGGCACTTCTTGCAGCAACTGTCAGACGACGATGACGTCGTTGTGGCGTCGGAACGCCCTCGGCGAGCCCGTGTGTAACGCGTGCGGCCTCTACTTCAAACTGCACAACGTGAACAGGCCGCAAACCATGAAGAAGGACAGCATCCAGACGCGAAAGCGAAAGCCAAAGGGTGGCATGAAGTCCACCGATACACCGATCTCCGGGGCGGTCACGATGTGCACGAACAACAACACCACCAACGCCGCAAACATCAACAACAATAACAACAGCAATACCAACAACAACAATTTGAAATTGGAACCAGACACCTACGGGGCATTGAGAATGAACCACTCCGGCGTGCCGGTTACCTACGGGAGCAACCTCTACGACAGCCCGCAGTCCTCCGCCCGGATCGTCTCCTATCAGTCGCCAACCACGCCCGGCATCTACTACGACATGATCACTTCTCAGCAGCAACAGCACCAGCCTCAACCTCAGCACCAGCATCAGCATCACCAGCAGCTTCTCGAGACCCACTCCCCGAAAGTCGAGTGCCCGTCCCCGCCTTGCACGAATCGATCGCCCGTTATGATGTCCGCTGGTCATTCGCCCGACCATCACCAGCTCGCTACCCCGCACATAGTTACGCTCGGCAATTCGTCGCCCAGCGCGGCGGCAACCAAGATCATCCTCGACAACGGCCATCTGGACAGACCAACGGTCGTCTCGATATCGTCCTAA
Protein Sequence
MVGGILSDGVPATTIRVISRRTPALAEETFNSVLPAVSFQLELSGYTDGATERAMKDAGASIGEEDDGETSRLLCLDKRETAGVVRIFRRSRLDRQLEQHQQQQQQQQQQHQQLVYGKRGDDEGGDIVGVLEAGQQEIENGAVLGASSIEAAAIPVSTCQENDDSAAYGLNALGYDSHDSVLRERNCTDRDSGSYGDGDLAGASAKPEDPERQRQQQQQQQQQQQEQEQQEQEQHHRNHHRHHHHRFLRHEEHEHRSAYGQLGAREVSVSEGGDNGQRSEASVLPEENRSASHALRSTMHRYGTEALSPTTTDHQQSHHHHNPHHHHHHQQQQQQHHHHQHHLQSGTTEPSALSSAGHRQLEERDTQSQPAAHRAHVDEDVERVSGIAAAMRGARGDFTLGVLFPNLGTAGASSGGNEVGANDSHHHQQQQQQQQQQQPPHHHHHHHHHHHHHLDEVLPEDAYLQHQIRGSGGAAGGGGGNGNGSNGGGVESSGTGGAGSPTLRTGSSPGSSRSPHDDQGLSSPHRHGQTDGGYSPSDQGRQSYAHLTAMQPPPSVQTSHGLGQESDRVSDQLYMDSIYGHHAAGTGHHHQDPEPGSPQSHSPNGTLSSPMYRSMSGVGGMAAANAAGTGGTYGLAYMTGSPTELTASPQQLWNAQGLGLAAISEDYGGGGKSSGSVTHQALPGFSQPFCGRASFRGYSPSYSTQQGGTGVGAGAVDASTWTYASPSNDSLTTQYATPSRRQTVNPASTPTQHQLTATANLSAMHNIEAEYFTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGTSCSNCQTTMTSLWRRNALGEPVCNACGLYFKLHNVNRPQTMKKDSIQTRKRKPKGGMKSTDTPISGAVTMCTNNNTTNAANINNNNNSNTNNNNLKLEPDTYGALRMNHSGVPVTYGSNLYDSPQSSARIVSYQSPTTPGIYYDMITSQQQQHQPQPQHQHQHHQQLLETHSPKVECPSPPCTNRSPVMMSAGHSPDHHQLATPHIVTLGNSSPSAAATKIILDNGHLDRPTVVSISS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01070734;
90% Identity
iTF_01069324;
80% Identity
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