Basic Information

Insect: Nomada goodeniana
Gene Symbol: ZNF236
Assembly: GCA_963969485.1
Location: OZ018306.1:19285015-19292611[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.00024 0.018 15.4 2.3 2 23 177 198 176 198 0.96

2 26 0.00011 0.0082 16.5 1.1 1 23 204 226 204 226 0.98

3 26 3.4e-06 0.00025 21.3 0.4 2 23 232 253 232 253 0.97

4 26 0.008 0.59 10.6 0.2 3 23 261 281 259 281 0.96

5 26 7.3e-05 0.0053 17.1 0.9 2 23 292 313 292 313 0.98

6 26 8e-07 5.8e-05 23.2 1.1 1 23 334 356 334 356 0.99

7 26 0.00017 0.013 15.9 0.7 1 20 362 381 362 384 0.95

8 26 6.1e-05 0.0044 17.3 0.2 3 23 392 413 391 413 0.98

9 26 0.0029 0.21 12.0 2.3 3 23 424 445 422 445 0.97

10 26 2.2e-06 0.00016 21.9 1.9 1 23 570 592 570 592 0.98

11 26 0.00012 0.0091 16.3 1.7 1 23 598 620 598 620 0.99

12 26 0.079 5.8 7.5 1.7 1 23 626 648 626 648 0.97

13 26 0.00058 0.042 14.2 4.8 1 23 741 763 741 763 0.99

14 26 3.6e-05 0.0027 18.0 5.1 1 23 769 791 769 791 0.99

15 26 8.8e-05 0.0064 16.8 0.8 3 23 799 819 797 819 0.97

16 26 0.00043 0.032 14.6 7.6 1 23 825 847 825 847 0.98

17 26 0.83 61 4.3 0.2 2 23 1235 1256 1234 1256 0.92

18 26 0.003 0.22 12.0 3.5 1 23 1262 1284 1262 1284 0.98

19 26 0.0038 0.28 11.7 1.1 2 23 1291 1312 1290 1312 0.96

20 26 4.7e-08 3.5e-06 27.1 1.3 2 23 1392 1413 1392 1413 0.98

21 26 8.6e-05 0.0063 16.8 3.2 1 23 1419 1441 1419 1441 0.99

22 26 0.0001 0.0074 16.6 1.9 1 23 1447 1469 1447 1469 0.98

23 26 0.001 0.075 13.4 4.0 1 23 1475 1497 1475 1497 0.98

24 26 3e-06 0.00022 21.4 0.6 2 23 1712 1733 1711 1733 0.97

25 26 1.4e-05 0.001 19.3 4.5 1 23 1739 1761 1739 1761 0.98

26 26 8.5e-07 6.2e-05 23.1 0.7 1 23 1767 1790 1767 1790 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.00024	0.018	15.4	2.3	2	23	177	198	176	198	0.96
2	26	0.00011	0.0082	16.5	1.1	1	23	204	226	204	226	0.98
3	26	3.4e-06	0.00025	21.3	0.4	2	23	232	253	232	253	0.97
4	26	0.008	0.59	10.6	0.2	3	23	261	281	259	281	0.96
5	26	7.3e-05	0.0053	17.1	0.9	2	23	292	313	292	313	0.98
6	26	8e-07	5.8e-05	23.2	1.1	1	23	334	356	334	356	0.99
7	26	0.00017	0.013	15.9	0.7	1	20	362	381	362	384	0.95
8	26	6.1e-05	0.0044	17.3	0.2	3	23	392	413	391	413	0.98
9	26	0.0029	0.21	12.0	2.3	3	23	424	445	422	445	0.97
10	26	2.2e-06	0.00016	21.9	1.9	1	23	570	592	570	592	0.98
11	26	0.00012	0.0091	16.3	1.7	1	23	598	620	598	620	0.99
12	26	0.079	5.8	7.5	1.7	1	23	626	648	626	648	0.97
13	26	0.00058	0.042	14.2	4.8	1	23	741	763	741	763	0.99
14	26	3.6e-05	0.0027	18.0	5.1	1	23	769	791	769	791	0.99
15	26	8.8e-05	0.0064	16.8	0.8	3	23	799	819	797	819	0.97
16	26	0.00043	0.032	14.6	7.6	1	23	825	847	825	847	0.98
17	26	0.83	61	4.3	0.2	2	23	1235	1256	1234	1256	0.92
18	26	0.003	0.22	12.0	3.5	1	23	1262	1284	1262	1284	0.98
19	26	0.0038	0.28	11.7	1.1	2	23	1291	1312	1290	1312	0.96
20	26	4.7e-08	3.5e-06	27.1	1.3	2	23	1392	1413	1392	1413	0.98
21	26	8.6e-05	0.0063	16.8	3.2	1	23	1419	1441	1419	1441	0.99
22	26	0.0001	0.0074	16.6	1.9	1	23	1447	1469	1447	1469	0.98
23	26	0.001	0.075	13.4	4.0	1	23	1475	1497	1475	1497	0.98
24	26	3e-06	0.00022	21.4	0.6	2	23	1712	1733	1711	1733	0.97
25	26	1.4e-05	0.001	19.3	4.5	1	23	1739	1761	1739	1761	0.98
26	26	8.5e-07	6.2e-05	23.1	0.7	1	23	1767	1790	1767	1790	0.97

Sequence Information

Coding Sequence: ATGGAAAAAATGTTGACACGGCATAATATGATTGCTGAGACTCCGCACGTCGAGGCGATACCTATAAATCTTATTGCTACTGAGGATGGTCGTACACTTCTAGCAGTCGCAGAACGCAAGGATGGTGTTTTGGAAATCGTTGCAGCCCCTGTTACATTCGTCGGCCAAAGTACAACAACGACTTCTTTGGTAGATGTAAAACACTTGAATGGAAATTTGATATTGCACTCGCCCATTTTTCAAATGAACGTAGAAGATGTCAGTGGAGCAGAATTTGGACAATCGATGGAAAATCTTGATGCTGAATGCGATGTTGTTGATTCTTTGAGGCCATCGTCTCCGCTGGAGataaaatgtaagaaaaagggaaaactgGAATTGCAGTCTCATCCTTGGGCCGATTCCTTGGTCGACCATGGGCTCGACAATGCAGACGAACAGAACGTGATTGCCACACCTACGAAGACGAATAATCTTGGGAGGCCCAAGAAAAGCCCCTCTATATCTTTGCAAAGCACGGATCGTTTGAAATGTGAGATATGTCATCAAGAGTTTGTTAAACAATCTTTATATCGGAAACACATGGATAATCATGCAGAGGAGAAACCACATCGATGTCCAAAATGTTCCGCGTCATTCAATGTACCGACAAACTTCACGCTGCATATGGCAACGCATAACACAGGTGAACCGAAGTGTCCAGAATGTGGGAAGAAATTCGCAAGGATGGCCAGTTTGAAGTCCCATATGCTGTTAcacgagaaagaagaaaatttgttctgTACAGAATGCGAAGATGCTTTTTCAACGAAAGCTCAGTTAGATGCACATTTAAAACTTCATGGTGAAAAATGGGCTACCGAGGAAGTACGGAAATGTAAATTGTGTAATAAACAGTTCAGCCAACCAGCCTTATACAGGCTTCACATTCGTGAACATTATAAGTTGCAGACAAAAATAGTAAAGCAAACTAAGAGGGGAACGAAACATAAAACAATgtataaatgtacaatatgCTTGAAGTCTTTCCAAAAACCGAGTCAATTAATGCGACATATTAGGGTGCATACTGGTGAAAAACCATTCAAGTGCACGGTATGTAGCCGTGCGTTCACGCAAAAAGGTTCGCTGCAAATTCACACATGGCAACATAATGGTATTCGTCCTCATGGCTGCGAATTGTGTAATGCCAAGTTTAGCCAAAAAGGTAATCTTAATGCTCATATAATGAGAGTTCACAACGTGCCCGAAGGAGAACCGATATATGGATGCAATTACTGTACATGCGTGTTTAAAAAGCTTGGCAGTTTAAATGGTCACATGAAACGTATGCATACCGATATAAACGAGGAAACCGCTACTATAGATAGTACTCAGTCCGATGGTATGGAATCTGATATACGTGCAACCGTGAACAATGTAATCAACCAATTGGCATCTTTAGAATCGAATACAAGTGAAACTACAAGATCGCCAAATTTCGAATCAGCCGCCTTATCGCAGACCGTAACGAAAAAAGATATTCTGCAACAAGCGCTGAGAAACAGTGGTCTTCCTAGCAAAAACAAAACTGCCATCGAAGGTATATCTGAACCACGAACGCTCGAGGCTCGCACCAATTTTGTGACATTATTGGATCGAGGGCCGGATGGTGGTACGAGgaaatatttaacaataaaacaaCGATGCGTGGGAAATATAAGATGGTATGCGTGCAGCTTTTGCCACAAGGAATTTAAAAAGCCTTCGGATTTGATACGGCATTTGCGTGTACATACGCAAGAAAAACCATTCAAGTGCACATACTGTTATCGTTCATTCGCGTTGAAGTCAACCATGATAGCACACGAACGCACCCATTCAAATACTAAAAGATACGCTTGCGGGTCTTGCGAAAAATCATTTGTATGCCATGGTAGCTTAATTGCACATACGAGATTGCACACAAAATCGAACGTCACTGACGAAAAATCTACTGTAAACAATAAGAAAAGCAACGTGGCCGACACAAATGGTAGTAGTAGCACATATTCCGCCTATCAATCGAGAACCCAAGCGAAGGCTAAATCAAAGTTGTCTCCGGAAGCGCAAAATTTAATACCTCAAGTAGTTTTGCAAGAACCATTGGTAATAAGCGATGCAGGCAATAAAATTTGTGTGGCACAGGTACCTTCGAAAGAGAAACGTGCTCATGACATAGCTGCGGATCCAGCTAGGCCGTATAAGTGCTGGGTCTGTCAAGCAGCTTTTAGAAAAATCAGTCATTTGAAGCAGCATCATCGCCGTCACACAGGAGAACGTCCTTACAAATGTACGAAATGTGATAGGAGGTTCACGTCGAATAGCGTTTTGAAGTCGCATTTGCATACACACGAAGATACAAGACCGTACGGCTGTTCGATTTGCAATGCTAAATTTTCAACACAGAGCAGCATGAAAAGACATCTAGTTACTCATAGTAATAGGAGACCATTCATGTGCCCGTATTGCCACAAAACTTTTAAGACTTACGTGAATTGTCGGAAACATATGAAAATACACAAGCACGAATTAGCTGAACGGCAATTGGAGGAGCAGAAATTTGAAATACAAGTACAGGATTCGGAAAAGACGAATGCAAATGAAAGTTGTACACAAAATTCGTCTCTCGACACTTCTTACACCTCCACTGTTTCTATTGCTTCCGTCGCTCCTACCTGCAATAGCACTACAACTTCTGCTATCGTTACAACGTCTCCATCTGTATATTCGGATAATCTTGCGCTTTCTCGCATTGGATCAGTGGAAATATCATTCCAGCCGCAATTGGGTTCCGAGTTTTCCCAAACTTTGGCCGAGTTCCAAAATATAACTGGGGAGAAGCGAAAAGCAAGGCCAGCTTTACCAGGAAATTGTGATGCTACAGCATTTATCGACCAAAACGTATCGGGAATAGCAGTGGCAAACCTTGAAAATTCACAGATATTGCATCCCGATGAAGCTGGTTCCGTCACATTGCCCGTTTATACTGGCGATCAGGCCCTCACTCCGGAAAGCATACGAGACATAGAAGAGACACTGAATCAACAATTCCTTAATATTGGACTGAATCTCAGATTAGGAACTAATCAGACGAAACATTCGCACAGTACAAATGCAGCTACTGTGTTTGGTAATACGAAAGAGCAACAGAGGCACCAACCCATATTGaatgttatttatgaaaataacaatAGCAGTAACAATAACGTAGAATCAACCGCGGACCACGTTTTCTCGTCACAGTTAGACCCATTCGAAATGGATCATATTGCCTTACAATCGGATGCTGATGTCGAAATTGGATTGGATACCAGTAGTTCCAATAGTATATCAAGTATACTGCCGAGAAGTGTGAAAGAAGACCGACTTTCTGTTTCTGTTACAACGCCCAATAATATAAGCACCGATGCATCCGGAAGATCTAGCATGCAGACAATAGTATTCATTTCGCAAGAAAATTTTGGAAGGAAAGAGGACCCGGGTACTGAATTGGGCATGGAACATATAAATAGGGACAGTGGCCAGCAACAATGTACGATCAACCCCATACTTTTAACAGAAGAGTTTCGTGAAATTCCACAAGATTCCAAGATTCAATTAAATCTGAACGTGGCATCGCCCGACGCCCCAGAAATGATGAAGACTACTATAGATAAAATATCTCGTGTAGAATCTCTATTGCAGTGTCATATGTGTGGTCAGCAAGGATTCGCAGCTGCTGGATTAAAGGAACATCTGACAAGCCATCGCGGAACTAAAGAATATCAATGTACAGAATGTTTCTCAAGATTCTGCACGAACGGTGGATTGAATAGGCATTCAAAAATACACGTCACGAAACAGTCATTAAAGTGCCCATCGTGCGAAAAGTACTTTAACGATAGGCTACAGCTACGATCGCATAGTAAGATTCACGAAACCACGATGTGGAACGCTATACCCTCCGGAGGTGATAGCGTTGAGGGGAACACGATACCTTCTTTGGAAGTGCAGTCCATGGTAAATGATAGCACACCTTCGAACTATATCGCATTGGATTCGGACGCTGCAGTTTCCGAGAAAGTACTTCTAGACACAGTGGCAGAAAAGGAAGTAATGGATCGATTGCAAAATGACTTGATGGATCCAGGAGAGCGGAAGGAGTATACAAACAGGTGCAAGTATTGTCCGAAAACTTTTCGCAAGCCGAGCGACCTCATAAGACATATACGTACGCACACAGGCGAAAGGCCATACAAGTGTGATTATTGCAGCAAAAGTTTCGCCGTGAAGTGTACTTTGGATTCGCACATGAAGGTTCACACTGGTAAAAAGACATTTCGTTGCCACGTGTGCAACAGTCTGTTCGCAACCAAGGGCAGTTTAAAGGTGCACATGCGATTGCATACAGGCTCCAAACCGTTTAAGTGTACCATTTGCGATTCAAGATTTCGAACCTCCGGCCACAGAAAGGTACATTTAATGAAACACGCACGCGAACATAAAGAAAATCCAAAGAGGAAGCAAAAACATTTGAGAGTCGCGGCCATAGCTGAAGTAGCGGCGGATCTTGAGAAGTGTGATGAAAGAGAGGAGAGGATGGGCGACTGTGGGCCGAATCAGCAACTGCAAGAAGAACATCTACCGGGAGCAACCGCAGGATATTCTCATCTGGATGCAATTAATATCGACACAGCTGCTGCCTGCTTATCTGACCATATCAACTTCGACACCGGTGAAATCAATAATCAGGCGGTTGTCTCGGTGAACGAAAATAATCAGTTGGTTACGAACCTACATTTCCTCCTAACGAATGGCCTGGTAACGATACAAACTGAGGAAACGTTATTGTCGCAATCACCCACAGCTGTGAACAATACGCAGCATCGTCTGTCTATTATCTCTGACGATGCCGAGTGTTTGTCTACCAGACTTGACACTGCACCCAGCGCGACGCATAACGGGACTGCCAACGAAGCAATTTGTGTGGATCAAACGATAAAACCGGATCAGTCGAATCTTTTAACGGTAGCAGGTTCGACTACGCAGCCGGAATTATTGGCGAAGGTTTCCGTGGAAAAACCATTATCGCTGAAAGCAGCCAAGCCAACGATTAAAGGGCATTCTTCCAAAGAATGTGACATTTGTGGGAAAACCTTTACGAAACCGTATCAGGTCGAAAGGCATAAACGAATCCACACCGGTGAACGGCCATACAAGTGTGACTTGTGCACGAAGTCGTTTGCTCAAAAATCGACCCTGCAAATGCACCAAAAACACCATACTGGTGATCGACCATATGCTTGTCCTTACTGCGAGTATTCGTTCACCCAGAAGGGCAATCTTCGGACCCACGTGAAACGTGTTCATCAATTAGATACCGCCGATGtaaaaaaatggaaacgcgTACGACAGTCTTTCGTGCCCAAAATATCAATTGAAGAAAACACGATTGATACCAAATGTCTAACATTGGACGACATATCGTTGGTCGAATTTCTTAAGTAG
Protein Sequence: MEKMLTRHNMIAETPHVEAIPINLIATEDGRTLLAVAERKDGVLEIVAAPVTFVGQSTTTTSLVDVKHLNGNLILHSPIFQMNVEDVSGAEFGQSMENLDAECDVVDSLRPSSPLEIKCKKKGKLELQSHPWADSLVDHGLDNADEQNVIATPTKTNNLGRPKKSPSISLQSTDRLKCEICHQEFVKQSLYRKHMDNHAEEKPHRCPKCSASFNVPTNFTLHMATHNTGEPKCPECGKKFARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWATEEVRKCKLCNKQFSQPALYRLHIREHYKLQTKIVKQTKRGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTVCSRAFTQKGSLQIHTWQHNGIRPHGCELCNAKFSQKGNLNAHIMRVHNVPEGEPIYGCNYCTCVFKKLGSLNGHMKRMHTDINEETATIDSTQSDGMESDIRATVNNVINQLASLESNTSETTRSPNFESAALSQTVTKKDILQQALRNSGLPSKNKTAIEGISEPRTLEARTNFVTLLDRGPDGGTRKYLTIKQRCVGNIRWYACSFCHKEFKKPSDLIRHLRVHTQEKPFKCTYCYRSFALKSTMIAHERTHSNTKRYACGSCEKSFVCHGSLIAHTRLHTKSNVTDEKSTVNNKKSNVADTNGSSSTYSAYQSRTQAKAKSKLSPEAQNLIPQVVLQEPLVISDAGNKICVAQVPSKEKRAHDIAADPARPYKCWVCQAAFRKISHLKQHHRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDTRPYGCSICNAKFSTQSSMKRHLVTHSNRRPFMCPYCHKTFKTYVNCRKHMKIHKHELAERQLEEQKFEIQVQDSEKTNANESCTQNSSLDTSYTSTVSIASVAPTCNSTTTSAIVTTSPSVYSDNLALSRIGSVEISFQPQLGSEFSQTLAEFQNITGEKRKARPALPGNCDATAFIDQNVSGIAVANLENSQILHPDEAGSVTLPVYTGDQALTPESIRDIEETLNQQFLNIGLNLRLGTNQTKHSHSTNAATVFGNTKEQQRHQPILNVIYENNNSSNNNVESTADHVFSSQLDPFEMDHIALQSDADVEIGLDTSSSNSISSILPRSVKEDRLSVSVTTPNNISTDASGRSSMQTIVFISQENFGRKEDPGTELGMEHINRDSGQQQCTINPILLTEEFREIPQDSKIQLNLNVASPDAPEMMKTTIDKISRVESLLQCHMCGQQGFAAAGLKEHLTSHRGTKEYQCTECFSRFCTNGGLNRHSKIHVTKQSLKCPSCEKYFNDRLQLRSHSKIHETTMWNAIPSGGDSVEGNTIPSLEVQSMVNDSTPSNYIALDSDAAVSEKVLLDTVAEKEVMDRLQNDLMDPGERKEYTNRCKYCPKTFRKPSDLIRHIRTHTGERPYKCDYCSKSFAVKCTLDSHMKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFKCTICDSRFRTSGHRKVHLMKHAREHKENPKRKQKHLRVAAIAEVAADLEKCDEREERMGDCGPNQQLQEEHLPGATAGYSHLDAINIDTAAACLSDHINFDTGEINNQAVVSVNENNQLVTNLHFLLTNGLVTIQTEETLLSQSPTAVNNTQHRLSIISDDAECLSTRLDTAPSATHNGTANEAICVDQTIKPDQSNLLTVAGSTTQPELLAKVSVEKPLSLKAAKPTIKGHSSKECDICGKTFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACPYCEYSFTQKGNLRTHVKRVHQLDTADVKKWKRVRQSFVPKISIEENTIDTKCLTLDDISLVEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01069108;
90% Identity: iTF_01066402;
80% Identity: -