Basic Information

Insect: Nomada hirtipes
Gene Symbol: Prdm15
Assembly: GCA_951802735.1
Location: OX637920.1:17515309-17517925[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3.4e-06 0.00035 21.3 0.4 1 23 237 259 237 259 0.98

2 12 0.021 2.1 9.4 3.6 1 23 264 286 264 286 0.96

3 12 0.00086 0.089 13.7 1.4 3 23 297 317 296 317 0.98

4 12 0.00043 0.045 14.6 7.1 1 23 410 432 410 432 0.97

5 12 0.00075 0.077 13.9 2.5 1 23 437 461 437 461 0.92

6 12 6.5e-06 0.00067 20.4 0.9 1 23 500 523 500 523 0.96

7 12 9.4e-07 9.7e-05 23.0 1.4 1 23 556 578 556 578 0.99

8 12 0.00016 0.017 16.0 4.0 1 23 592 614 592 614 0.96

9 12 0.00015 0.016 16.1 4.7 1 23 620 642 620 642 0.98

10 12 0.0013 0.14 13.1 3.2 1 23 648 670 648 670 0.98

11 12 9.4e-05 0.0097 16.7 6.6 1 23 676 698 676 698 0.97

12 12 0.00065 0.067 14.1 0.4 1 21 704 724 704 725 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3.4e-06	0.00035	21.3	0.4	1	23	237	259	237	259	0.98
2	12	0.021	2.1	9.4	3.6	1	23	264	286	264	286	0.96
3	12	0.00086	0.089	13.7	1.4	3	23	297	317	296	317	0.98
4	12	0.00043	0.045	14.6	7.1	1	23	410	432	410	432	0.97
5	12	0.00075	0.077	13.9	2.5	1	23	437	461	437	461	0.92
6	12	6.5e-06	0.00067	20.4	0.9	1	23	500	523	500	523	0.96
7	12	9.4e-07	9.7e-05	23.0	1.4	1	23	556	578	556	578	0.99
8	12	0.00016	0.017	16.0	4.0	1	23	592	614	592	614	0.96
9	12	0.00015	0.016	16.1	4.7	1	23	620	642	620	642	0.98
10	12	0.0013	0.14	13.1	3.2	1	23	648	670	648	670	0.98
11	12	9.4e-05	0.0097	16.7	6.6	1	23	676	698	676	698	0.97
12	12	0.00065	0.067	14.1	0.4	1	21	704	724	704	725	0.93

Sequence Information

Coding Sequence: ATGGAAATcggaaataaaacagaaagttCATCACATGTGCGTGACAATGTTTGCCGCGTTTGCCTCGCAAAGAATCGAAATAACCAATGCATTTTTGGGACCAAACAAAATGATCCGAATAAGGGAGAAACAATTGATTTGTCTGAGAAACTCCGTTTGTGTAGCGGTATTGAGATATTCGAGAATGATGGCTTACCTTCCACTATTTGTATAAAATGCATAGCTAAGATCAATAATGCCCACGAATTAAGAAAGCAATGTCAGGATTCTGATATTCGATTAAGAGAATTGTATGGATCGAAAGATCAGTCCTGTCAGACTGATTATTCCTTCACCTGTGATTTAATCAAAGTAGAAACTGATACATTATCTGCAATGGGTTGTAATCCTTATCCGATGATAAATCTAAACTCCACCAGAAAGGATCAGAAATCTGAAGATacagaaggagaagaagaagaggaagaattCGGTAGTAGCCTGGATGAACATAATACTCCTATTAAATCTAAGCAAAGGGGACGCGAAAAGAATGTCGCGGGAAGAGAAGCCTATCGGACAAGGAGAACGACAATGTTCAAGAGAGTGACATCTATAGAAAATTTAAGAAACCATAAAGAAAGGCAAAGACAgtatataaaaaagaatggaaatatCAAACGAGATGATGAGTTAACATGTATTAAAGAAACAGATTCACAAAGTTCTTACTCATGTCCCATATGTGGTAGACTTTATTCTAGCAAAAGGTCTTTGGATAGGCATATATTAACGCACGGTGAGAAAAAGTTTTCATGCGAAAAATGTAACAAACATTTCTTTGAACTTGATAAGTTGGTACAGCACAGCAAATTGCACACAGTTAAAGAAAAGTCTAAGCCtgtattatgtaaaatatgtaaCAGAAATTTCAGAAAAACTGATACTATGGTAAggcatttaaatattcataagAAAAGTAATCCTAAGGAAGTGCTCTCCATTTTGAAGGAAATTAGAGATAGAAGAAAGTTGGAAAACATCACGAATCCTCGCGAAGAAGTGTCTGAGAGTGAAAGTTGTACCGATAGCAACAAAGTAAGCGAAAAATTTGCGGCTAATCAGAAGATGCACATAGACATTCACAGAAAAAATGTGTTAGTGTCCAAAGGGAAAGAATCGAATTCCAATTTATCATCCTGTGATGTCGGCACTGAAAAACTCGACATACACGATCATGAATCGCGTCATcgttgtaaatattgtaacaaATGTTATGCAAATGAGAGATCGCTTCAAAAACATTTCCAGATTCATAtcgaaaagaaatttgtttgtaaTGTATGTAACATGAAATTTTTCCGACAGGATAGATTAAACAGCCATCAAAATCGATATAGACACGACGAGGATTCAACATCGATCGATGTACCAAAACCATCCGACGAAAAATCGGCTATTAAATTGATTAACAGCTGGATCAGGGAAGAACTTGACTCGGACAATGAAGAGAAAGGCTTCCCTTGTAAAGTTTGCGGAAAATCATATGATACGAAAAAATCTTTATTAAAACATAAATTGAGCGCACACAATTCGGAGGAAGAAAACTGTTTCAGCTGCGGGAAAATGTGCACCTGCAATGAAAAAGACAAGGAACAACCGAAATCAAGTGAAATTCTAAAACCATATCGATGCGACGAATGCACGAAATCCTTTGAGAAAGAAGTTAAGTTACAGAAACATATGAGAATTCATGAACGGGCTAAGGAACAGCAGGATGTGAATTTTAAGCGATTTTTATGTCATATTTGTAGCAAGACTTTTAGGCAAAACACAGGCCTCATGTTTCATATGAGAACGCATACTGGATACAAACCTCACGTGTGCAAATATTGCGGAAGAGGATTCACATCGAATTCTAACTGTATCAATCATGAAAGGACACACACTGGCGATAGACCATTCGTTTGTCATTTCTGTAGTGCTGCTTTTGCAAAATCGTGTACTCTTAAAGCACACATTACGACGCATACAGGAGAAGCAAATTACCATTGTAAAACTTGCGGCAAATCATTCAGAAGATTAAAGTACTTAAAGGAACACAAGTTCACGCATACAGGGGAAAAGCCGTATGCTTGTAAACTCTGTGGCACAGCCTACAGCCACTCGGGCAGTTTATTCGTGCatgaaaagaaatgtaaaGCGCAATATAATAACTATCAATCCAATTCGTCccaaattgtacaaaattattgtgAATCTGAAACGTCTTCGCCAAGCGCTACTCCTATCATCACGGTTCTACCACATCTGAACAATGCCGCTACAATGGATAACCAAACTAGCAAAACTTATATTGATAATATCCCGAGAATGAATTGTCAGAGTattgataatataaataatgttaatGCGTCGGATCTACATATTCATCCGAATTCGGATATTTCCGACGTTTCTTTAGCTGTAAAAAGCTTTGCACTTATTGGTCAAATGTTTTAA
Protein Sequence: MEIGNKTESSSHVRDNVCRVCLAKNRNNQCIFGTKQNDPNKGETIDLSEKLRLCSGIEIFENDGLPSTICIKCIAKINNAHELRKQCQDSDIRLRELYGSKDQSCQTDYSFTCDLIKVETDTLSAMGCNPYPMINLNSTRKDQKSEDTEGEEEEEEFGSSLDEHNTPIKSKQRGREKNVAGREAYRTRRTTMFKRVTSIENLRNHKERQRQYIKKNGNIKRDDELTCIKETDSQSSYSCPICGRLYSSKRSLDRHILTHGEKKFSCEKCNKHFFELDKLVQHSKLHTVKEKSKPVLCKICNRNFRKTDTMVRHLNIHKKSNPKEVLSILKEIRDRRKLENITNPREEVSESESCTDSNKVSEKFAANQKMHIDIHRKNVLVSKGKESNSNLSSCDVGTEKLDIHDHESRHRCKYCNKCYANERSLQKHFQIHIEKKFVCNVCNMKFFRQDRLNSHQNRYRHDEDSTSIDVPKPSDEKSAIKLINSWIREELDSDNEEKGFPCKVCGKSYDTKKSLLKHKLSAHNSEEENCFSCGKMCTCNEKDKEQPKSSEILKPYRCDECTKSFEKEVKLQKHMRIHERAKEQQDVNFKRFLCHICSKTFRQNTGLMFHMRTHTGYKPHVCKYCGRGFTSNSNCINHERTHTGDRPFVCHFCSAAFAKSCTLKAHITTHTGEANYHCKTCGKSFRRLKYLKEHKFTHTGEKPYACKLCGTAYSHSGSLFVHEKKCKAQYNNYQSNSSQIVQNYCESETSSPSATPIITVLPHLNNAATMDNQTSKTYIDNIPRMNCQSIDNINNVNASDLHIHPNSDISDVSLAVKSFALIGQMF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01070544;
90% Identity: iTF_01066444;
80% Identity: -