Basic Information

Insect: Nomada hirtipes
Gene Symbol: -
Assembly: GCA_951802735.1
Location: OX637920.1:10627528-10631310[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.075 7.8 7.6 6.6 1 23 77 99 77 99 0.97

2 16 7.5e-07 7.8e-05 23.3 3.7 1 23 105 127 105 127 0.98

3 16 0.044 4.5 8.3 1.9 1 23 134 157 134 157 0.94

4 16 4.4e-07 4.6e-05 24.0 1.7 1 23 163 185 163 185 0.98

5 16 0.71 73 4.5 3.9 2 20 191 209 190 213 0.82

6 16 0.0006 0.062 14.2 5.9 1 23 220 242 220 242 0.97

7 16 1.8e-07 1.9e-05 25.2 0.9 1 23 246 268 246 268 0.99

8 16 0.024 2.5 9.1 1.1 1 23 274 296 274 296 0.94

9 16 3.8e-06 0.00039 21.1 0.6 1 23 302 324 302 324 0.99

10 16 8.2e-05 0.0084 16.9 1.8 1 23 467 489 467 489 0.93

11 16 0.00014 0.014 16.2 2.9 1 23 495 517 495 517 0.97

12 16 0.00023 0.024 15.5 4.5 1 23 524 547 524 547 0.97

13 16 6e-06 0.00062 20.5 3.8 1 23 553 575 553 575 0.98

14 16 0.0097 1 10.4 1.5 2 20 581 599 580 601 0.91

15 16 9.7e-06 0.001 19.8 5.5 1 23 651 673 651 673 0.99

16 16 8.7e-05 0.009 16.8 0.9 1 23 677 699 677 699 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.075	7.8	7.6	6.6	1	23	77	99	77	99	0.97
2	16	7.5e-07	7.8e-05	23.3	3.7	1	23	105	127	105	127	0.98
3	16	0.044	4.5	8.3	1.9	1	23	134	157	134	157	0.94
4	16	4.4e-07	4.6e-05	24.0	1.7	1	23	163	185	163	185	0.98
5	16	0.71	73	4.5	3.9	2	20	191	209	190	213	0.82
6	16	0.0006	0.062	14.2	5.9	1	23	220	242	220	242	0.97
7	16	1.8e-07	1.9e-05	25.2	0.9	1	23	246	268	246	268	0.99
8	16	0.024	2.5	9.1	1.1	1	23	274	296	274	296	0.94
9	16	3.8e-06	0.00039	21.1	0.6	1	23	302	324	302	324	0.99
10	16	8.2e-05	0.0084	16.9	1.8	1	23	467	489	467	489	0.93
11	16	0.00014	0.014	16.2	2.9	1	23	495	517	495	517	0.97
12	16	0.00023	0.024	15.5	4.5	1	23	524	547	524	547	0.97
13	16	6e-06	0.00062	20.5	3.8	1	23	553	575	553	575	0.98
14	16	0.0097	1	10.4	1.5	2	20	581	599	580	601	0.91
15	16	9.7e-06	0.001	19.8	5.5	1	23	651	673	651	673	0.99
16	16	8.7e-05	0.009	16.8	0.9	1	23	677	699	677	699	0.97

Sequence Information

Coding Sequence: ATGTTCATGATGAAGGAGCCACCGCCTAACGAAGAATCGAGCTCCCAAGCACCGAAAGACAGCACCGTTCAGCCGGCAAAGGCAAGCCAGACCGAAGAGAAGTCGAAAGAAAACGCGCCCGTTAACGATCAATTCGATGATCTCGACGATACACCGTTAGACTTCCGGAAGAAGCAGGAACAAGGGAGGAGCAAGTCCTCGGCCAAGCAGGCCTCGAAGAAAAAGCTGCACACCTGCGAGATCTGTTACGCGACGTTCGATCGCAAGAGCAAGCACACGAGGCACATGTACAAGCACAGCAACTCGAGGCCCCACAAGTGTTCAATTTGCTCCAAGGGGTTCAAAACGAGTGCCCACTTGAACAGGCACATGGAGGTGCACGACGAGCCGGTGAATCTACACGCGTGCAACCTCTGCGATTTCAAGGCTCGCACCAAGCCCTACCTGAAGATCCACTACATCAGAAAGCACACGGAGGACTACAACTACAAATGTGAACAGTGCGGCAAGATGTTCAAGGTGCAGTCCGATTACACGACCCACATGAAGGATCACGACACGGAGTCCTGCGTGTGCGATATCTGCGGGTCATCTTATCCAAGCAAGAGCTCGTTGTACTTCCATAAGCATTACAAGCACAAGACCAAGGTGAAACAGTTTCAGTGTCAGACTTGCAAAAAGAAGTTCAAGACGCAGAAGAATCTGGAGTGTCACATGGAGCTGCATAAGATTAAGTACGTATGCGAGCAGTGCGGCATGGAGTTCAAGAGTAAATACGGCCTAACCAAGCACCTGAGGACGCATTCCGGTGAGAAGTCCTATCTGTGTGCGATTTGCGGGAAAACCTTCGGATGTCTCAGCTCGCAGAAGATCCACCTGTTAACCCACGTGGGCGAGCGACCGTACGTTTGCGATATTTGCGGTCAGAGCTTCACGCAGAGGTCGCCGATGATGCTGCACCGCAGGAAACACCCAGGTGTCCATCCACCGCCACCTCCAATTAAGATCACGAACCTGCTGCACGGTGTGcaggataaaataattgtgaaCAAGAGCGGCAAgCCTCGAGCTCGTGATCCTCTAGAACAAACGTACCTCGTCGTGCAAAACGTCGACAAGTACTTTCTCCTGCCTGTCGATCACGATATTATAGTGAAAAAGGAATCAGAAGAAGATCCCATCGTACCTGACATAGAAATCAAGACCGAAATTCAAGACGGCATTCCCGGGCGGTTGGCAATGAAATTGTTCCCAGAATTTCCCAACAGGACAGACGAGAAGCCTTGTTTGATTCCGAAGCTGTCTTTTCAACTACCCCTACAGTTGCCTCGGAACGTCCTGGATGCCCCCTTGGCGAACTTCCTAAGAGCACCGACGACAGACAGCGACGACAAGATGTTCTTTTGCGACAACTGTACCAAGGGATTCAGGACGAAGAGATCTTTGCGCATACACATGCCGACCCATAGCGACGCCCGTAACTTCGAGTGCACGGTGTGCCATCAGATGCTGAAGACCAGACGAACGCTTCGGCGCCACATGATTCTGCACACCGACAGCGGTAAGATGTTCAAGTGCTCCGACTGCAGTTTCGTGTCGAAAAGGAAGCACAGCTTGAAGCGTCATCAGGCCAGGATGCACACCGAGGACTCCGAGTACAACTGTCCCCACTGTCCGAAGATGTTCAAGCTCAGCATGGACTTCAACAGGCATCAACGAAAACACGCGGTCGCGCCGTGTCGCTGCGAGGTGTGCGGCAAGATGTATCAGAACGAGCACTATCTCCTGATGCATCGAGCCAAGGGGAAGAATTGCACGACCAGTTACTGCATGCGTTACGAGGATGTGAAAGATGAACAGGACTCGTCCGGGAGCTCCTCCAGCCCGGACACTGAGAAGATCACGGTGAAGGCAACGACCAGGAAGATGAAGAGAGAGGTGACGAGGGTGTTCAAGTGTAGCAAGTGCAAATGGCGATTCACCACTTGGAGATTGCTTCACAAACATATAAAACGGCACTTCGTTAGCTACAAGTGCGAGACTTGCGGAGCTGTGTTCAAGTACAGAGCCTCGTTTCTGAAACACGAGAGCTCGCACAAGGTGTGA
Protein Sequence: MFMMKEPPPNEESSSQAPKDSTVQPAKASQTEEKSKENAPVNDQFDDLDDTPLDFRKKQEQGRSKSSAKQASKKKLHTCEICYATFDRKSKHTRHMYKHSNSRPHKCSICSKGFKTSAHLNRHMEVHDEPVNLHACNLCDFKARTKPYLKIHYIRKHTEDYNYKCEQCGKMFKVQSDYTTHMKDHDTESCVCDICGSSYPSKSSLYFHKHYKHKTKVKQFQCQTCKKKFKTQKNLECHMELHKIKYVCEQCGMEFKSKYGLTKHLRTHSGEKSYLCAICGKTFGCLSSQKIHLLTHVGERPYVCDICGQSFTQRSPMMLHRRKHPGVHPPPPPIKITNLLHGVQDKIIVNKSGKPRARDPLEQTYLVVQNVDKYFLLPVDHDIIVKKESEEDPIVPDIEIKTEIQDGIPGRLAMKLFPEFPNRTDEKPCLIPKLSFQLPLQLPRNVLDAPLANFLRAPTTDSDDKMFFCDNCTKGFRTKRSLRIHMPTHSDARNFECTVCHQMLKTRRTLRRHMILHTDSGKMFKCSDCSFVSKRKHSLKRHQARMHTEDSEYNCPHCPKMFKLSMDFNRHQRKHAVAPCRCEVCGKMYQNEHYLLMHRAKGKNCTTSYCMRYEDVKDEQDSSGSSSSPDTEKITVKATTRKMKREVTRVFKCSKCKWRFTTWRLLHKHIKRHFVSYKCETCGAVFKYRASFLKHESSHKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01069821;
90% Identity: iTF_01069821;
80% Identity: -