Basic Information

Insect: Nomada goodeniana
Gene Symbol: stc
Assembly: GCA_963969485.1
Location: OZ018300.1:28717696-28722263[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2 1.7e+04 -4.4 1.6 15 19 555 559 554 559 0.81

2 16 0.17 1.4e+03 -0.7 0.3 4 10 588 594 587 594 0.94

3 16 2.6e-05 0.22 11.5 14.9 4 19 605 620 603 620 0.93

4 16 0.7 5.9e+03 -2.7 0.7 1 10 638 650 638 653 0.65

5 16 1.1e-05 0.088 12.8 16.3 1 18 656 673 656 674 0.97

6 16 0.16 1.3e+03 -0.6 1.5 1 10 683 692 683 692 0.79

7 16 1.1e-08 9.3e-05 22.3 10.6 1 19 712 730 712 730 0.98

8 16 0.61 5.1e+03 -2.5 0.9 5 10 759 764 759 764 0.95

9 16 1.2e-06 0.01 15.7 12.2 4 18 777 791 770 792 0.86

10 16 2 1.7e+04 -4.7 1.6 5 10 821 826 821 826 0.90

11 16 0.00059 4.9 7.2 8.4 1 11 832 842 832 843 0.97

12 16 2e-10 1.7e-06 27.9 13.8 1 19 859 877 859 877 0.98

13 16 0.51 4.3e+03 -2.2 0.6 5 10 905 910 905 911 0.89

14 16 2 1.7e+04 -8.6 11.5 10 19 924 934 913 934 0.71

15 16 8.2e-05 0.69 9.9 10.3 1 16 970 985 970 996 0.81

16 16 0.00057 4.8 7.2 9.6 1 18 1002 1020 1002 1021 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2	1.7e+04	-4.4	1.6	15	19	555	559	554	559	0.81
2	16	0.17	1.4e+03	-0.7	0.3	4	10	588	594	587	594	0.94
3	16	2.6e-05	0.22	11.5	14.9	4	19	605	620	603	620	0.93
4	16	0.7	5.9e+03	-2.7	0.7	1	10	638	650	638	653	0.65
5	16	1.1e-05	0.088	12.8	16.3	1	18	656	673	656	674	0.97
6	16	0.16	1.3e+03	-0.6	1.5	1	10	683	692	683	692	0.79
7	16	1.1e-08	9.3e-05	22.3	10.6	1	19	712	730	712	730	0.98
8	16	0.61	5.1e+03	-2.5	0.9	5	10	759	764	759	764	0.95
9	16	1.2e-06	0.01	15.7	12.2	4	18	777	791	770	792	0.86
10	16	2	1.7e+04	-4.7	1.6	5	10	821	826	821	826	0.90
11	16	0.00059	4.9	7.2	8.4	1	11	832	842	832	843	0.97
12	16	2e-10	1.7e-06	27.9	13.8	1	19	859	877	859	877	0.98
13	16	0.51	4.3e+03	-2.2	0.6	5	10	905	910	905	911	0.89
14	16	2	1.7e+04	-8.6	11.5	10	19	924	934	913	934	0.71
15	16	8.2e-05	0.69	9.9	10.3	1	16	970	985	970	996	0.81
16	16	0.00057	4.8	7.2	9.6	1	18	1002	1020	1002	1021	0.93

Sequence Information

Coding Sequence: ATGGCTACTTGGGATGGTTCATATTCTGGACCGGAcgatcaaaattattatatgtatccTGATCATACCATTCCTGGACCTGCAACTGGAAACTGGACATATTTTCCGAGTAATACGAATGATGATTATTCACGATCAAATCGTCAGTTCTGTGTACAAAATGAACCTGCATTAGAACAGAATTCAGCAAATAGTTTCCCTCAATTGAACTCAAATATTGTGCCAAGTTTAGTATCTGAAACTAACAATTATCCCGAGCATTTGGCAGATACGGTAGATAAGACTCAGGAATTAAGTACTCACGAACGGTTTATGAATAGCGCTAAGCCTGAAAAATACTGGAATCATAATCACGATCTAAGAAGTGCCAAGGCTAAACGTAATTCTTCAAAGAAAGGTGTTACGGACGCAACTCAGAGTACAATAAATCAGTCCAAATTACGTGTCATGGCTGAAGATTTTGTACCACACAATATAGATGTTGTCGATGTGAAATATGAATCATTAAATGTAGAACCTGCTAGTAATACAAATCGTTGTGTCAGGGATCACAGTGAATCGTcggataaatatttctttaacaatACAAGCAAATATGAAaggaaatacaataataaaaagggTTATAATCATAGACCACGTGAGGGTCAACAAGATCAATTCTACAAAGGGAATTCATATGGAAAGTCCTATCAGCATCAAGGCAGAACTTCCAATAGATGTCaaggtaataaatatttcgccaACAGGTATTATGCAGATAAATCTCAAGTAGATTCTGCAAACATGAACAGAAATCTGTTGGGGACAAGCGTGACTAATGCAGCCGCTTGTAATTCAAAATATGATGctgtaataaatacaaataatggAGAATCCTCCTTAAATGCAGAAgcaaattcaaataaaaataaacacttATGGGATGAGGACAATCGAGAAGAGACTATTGTTGTTGATACTGATAACATAAAAGATGACGCGCAAGATTGCAATAATCAGGCCAAGGAACAGGGTTCTTATAATCCTGATTTCAGGCAATCGTATAGTAATTATAGAAATGTAAAGAAATATCCACCTAAAGCTAGATCGAATAGAGAAGAAAATTTTTACAAGGAAATGCGACGCAATCATCAGGGATACAATAGAGAAAATTATAACAAAGAAATTAAACCGAATGTAAAAGACCATGACAGTAGTAATGGCGAATGTAGTGAATTTAAGCAGGGGTCTAGCACAGAAATCAGCCTAGAAACAAGAGGTAAAAAGGAGAAGAGGTATAAGAATTATGGATATAAAGGATTGAAAGATAACAGCAAAGAGACTAAAACAGAAGGTTAtatagaaaaagagaaaaataaatattacatgcaTGAAAGCAAAGAAAAGGTGTACGAACAGTGGAGGAGTAAACGGAACGGTAACGAAAGAAGTATTATTCAGCGATGGGGACAGAACAAAAAATCTGCTGTTGACGATGATGCAAatcagagagagagattggTAGACCAACTCAATAGGGGACATTTAGAATGTCTAGTCTGTTGTGAGTATATTAAGCAGAGCGATTACATTTGGTCGTGCTGTAATTGCTATCATGTTTTACATTTGAAGTGTGTTAAGAAATGGGCAAAATCATCTCAAGCAGAAAATGGGTGGAGGTGCCCAGCATGTCAAAATGTGAGCTTAATTATTCCGGAAGACTACTTTTGTTTTTGTGGCAAGACAAGAGTTCCTGAATGGAATCGTCAAGACGCAGCTCATTCTTGTGGTGAAATTTGTGGTAGAATGTTATCAAAAAATACTTGTCCTCACAAGTGCACCCTTTTATGCCATCCAGGATCTTGTCCGCAGTGTACAGCAATGGTAACAAAGCATTGCGGGTGCGGTAAAACTTCCCAAACAGTGCAGTGTAGTATGCACAAACTTTTGTTGTGCGATTCTGTATGCAGCAAAGGTTTAAATTGTGGCAGCCATAAATGTGAGGGAAAGTGTCATCATGGCGAGTGTTTGAATTGCGATAAAACAATCACGCAAGCATGTTACTGCGGTAAACATACAAGAGAAGTAACATGTGAAGCTAATATTCCAATCGTGTACTCCTGCAACGCGGTTTGTGGCAAACTATTGGAATGCGGTAATCACACTTGCAAGAAACTATGTCACGCAGATGCTTGTGAACCTTGTTCCTTAACACCTCAAAATATTACAACCTGCTGTTGTGGGCAAACAGCTTTaacagaaaaaagagaaacttGCTTAGATCCTGTCCCTACTTGCGACAAAGtctgtttgaaaaatttaaaaTGCGGACAACCTGATAATCCACATAAGTGTAAGGTAAAGTGTCATGAAGGAGATTGTCCTGTTTGTGACTTAACGACTGAAGTTAAGTGTCGTTGCGGTAATATGGATAGAGAAATAGCGTGTAAAGATCTGACATCGAAAGCAGACGATGCAAGGTGCGAAAAGAGATGCACGAAGAAAAGATCTTGTGGCAAACATAAATGTAATCAGCTCTGTTGCATAGAAGTTGAGCATATTTGTCCATTAATTTGTTCCAAAACACTAAGCTGCGGTAGACATAAGTGTGAGCAAAGTTGTCATAAAGGTAGATGTCAACCTTGTTGGCGTAGCAGTTTTGATGAATTGTTCTGCGAATGTGGAGCTTCTGTGATATATCCTCCCGTTTCATGTGGCACAAGACGACCTACTTGTGACAGACCATGCTCTCGCCAACATTCCTGCGGACACGAAGTACTGCACAACTGTCACAGTGAACCAACATGTCCCCCGTGTACTGTTCTCACTCAGAGATGGTGTCACGGCAAACATGAATTACGGAAAGCTGTGCCGTGTTATGTTAGCGAAATTTCCTGTGGTTTGTCATGCAACAAACCTATATCTTGTCGACGACACAAGTGTATTACTATTTGTCATTCCGGTGCGTGCGAAAAACCAGGTCAACAATGTTCTCAACCTTGTACTATACCAAGGGAACTATGTGGACATATTTGTGCTGCTCCTTGTCACGAGGATAAATGTCCAGATATATCATGCAAAGAAATGGTGAAGGTGACGTGTCAGTGTGGTCATAGAACCATGACTCGTGTGTGTGCTGAAAATTCAAAGGAGTATCAAAGAATAGCAAGCAGTATATTAGCTAGCAAAATGGCTGATATGCAACTAGGTCATTCTGTCAATTTGGAACAAGTTTTTGGGCAAGGCGCAAAGAAgcaaaatcaattaaaaacattAGAGTGCAATGACGAGTGTAAAATAATAGAACGGAATAGAAGGTTGGCATTAGGTTTGCAAATTGCAAACCCCGATTTAAGTGGTAAATTGATGCCCAGATATAGCGACTTTATGAAACAATGGGCTAAAAAGGATTCTCATTTTTGTCAAATGGTTCATGATAAACTAACAGAATTGGTTCAGTTAGCGAAAACATCGAAACAAAAGTCCCGTAGCTATTCTTTTGATTGCATGAATAAGGATAAACGTCATTTCATTCATGATTTGTGTGAACACTTTGGATGCGAAAGTCAAGCATACGATCAAGAACCGAAAAGAAATGTTGTTGCAACTGCTGTAAAGGACAAGTGTTGGTTGCCCAGCTATAGTTTACTGGAGATCGTGCAGCGAAAGAATGGTCAGAGGAAAGTTCCAGGTCCAATGCTGAATACTTCAAAAACTGATGGATCTACTAAGACAATATTGTCACTTCCTACACGAAAAACCCAAAAATCAGACATACTATTGAATATAAAGACGCCAGAACCAGAAATAGATTACTTTGACTACCAAGGTTAA
Protein Sequence: MATWDGSYSGPDDQNYYMYPDHTIPGPATGNWTYFPSNTNDDYSRSNRQFCVQNEPALEQNSANSFPQLNSNIVPSLVSETNNYPEHLADTVDKTQELSTHERFMNSAKPEKYWNHNHDLRSAKAKRNSSKKGVTDATQSTINQSKLRVMAEDFVPHNIDVVDVKYESLNVEPASNTNRCVRDHSESSDKYFFNNTSKYERKYNNKKGYNHRPREGQQDQFYKGNSYGKSYQHQGRTSNRCQGNKYFANRYYADKSQVDSANMNRNLLGTSVTNAAACNSKYDAVINTNNGESSLNAEANSNKNKHLWDEDNREETIVVDTDNIKDDAQDCNNQAKEQGSYNPDFRQSYSNYRNVKKYPPKARSNREENFYKEMRRNHQGYNRENYNKEIKPNVKDHDSSNGECSEFKQGSSTEISLETRGKKEKRYKNYGYKGLKDNSKETKTEGYIEKEKNKYYMHESKEKVYEQWRSKRNGNERSIIQRWGQNKKSAVDDDANQRERLVDQLNRGHLECLVCCEYIKQSDYIWSCCNCYHVLHLKCVKKWAKSSQAENGWRCPACQNVSLIIPEDYFCFCGKTRVPEWNRQDAAHSCGEICGRMLSKNTCPHKCTLLCHPGSCPQCTAMVTKHCGCGKTSQTVQCSMHKLLLCDSVCSKGLNCGSHKCEGKCHHGECLNCDKTITQACYCGKHTREVTCEANIPIVYSCNAVCGKLLECGNHTCKKLCHADACEPCSLTPQNITTCCCGQTALTEKRETCLDPVPTCDKVCLKNLKCGQPDNPHKCKVKCHEGDCPVCDLTTEVKCRCGNMDREIACKDLTSKADDARCEKRCTKKRSCGKHKCNQLCCIEVEHICPLICSKTLSCGRHKCEQSCHKGRCQPCWRSSFDELFCECGASVIYPPVSCGTRRPTCDRPCSRQHSCGHEVLHNCHSEPTCPPCTVLTQRWCHGKHELRKAVPCYVSEISCGLSCNKPISCRRHKCITICHSGACEKPGQQCSQPCTIPRELCGHICAAPCHEDKCPDISCKEMVKVTCQCGHRTMTRVCAENSKEYQRIASSILASKMADMQLGHSVNLEQVFGQGAKKQNQLKTLECNDECKIIERNRRLALGLQIANPDLSGKLMPRYSDFMKQWAKKDSHFCQMVHDKLTELVQLAKTSKQKSRSYSFDCMNKDKRHFIHDLCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRKNGQRKVPGPMLNTSKTDGSTKTILSLPTRKTQKSDILLNIKTPEPEIDYFDYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01069335;
90% Identity: iTF_01067295; iTF_01069335; iTF_01066632; iTF_01065930; iTF_01070033; iTF_01068662; iTF_01070746;
80% Identity: -