Basic Information

Insect: Nomada goodeniana
Gene Symbol: -
Assembly: GCA_963969485.1
Location: OZ018304.1:15586226-15590446[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.78 57 4.4 5.8 2 23 249 271 248 271 0.96

2 20 0.069 5 7.7 1.7 1 23 321 343 321 343 0.98

3 20 0.019 1.4 9.5 1.6 1 23 392 414 392 414 0.98

4 20 0.02 1.5 9.4 0.2 1 20 469 488 469 490 0.94

5 20 0.36 26 5.4 3.5 1 23 530 552 530 552 0.96

6 20 0.00026 0.019 15.3 0.4 1 23 600 622 600 622 0.98

7 20 0.0007 0.051 14.0 0.1 1 23 628 650 628 650 0.97

8 20 6.1e-06 0.00045 20.4 0.3 2 23 694 716 694 716 0.96

9 20 0.014 1 9.9 0.3 2 23 724 746 723 746 0.91

10 20 0.00011 0.008 16.5 0.3 2 23 755 777 754 777 0.96

11 20 2.3e-05 0.0017 18.6 1.0 1 23 785 807 785 807 0.96

12 20 0.3 22 5.7 0.2 1 20 865 884 865 884 0.96

13 20 0.0012 0.087 13.2 0.1 1 23 903 925 903 925 0.98

14 20 0.00054 0.039 14.3 0.8 1 23 939 961 939 961 0.97

15 20 0.00013 0.0097 16.2 3.6 3 23 985 1006 984 1006 0.96

16 20 0.016 1.2 9.7 1.4 2 23 1058 1080 1057 1080 0.93

17 20 0.051 3.7 8.1 0.4 2 23 1108 1130 1107 1130 0.92

18 20 0.02 1.5 9.4 0.0 1 23 1137 1161 1137 1161 0.95

19 20 0.0022 0.16 12.4 1.1 1 23 1166 1189 1166 1189 0.98

20 20 0.1 7.3 7.2 1.1 2 23 1219 1241 1219 1241 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.78	57	4.4	5.8	2	23	249	271	248	271	0.96
2	20	0.069	5	7.7	1.7	1	23	321	343	321	343	0.98
3	20	0.019	1.4	9.5	1.6	1	23	392	414	392	414	0.98
4	20	0.02	1.5	9.4	0.2	1	20	469	488	469	490	0.94
5	20	0.36	26	5.4	3.5	1	23	530	552	530	552	0.96
6	20	0.00026	0.019	15.3	0.4	1	23	600	622	600	622	0.98
7	20	0.0007	0.051	14.0	0.1	1	23	628	650	628	650	0.97
8	20	6.1e-06	0.00045	20.4	0.3	2	23	694	716	694	716	0.96
9	20	0.014	1	9.9	0.3	2	23	724	746	723	746	0.91
10	20	0.00011	0.008	16.5	0.3	2	23	755	777	754	777	0.96
11	20	2.3e-05	0.0017	18.6	1.0	1	23	785	807	785	807	0.96
12	20	0.3	22	5.7	0.2	1	20	865	884	865	884	0.96
13	20	0.0012	0.087	13.2	0.1	1	23	903	925	903	925	0.98
14	20	0.00054	0.039	14.3	0.8	1	23	939	961	939	961	0.97
15	20	0.00013	0.0097	16.2	3.6	3	23	985	1006	984	1006	0.96
16	20	0.016	1.2	9.7	1.4	2	23	1058	1080	1057	1080	0.93
17	20	0.051	3.7	8.1	0.4	2	23	1108	1130	1107	1130	0.92
18	20	0.02	1.5	9.4	0.0	1	23	1137	1161	1137	1161	0.95
19	20	0.0022	0.16	12.4	1.1	1	23	1166	1189	1166	1189	0.98
20	20	0.1	7.3	7.2	1.1	2	23	1219	1241	1219	1241	0.94

Sequence Information

Coding Sequence: ATGGACGAGGTGGTGGAGTTGCAGAACATGGAAAGTGTGTGCAGGCTGTGCCTTTCCACCGACGAGCCGCAATCGTCGGTGTTCGCAACGCAGGACTCTCCGGTATCGTTGGCCAGCATGATATATGCCTGCCTGTCTATACAGATTTTAGCCACAGACAGATTGTCGACGCGGATATGCGAGAAATGTGTGAAGGATGTAAACCAATGGCACAATTACAAGGAAGCATGCCTTCGTTCCCAAGGCAAATTGCATCAATGGTTGGAGAAACATTTGCAGCCCAGTCCGATGGTTGTAACTATTAAGGATGAACCTGTTGATCTGGACTTTTACGAAAACAACATCGAGGTCATTTCGGAATCGGACAAGAGTTCAGACTTGGACAAGAATTCGGACTTGGAGACCACTAACATAGACGAAGAAATGGACAGTTTAACGAACAATATTCAGGCACAGGAGTTGGCAGACGACGATATAGCCTTGGATGGAGGTCACTCTGCATTAACGAAAGATATTGTCGTATGTATAAAACCTGAACCACATGAAGATTACGACACTGACTGTACCATAGAAATAGAATCTGTCACTGGCAACGAGCTTGTGTTGAACCCACTATCAAACACGGAGGACAGAATTATGGAAGCTGATTCCACTCAAAAATCGAATGCATCAGTATCCGCTGGCAAGAAAAGATTGAGACGAGGTCCACACACTCATTTCAGGGGTGCGCGAGTTTTTAAGCAAAAATGTGTGCATTGTCAAATCTTTTTGCACTCCAAGTACAGTTACACGAAGCATATGGAAAGATTTCATAGTGATAAACCGAACGGCGGCAACGATACATCGGAGTTACAAGACGACGAGGAGCTCGTTGAGGATTTGGAGGACGAGCTGATGAGCATGGAAAAGGATGCGCCACTGACGCAAGTGCAACAGAATATTATCAGCCAATTGAAAACATACTCCTGCTACAGTTGTCAGCAAGGATTCAACGATCGAAGGAGCACTCTTTCTCATATTCGTCAGCACATGCCCGATCTTAGACCATACACGTGCATCGCGTGCTTAACTGAATTCCCGGACCGAGCCATGTACAAGCTGCACTGCGGGGCGTCGTTCGAATGTGCAATGAAGATTGCTCTGGTTATACCAAAGCAAGGCGAGGAGAAGTATTTCACATGCAACATGTGCCTACGTTCTTTGCAAGACAGAAAGCAACTGCTCAGTCATTTGTCGAAACATTCGGATAAACAGTACGAGGAACTGGTATCACCGGCGCGATCTCCTCCTAGACTAAAGCCAATGACATCTTTGACAACTCCCAAACAAGAAGTAACAAGAAAGTTGTTCGCGGACACTCCAAATATACCCAAACCGTACAAGAACGGCGATCCTGCGCACAATCATGTGTGCGATCTGTGCGGCATGATCTACAGATACAAGCCTAACATGCTGAAGCACAGGGACCTGTGTCAACGTTTGCTACCAGAGGTCAGAACCTCTTACAGATGCATACATTGCGGCATGACGTACCTCGTGTTTAAAAAGTTCCACGGTCACATAACATTGGACCACAAGAAGAAAGAATTTGCCTGTTCCGAGTGCTGCGCCAAGTTCAAATCTCCCAGTGATTACTTGACGCACCACGAGTCGCATCGTGGCAGTCGTAATAAAAAGCCACGACGTGAATCAATGACAAACGATCCGAAAGCTATGCCTAACATATCGACGCCTATCAAAGATTGGGACACGTTCGAGGCTGAGATGAATGCCGGAAGGCTGTCAGACAgtaattgttataaatgtGCCCTGTGCAACCTGGAATTCGGTACCAGATCTGAGTTAACGGAGCACAGGAACCTTCATTTGAAAGTGAAGATCTATTCCTGTGTTATTTGCCGTAGCATGTTCAGCAGCGCTGGTGCTCTAGAGATTCACATGAAGGACCACGGCATAGAGGATGccaacgaacgaaacgtgaaTATCTCGTGCATGGAATACGGCGCGGTCGAGGAAGATTCCAAAGATTCAAATTGTGCAAACGCCAGCGCCACGTCTGACCCAGGTGTGAAGAAGAACGAGTGCGATATGTGCGCTAAAGTCTTCTCCAACACTGCGAATCTCAAGAGACACATAAGGAACATCCACAAAACCAGCAGGGCCCATATTAGTTGTGCCTACTGTTCGCGAATGTTCAAGAGTAAGGACATGCGCGATCGGCATATATCAGCTGCACACTTGAAGCCCGCCAAAAGCATGCTACGTTGCCCTCAATGTCCAAAGACCTTTGTCTTCCAAGCCAATATGAACCTCCACTTCCAGACGGCTCACGGCGAGAATTCGCACGATGGCCACAAATGCGATATCTGCGGCaaaaaattcagcgaagaagCATCGCTGAAGATACACAGAAGTTGGCATAATCGAGCTAATTCTCGACTTAGCATACGGTTCATGAAGAACGACGTTCAAAAACCAGTCAAATCATTAATTACGCCTAAACAGGAGGCATCATTTAATTCCAACACTGGTCGACCAGCGAGAGCGCGTAAATCCTTTCCCAATTCGCCCCCGGCTAAGCCCAATGGAAATTTCCAATGCCAGGTATGCAGTGACAAATTCAATGATGTTACTGAGCTCAGGGAGCACTTGTGGGACGTGCACTGTGCCCGGAACAAAACCGAAAAGGCCTTCTCTGGCGAAGAGTTCCAATGTGAActctgtacaaatattttccctgACAAGGAAACGTTGGACGTCCACATGCAATGGCACAAGGCTAATCCCATTCTCAGCGACGTTCACAAGGTCAATTTTCCCTGCGATATCTGCGGGAAACTGTATAGCTCTAGGAAGGTGCTCTCGAGACATAAGAAACTTCATAAGGCTACCAATGTGGCGTCAGCGAAATTCCAATCCATGGTTAAGAACTCTGCTATCACCCAGCCACTGTGCAACATTTGCCACAAGGCGTTCAATAGCAAACAGTCGTTAAAGCGTCACAAGATGAACCTGCACAGTGATATATTTAACCCGAGACCGCAGACTATATTTGGCAGCACTAGAAGTTCCACTCAAGAAGAGTCTaagtcgaagaaaattaaaatggaggaggaagagaagaaaTCGCTGTTCGCCATGGACGCTATGAACGCTGGAAGGAAATCGGTGATGTGCCACGTCTGCAGGAAGTTCTTCGCGAACATGAGCGTTCTCTACAAGCACAAACAGCTGGCACACAATAAATCGAACATGATAAGGAACGCGGGGAAGCAGGTAACAGCAGAATGTATCCCACTAAATAGTAACGATGGCAAAGTCTCGTGCAACATTTGCTTCAAGAAATTCCCCGCTGTGCCCAATCTGCGCCAACATTTCACCGTGAAACATAAGAACGCTGCTCCTAAATATGCCTGTCCCATTGATGGTTGCAAGTTAATGTTCCCAACCCCGTTGACTCTGAAGAACCATGAACTGTTGCATACTAGCATGATCTTCACCTGCACGCTGTGCGGCAGACATGTGTTCAGCAGAGTGGCGATGACGAATCATATGCTAACAGTGCACAACACTGTTTACGATGCGTCGAACAGCAAAAATTATCATAGAGAAATGGATTTGAGTACGTATACAGTGGCTGACGCGATAGATGCCACTTGTCCCCGATGTCAAATTAAGTATCCCAATAAGAGGGCCATGAAGATTCACTACTTCAAGTTCCACGAAGGCAGAGCTGATTAG
Protein Sequence: MDEVVELQNMESVCRLCLSTDEPQSSVFATQDSPVSLASMIYACLSIQILATDRLSTRICEKCVKDVNQWHNYKEACLRSQGKLHQWLEKHLQPSPMVVTIKDEPVDLDFYENNIEVISESDKSSDLDKNSDLETTNIDEEMDSLTNNIQAQELADDDIALDGGHSALTKDIVVCIKPEPHEDYDTDCTIEIESVTGNELVLNPLSNTEDRIMEADSTQKSNASVSAGKKRLRRGPHTHFRGARVFKQKCVHCQIFLHSKYSYTKHMERFHSDKPNGGNDTSELQDDEELVEDLEDELMSMEKDAPLTQVQQNIISQLKTYSCYSCQQGFNDRRSTLSHIRQHMPDLRPYTCIACLTEFPDRAMYKLHCGASFECAMKIALVIPKQGEEKYFTCNMCLRSLQDRKQLLSHLSKHSDKQYEELVSPARSPPRLKPMTSLTTPKQEVTRKLFADTPNIPKPYKNGDPAHNHVCDLCGMIYRYKPNMLKHRDLCQRLLPEVRTSYRCIHCGMTYLVFKKFHGHITLDHKKKEFACSECCAKFKSPSDYLTHHESHRGSRNKKPRRESMTNDPKAMPNISTPIKDWDTFEAEMNAGRLSDSNCYKCALCNLEFGTRSELTEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDANERNVNISCMEYGAVEEDSKDSNCANASATSDPGVKKNECDMCAKVFSNTANLKRHIRNIHKTSRAHISCAYCSRMFKSKDMRDRHISAAHLKPAKSMLRCPQCPKTFVFQANMNLHFQTAHGENSHDGHKCDICGKKFSEEASLKIHRSWHNRANSRLSIRFMKNDVQKPVKSLITPKQEASFNSNTGRPARARKSFPNSPPAKPNGNFQCQVCSDKFNDVTELREHLWDVHCARNKTEKAFSGEEFQCELCTNIFPDKETLDVHMQWHKANPILSDVHKVNFPCDICGKLYSSRKVLSRHKKLHKATNVASAKFQSMVKNSAITQPLCNICHKAFNSKQSLKRHKMNLHSDIFNPRPQTIFGSTRSSTQEESKSKKIKMEEEEKKSLFAMDAMNAGRKSVMCHVCRKFFANMSVLYKHKQLAHNKSNMIRNAGKQVTAECIPLNSNDGKVSCNICFKKFPAVPNLRQHFTVKHKNAAPKYACPIDGCKLMFPTPLTLKNHELLHTSMIFTCTLCGRHVFSRVAMTNHMLTVHNTVYDASNSKNYHREMDLSTYTVADAIDATCPRCQIKYPNKRAMKIHYFKFHEGRAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01068450;
90% Identity: iTF_01069829;
80% Identity: -