Ngoo013042.1
Basic Information
- Insect
- Nomada goodeniana
- Gene Symbol
- bab1
- Assembly
- GCA_963969485.1
- Location
- OZ018306.1:4060552-4062151[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-15 4.9e-12 45.3 0.1 3 45 341 383 339 383 0.92
Sequence Information
- Coding Sequence
- ATGGCGAGCACGTCGCAACAGTACTGTCTGCGCTGGAACAACCACCGGTCCAACCTCCTCACGGTGTTCGACGAGCTGCTGCAGAACGAAGCGTTTACCGACGTGACCTTGGCAGTGGACGGCGGCCCGTCCGTCAAGTGCCACAAGATGGTGCTGGCTGCCTGTTCGTCCTACTTCCAGACCCTCTTTATCGACCTCCCGTGCAAGCACCCCATAGTCGTCCTGAAGGACGTCAAGTACTCCGAAATCAAGGCCATACTCGAGTACATGTACCGGGGCGAGGTGAACGTGGCCCAGGAGCAATTGGCCGGCCTGCTTAAGGTCGCCGAGGTGTTGAAGGTGAAGGGCCTGGTGGAGGATCACGGCCCGCACAGCCGTCGGGAAGAAGTTGAGACGTCTATGTCACCCCCGCCGGCAATAAGCACCAGCACAACGAGCAGCGCCGCTCACAGCAGCGGGCATGTATCTCCGCCGCATTCCACCGGTAATTCCTACAACATCTACGGCAAATCGCCTCACGATCGAAGCAGTCGGCTGCCGCTGCCCATATGGCCGTTGTCGGGGCTTCCGATGGCACACACGAGCCCCAGCCATCACGGTGCGCCCCATCAGCACTCGGTCCTGTCCGCCTCCTACGACAACGGCTACGAGAACACGTCCATGAAACGCAAGAAGCTGTCCAGCATGCTGATGAGCAGGGACACGCCGATCCTGCGAACCGTGCTGGGCCAGGGCCACGCGGACAGCTCCCAGGGTATCCCGCTGCTGCCCGCGGACAGCCACGAGGGGGGCCACTTCAGGAACAGCAGCAACGTCTCGTCGAACGACAACGACAGACGCAGCAGCACCGACATGGCACACGGGGAATCCGCGCACAGCCCTTACACCGACGTCTCCATGATGGACGAGGACGACAAACAGGCGTCCCCGCAGTCCTATTCCGCCGACGTCAAGTCAGGAATTGTCAACTACGCGCCAGCCCAGAAGCCGGAGTGGAAACGGTACAAGCAGTACACGAGGAACGACATCATGTCCGCGATCGAGGCGGTGCGTTCGGGTATGAGCGCGTTGCAGGCCGCTCGAAAGTACGGTGTACCGTCCCGCACCCTCTACGACAAGGTGAAAAAGCTGGGCATAACGACGTCGCGGCCGTTCAAACGGGGAACGAACGGCAGCAGCGCGTGTTTCCCGTACGGGATCGGCGGTAACGCGAACGGCAGCATATACAGCGGCGCCCTCtccgagaacgagaacgagaacagCAGCCTGATCGAGAGCCCCGGTACCATACTCGACTCGTACAAATCCAGGGACGGCCCCATTGAGAGGGACATGGACGACGGGCGTTGCACCAGCCCCATAATACATTCGGCGAGACAGCAGACGAACGAGGACCAGGTCGAGGACCTCTCTGTTAGTCGTAAGTCTGATGTACGGGTGATAGTGCCGCCGACGACGGTCATTAAAACCGAGGTAGACGTCGACAGCGAGTCTTGCAATCACAATTAG
- Protein Sequence
- MASTSQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLAVDGGPSVKCHKMVLAACSSYFQTLFIDLPCKHPIVVLKDVKYSEIKAILEYMYRGEVNVAQEQLAGLLKVAEVLKVKGLVEDHGPHSRREEVETSMSPPPAISTSTTSSAAHSSGHVSPPHSTGNSYNIYGKSPHDRSSRLPLPIWPLSGLPMAHTSPSHHGAPHQHSVLSASYDNGYENTSMKRKKLSSMLMSRDTPILRTVLGQGHADSSQGIPLLPADSHEGGHFRNSSNVSSNDNDRRSSTDMAHGESAHSPYTDVSMMDEDDKQASPQSYSADVKSGIVNYAPAQKPEWKRYKQYTRNDIMSAIEAVRSGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGTNGSSACFPYGIGGNANGSIYSGALSENENENSSLIESPGTILDSYKSRDGPIERDMDDGRCTSPIIHSARQQTNEDQVEDLSVSRKSDVRVIVPPTTVIKTEVDVDSESCNHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01066339;
- 90% Identity
- iTF_01069062;
- 80% Identity
- iTF_01067699;