Basic Information

Gene Symbol
GATA-B
Assembly
GCA_963583965.1
Location
OY757228.1:6588629-6601694[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.4e-17 3.8e-14 52.4 3.2 1 34 727 759 727 761 0.97
2 3 1.2e-17 3.3e-14 52.6 3.6 1 35 781 814 781 815 0.97
3 3 4.7 1.3e+04 -3.7 3.8 1 19 850 868 850 870 0.85

Sequence Information

Coding Sequence
ATGAAGGATGCCGGGGCGAGCATCGGCGAGGAGGACGACGGGGAAACGAGCAGGCTGCTGTGCTTGGACAAGCGGGAAACGGCAGGAGTCGTTGGAATTTTTCGGCGGTCGCGGCTAGACCGGCAACTagagcaacagcagcagcagcaacaacaacaacaacaacagcaacaacagctAGTGTACGGGAAGCGTGGAGACGACGAAGGCGGGGACACCGTGGGCGTGCTGGAGGCGGGACAGcaggaaattgaaaatggCGCGGTCTTAGGGGCGAGCAGCATCGAAGCGGCAGCGATTCCCGTTTCGACGTGCCAGGAAAACGACGACAGCGCCGCGTATGGTTTGAACGCGCTCGGATACGACTCCCACGACTCTGTCCTACGAGAAAGGAATTGCACGGATCGGGACTCGGGCAGCTACGGTGACGGCGATCTAGCCGGTGCTTCTGCGAAGCTGGAGGATCCCGAACGACAGCGtcagcaacaacagcaacaacagcaacaacagcaacaacaacaggaACAGCAAGAGCAGCCCCACCGCAATCACCAtcgccaccaccaccaccgatTCCTTCGTCACGAACAGCACGAGCATCGGTCGGCGTACGGTCAGCTGGGGGCGAGAGAAGTATCGGTTTCCGAGGGTGGGGATAACGGACAGCGGAGCGAGGCCTCCGTGTTGCCGGAGGAAAATCGGTCTGCCAGTCACGCGCTTCGTTCGACGATGCATCGTTACGGTACCGAAGCGCTCTCTCCGACTACGACCGACCATCAACAGAGCCACCACCACCACAACCCTCATCACCACCACCatcagcagcaacagcaacagcaacagcaacagcaacagcaccATCATCATCAGCACCATTTACAGTCGGCCACGACCGAACCCAGCGCGCTTTCGTCGGCCGGTCATCGTCAATTGGAGGAACGGGATACCCAGTCGCAACCGGCGGCGCATCGAGCACACGTAGACGAGGACGTGGAGAGAGTTAGTGGTATCGCGGCAGCAATGAGAGGCGCTCGTGGAGACTTTACTCTCGGTGTGCTGTTCCCGAACCTCGGCACTGCCGGTGCCAGCAGTGGCGGCAACGAGGTCGTAGCCAACGACAGCCATCATcatcagcagcagcagcagcaacagcagcagcaaccgCCGCACCACCATCACCACCATCACCATCATCATCACCACCACTTGGACGAGGTGCTGCCCGAGGACGCTTACCTCCAGCATCAGATACGAGGCAGCGGGGGCGCAGCAGGTGGTGGCGGAGGCAACGGCAACGGGAGCAACGGCGGCGGCGTGGAGGGCAGCGGCACAGGCGGTGCAGGTTCGCCGACTCTTCGAACCGGTAGTTCACCAGGTTCCAGTCGCAGCCCGCACGACGACCAAGGACTCTCCTCGCCGCACCGTCACGGCCAAACTGACGGAGGATACAGTCCCAGCGATCAGGGCAGGCAATCGTACGCGCACCTGACAGCGATGCAGCCGCCTCCGTCGGTGCAAACGAGCCACGGACTTGGCCAGGAGTCCGACAGGGTGTCCGATCAGCTGTACATGGATTCGATTTACGGTCATCACGCAGCTGGGACCGGTCATCATCATCAGGATCCGGAGCCCGGTTCGCCGCAGTCGCATTCACCGAACGGTACACTGTCCAGCCCGATGTATCGTTCGATGAGCGGGGTAGGCGGCATGGCAGCCGCGAACGCGGCAGGAACCGGAGGTACTTACGGTCTTGCGTACATGACCGGCAGCCCCACGGAATTGACCGCCTCGCCTCAGCAGCTGTGGAACGCGCAAGGTTTGGGCCTCGCGGCCATCTCCGAGGATTACGGAGGCGGCGGTAAATCGTCCGGATCGGTGACCCATCAGGCCCTCCCGGGCTTCTCGCAGCCGTTTTGCGGCAGGGCAAGCTTCCGAGGATACAGCCCGTCTTACTCGACTCAGCAGGGCGGTACCGGGGTCGGAGCTGGCGCGGTCGACGCATCCACGTGGACTTACGCTTCGCCGTCCAACGACTCTCTCACGACCCAGTACGCGACGCCGTCCAGACGACAGACCGTCAATCCGGCGTCGACGCCTACGCAGCATCAGCTCACCGCTACGGCCAATCTTAGCGCAATGCACAACATCGAGGCGGAATACTTTACGGAGGGCCGCGAGTGCGTAAATTGCGGCGCAATCTCCACTCCGCTATGGCGACGAGACGGCACCGGCCATTACCTGTGCAACGCATGCGGTCTCTACCACAAGATGAACGGAATGAATCGGCCCCTGGTGAAGCAGCCGCGGCGATTGTCGGCATCGAGACGGGTAGGCACTTCTTGCAGCAACTGTCAGACGACGATGACGTCGTTGTGGCGTCGGAACGCCCTCGGCGAGCCCGTGTGTAACGCGTGCGGCCTCTACTTCAAACTGCACAACGTGAACAGGCCGCAAACCATGAAGAAGGACAGCATCCAGACGCGAAAGCGGAAGCCCAAGGGTGGCATGAAGTCCACCGATACACCGATCTCTGGGGCGGTCACGATGTGCACGAACAACAACACCACCAACACCGCCAAcatcaacaacaacaacaacaacagcaataCCAACAACAACAATTTGAAACTGGAACCAGACACCTACGGGGCCTTGAGAATGAACCACTCCGGCGTGCCGGTTACCTACGGGAGCAACCTCTACGACAGCCCGCAGTCCTCCGCCCGGATCGTCTCCTATCAGTCGCCAACCACGCCCGGGATCTACTACGACATGATCACTTCTCAGCAGCAACAGCACCAGCCTCAGCACCAGCATCAGCATCACCAGCAGCTTCTCGAGACCCACTCCCCGAAAGTCGAGTGCCCGTCCCCGCCTTGCACGAATCGGTCGCCCGTTATGATGTCCGCTGGTCATTCGCCCGACCATCACCAGCTCGCTACCCCGCACATAGTTACGCTCGGCAATTCGTCGCCCAGCACGGCGGCAACCAAGATCATCCTCGACAACGGCCATCTGGACAGACCAACGGTCGTCTCGATATCGTCCTAA
Protein Sequence
MKDAGASIGEEDDGETSRLLCLDKRETAGVVGIFRRSRLDRQLEQQQQQQQQQQQQQQQLVYGKRGDDEGGDTVGVLEAGQQEIENGAVLGASSIEAAAIPVSTCQENDDSAAYGLNALGYDSHDSVLRERNCTDRDSGSYGDGDLAGASAKLEDPERQRQQQQQQQQQQQQQQEQQEQPHRNHHRHHHHRFLRHEQHEHRSAYGQLGAREVSVSEGGDNGQRSEASVLPEENRSASHALRSTMHRYGTEALSPTTTDHQQSHHHHNPHHHHHQQQQQQQQQQQQHHHHQHHLQSATTEPSALSSAGHRQLEERDTQSQPAAHRAHVDEDVERVSGIAAAMRGARGDFTLGVLFPNLGTAGASSGGNEVVANDSHHHQQQQQQQQQQPPHHHHHHHHHHHHHLDEVLPEDAYLQHQIRGSGGAAGGGGGNGNGSNGGGVEGSGTGGAGSPTLRTGSSPGSSRSPHDDQGLSSPHRHGQTDGGYSPSDQGRQSYAHLTAMQPPPSVQTSHGLGQESDRVSDQLYMDSIYGHHAAGTGHHHQDPEPGSPQSHSPNGTLSSPMYRSMSGVGGMAAANAAGTGGTYGLAYMTGSPTELTASPQQLWNAQGLGLAAISEDYGGGGKSSGSVTHQALPGFSQPFCGRASFRGYSPSYSTQQGGTGVGAGAVDASTWTYASPSNDSLTTQYATPSRRQTVNPASTPTQHQLTATANLSAMHNIEAEYFTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGTSCSNCQTTMTSLWRRNALGEPVCNACGLYFKLHNVNRPQTMKKDSIQTRKRKPKGGMKSTDTPISGAVTMCTNNNTTNTANINNNNNNSNTNNNNLKLEPDTYGALRMNHSGVPVTYGSNLYDSPQSSARIVSYQSPTTPGIYYDMITSQQQQHQPQHQHQHHQQLLETHSPKVECPSPPCTNRSPVMMSAGHSPDHHQLATPHIVTLGNSSPSTAATKIILDNGHLDRPTVVSISS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01070734;
90% Identity
iTF_01069324;
80% Identity
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