Basic Information

Insect: Nomada ferruginata
Gene Symbol: -
Assembly: GCA_963583965.1
Location: OY757215.1:6909410-6915994[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.012 1.3 10.1 1.0 2 22 142 162 141 162 0.95

2 20 0.027 3 8.9 6.1 1 23 202 225 202 225 0.92

3 20 0.0013 0.15 13.1 4.6 1 23 537 560 537 560 0.95

4 20 6.2 6.8e+02 1.5 0.6 5 23 567 586 566 586 0.92

5 20 0.0045 0.49 11.4 1.5 2 23 592 613 591 613 0.95

6 20 0.74 82 4.4 3.0 1 20 641 660 641 662 0.90

7 20 0.0027 0.3 12.1 0.7 1 22 781 802 781 802 0.96

8 20 4e-05 0.0044 17.8 0.5 2 23 810 832 810 832 0.94

9 20 0.4 45 5.2 6.0 3 23 844 865 842 865 0.94

10 20 0.57 63 4.8 0.1 2 19 885 902 885 905 0.88

11 20 0.11 12 7.0 5.1 1 23 912 935 912 935 0.93

12 20 0.15 17 6.6 4.9 1 23 946 969 946 969 0.94

13 20 2 2.2e+02 3.1 0.1 1 16 1009 1024 1009 1027 0.91

14 20 0.87 96 4.2 5.2 1 23 1037 1060 1037 1060 0.94

15 20 0.0031 0.34 11.9 0.2 1 20 1128 1147 1128 1149 0.94

16 20 0.00083 0.091 13.7 0.5 3 23 1158 1178 1156 1178 0.96

17 20 0.002 0.22 12.5 1.0 1 23 1188 1211 1188 1211 0.93

18 20 2.7e-05 0.0029 18.4 0.2 2 21 1268 1287 1267 1288 0.93

19 20 0.0017 0.19 12.7 0.4 2 23 1296 1317 1295 1317 0.98

20 20 0.11 12 7.0 4.0 1 23 1327 1350 1327 1350 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.012	1.3	10.1	1.0	2	22	142	162	141	162	0.95
2	20	0.027	3	8.9	6.1	1	23	202	225	202	225	0.92
3	20	0.0013	0.15	13.1	4.6	1	23	537	560	537	560	0.95
4	20	6.2	6.8e+02	1.5	0.6	5	23	567	586	566	586	0.92
5	20	0.0045	0.49	11.4	1.5	2	23	592	613	591	613	0.95
6	20	0.74	82	4.4	3.0	1	20	641	660	641	662	0.90
7	20	0.0027	0.3	12.1	0.7	1	22	781	802	781	802	0.96
8	20	4e-05	0.0044	17.8	0.5	2	23	810	832	810	832	0.94
9	20	0.4	45	5.2	6.0	3	23	844	865	842	865	0.94
10	20	0.57	63	4.8	0.1	2	19	885	902	885	905	0.88
11	20	0.11	12	7.0	5.1	1	23	912	935	912	935	0.93
12	20	0.15	17	6.6	4.9	1	23	946	969	946	969	0.94
13	20	2	2.2e+02	3.1	0.1	1	16	1009	1024	1009	1027	0.91
14	20	0.87	96	4.2	5.2	1	23	1037	1060	1037	1060	0.94
15	20	0.0031	0.34	11.9	0.2	1	20	1128	1147	1128	1149	0.94
16	20	0.00083	0.091	13.7	0.5	3	23	1158	1178	1156	1178	0.96
17	20	0.002	0.22	12.5	1.0	1	23	1188	1211	1188	1211	0.93
18	20	2.7e-05	0.0029	18.4	0.2	2	21	1268	1287	1267	1288	0.93
19	20	0.0017	0.19	12.7	0.4	2	23	1296	1317	1295	1317	0.98
20	20	0.11	12	7.0	4.0	1	23	1327	1350	1327	1350	0.94

Sequence Information

Coding Sequence: ATGGCTCGTGTCCATGTTTATGAACGGGCGGTCAATGCTGTCTTTACGGGTAGCAGATTCGATGAAACATCAAATCTGTCCAATCACGGATTGAAAATTAAGGAAGAGTCACTCGATTTAGATAAGGACACGCCCGACGAGTCGTCATCAGATAATGAAAATACCGGAGATCgatgtaatataatatcacCTGAAGCTGAATCTTCAGATGGCGTTAATCGCACAGAAAATGAATGCGCCTCGGCGCAAGTTCCCAATGATTCcgaatataaaaaattgaatttttataaagtAGAACGTAAAAGCTTGTCATCGGAAGACTTGGCATCAAACGATATGCCACATTTTACATCAAATAAACAAGTTGATCAGGCTTCAAGCTTTTCACGCCGTAAGCAAATGGGAGTAACTAGGTGGATGTCAACTTGCAATATTTGTTTTCTAAGATTTCCACATAAAAAAGCTTTATCAATCCACTACAAAACGGTTAAAAATGAAGGGATCGGTTGCAAAAAGTGTAGCGCTTGGTTTATTGGTCGTACCTTGTGGTCACGCCACCAGAAGATGCGCAATTGTAAAGAATCATGTGATGCGCGGTTTAAATACGCGTGCAATTTTTGTGATCGAAAGTTTCCTACTAAATGTAACATTCAAAAGCATTTATTCCATTCTCATGGGGACTTAAtatattttggtaaaattgAAACTGTATTAACAGATAGTACTAATGATCTTGAGGCGAGAACTCCTGAAGCATCCGAAAAGTTGTATGGTTCTATCCATAAACTTAAAACAAAGTTCAGTGGTTCGAACGACACATGCGCGAGTAACTTATCTGATCCATACGGTGCCCGTTCGAAAAGATTCCACGGTCCAACGAGGACATCTTTCAAAAAATTGAAGAGTCCCAATACTTCACCCTCGAGGAAGATGGGGAATTCAAGCAGTTCATTCACAAAAAGATTGAAGTTCGATAACGGTTCGTGTAGTACACCTACAAAAAGGCAGAGGCAGACTATTCTTACAGATTTCATGTCGCTATGTAAAAGGGTTGAAAAAGTTGAGTGTGTTAGTCCAGAGAAAGTGACTGCCACAGAAGATGCTCCAGTATTTAATAATGGTAATGGTAGTTGCAATGAAACTCCTGCAGCATCAACGGCCCCAATAAAGACTGAGTTGTCCACGCCTGTTGAAATCCCTAAAATTAATACACCTCGTAGTGAAATACCATTTGTTCGAATACACATCGATCCCGGTATGATGATGGAATTATTAAGTAATAAGAAACTAAATACTGAACTTGAAAGTTCTACGACTTCTAGTGATAAATCGTACAATCTTAGATCAGAAAGAACGAGGCTTTCTGATTCAGCTATGTTTAGCGATTCGCCCTGCAAGAGAAGAAGAATGAATGATACGCCTAGGCAAAGTCGAAAATTGTCACAGGCCCAAAGGTTGAAGGccaaatttaattgcaaagaGTGTTCAGTTTATCTCGAAAGATGTGATAAAATTTTGATTCAACGGAACtataaattagaaaattgcgggaaatatacgaaatataaCTTACGGCAAGATATCGccaaagttgaccagaagcaGTTGTATCGATGCCATATATGCAGCAAGCACTTCTCCTTAAAGGAGAACATGCGTGAACACCTAGAACTATTTCATGTAGTTTATATGTCGAGCATATGCAAAGCGCGATATACATCTACGAATAAATTACTGAATCATTATTTTCGTCAACATGTCTCCAAACGCCAAGAATGCTGTGTATGTCGCGAGACATTTAAGTCGCTAGTATTATTGAAGCAACATATGGTCCTGCATTGCCTTAAGACCACACAATCAAAAAAGAAGGACACTCAATCAGTtgatattgaaattaattgcaacagaattaaaaagaaacacaaATGCAAAGGTTGCCGGAAACGATTTTGGTTACGTTCATGTTTGACTCAACATGGGCAGGTATGTAGCCGAATGAATGACCGAAAAGATGAAGAGAAAAATCCTCGCATAAAAGAATCACCGTCTTCGTTTTCGGAAGAAACAAGGGATCTGAAAGGTAACGTTACCGATGCTCAATACACTCTCGACTGTTCAGCACAGTATTCAACCAACGATCATCCTGTGCAGGCGCCTGATTTGACACAACGATTGTCTTTGACAAATGCAGAGTCTCCCAAAAGCGCCGTTTCAAGTAGCCCTATTAAAACTGATGCTCGCATTTCACCGTCATCACCTACGAATGGAGGTAATAAAAGATTAATCAATGGGATTGCATGTGTAAAGGGGTACCAACTAGACGTGTCAGGAAAAATCAAGTTTCCCTGTACTATTTGTGGGATACAGTTCCAAACATTTCAGAATTTGTGCATACATGAGCGCACCTTCAGCAAACCAGCCTACAACCGGTGCAATATCTGCGATACTACCTTCCCTACTAAAAGACTATTGCAACTTCACATGCTTGCGACTCATACACCTGCTTGTGCGGAGAACTATAAGTTATTCTGCAAATTCTGTAACCAAGGTTTTCATAAAAAGGGATATCTTCAGAGTCATGAGCGACATTTCCACATTTCGCAACCACCTAAATCATGGCCGAGCCCCGATTACCTCTGGAATTCCAGTCCAGTCTGCAATATTTGCAACTTAGTATTCGAATCCTACGAACGGTTCATCGAACACAATATGTACTACTACAAGGGCCAAGTTTTCGTGTGCACATTTTGTAACAAATCGTTCCAAGGAATGTATCAGCTTCATCATCACAACAAGTTAGTGCACAACCCGGAAAGCGCGCGGAAGTCGTACCTTTATACCTGCGATGTTTGCAACGAAGGGTTCAATTTCGAAACGCATTTCCATGCGCACAAATTACACGTTCACTTGTGCAACTCGAATATTAGGCAGCTATATGTAAATCCAATGCAAGATCACAATTATGCGTTGACATCTAGCAATATTGCGGAAACAAGAGAGCCTATGGGGGTACCTGCTAAAACCTACGCCTGTACCGTGTGCGCCTTGAACTTCACCAACGCGGAGGACCTATCTTTTCATGATATAGAATATTCCGTGGATGGTGACTTTCACTGCAACAAATGCAGCCGGAAGTGTCGCACCAGTGCAATCCTTGCCAAGCACCAGAGTTTGAATCACGCTGGCTGCGATATTAACCAGAGTTACAAGTGCCGTTTCTGCGGAGAAGTATCGACCACTAGTACATCCATGTTGTGCCACGAGAAACATTTTCACGGAAACAGTACAAATAATGCCACGAAAAATAATACGTCGACCCAACTAGCCAGGGATCGGACCTTTAACCTAAGCACAGATAAGGACGTGTTTATAGACGATACTTTTATGTGTTTGACTTGTGGAATGAAGTTCGATGACGAGATAAATTTGAAGCATCATTTATTGGAGTATTCCAATATAGGCGAATATGGCTGTAACATTTGCCAAAGAAAGTTTACTGAGCAATATTTACTGGAAGTACACAAAGCGAAACATGCCAGGGTCAACAGTACTTCATCTCCTCATCGATGCCCAATATGCAATGAAGAATTTACAAACGTGGCGAACATTCGGACACACGTGTTACATCTACACCGATACGAATCGTTCGGTACTAATAAAGGGCAACAAAACTCTCAGAACGCTAACAATGCTCAGAACAAGAAGAATCCTATTTCGTCAATTCTGTCTACAAATGTAACTGAGTCActcaatggttttgcatcccCTGCTGCTAATAGTGCGCTAAAGGAGAATACTGTGAAGTGTCCCGAGTGTGATGTAGCATTTAGCAGCAGCAAGAATCTAACGAAGCACAGGTCAAGATATGTGAACTCTGGGGATAACCAATGCACAATTTGCGGTCGCAGATTTCCTTGGGTCACATCACTCGAGCAACATTTACGTAAACACAACGCTGTTGAGAATCGTTTCTTGAAGCACAAGTGTTATCACTGCGAGGAAAGATTCCGAAGCTCTGTGGCTGTTTATTCGCATATCATTCACATCCATGGCAAAGACAAATTGGTATATTCTACTAGCGACGCAAGCAAGACTAACAACAGCAATGTTAACAAAAAGATCTCTACTTTGATCGAAAAGAGCCCGCCCGTGAAGAATCTTGCTGACAACTCTGAACCTTTAGCCATGCCTTCGAAAGAATATGAAAATGATCGAGATAAAATTTATAAGGCTGCCACGATTGTTAACGAACCAGCTGCAAATAAATGTGCAGAAATAAATGCGCCCGAAAAGACTGCGGTAggaaatgatattttaaaaaatgcgGTAAGAAAGTCGCTCCATGACTTGGGCCCCCCTACATTGAAAAACGTTCAACCACACTTTGATGCCATACAGGAAAAAGCTAGCGAAACTAGCGAAACCCCTTCAACTGAGGTAATTAGTAAGACTGAAGCAGATTCTACGATGAATAATTCGAATTTCGTTGGGGACGAGATTTTTCAGCGTATGCTAGAACTTCATAGTAATTGCGAATCATCTGGTTTGGTACTTAATCCTTCGATTGATAAGCACGATTCTGAGGCGATTGAAATTGTTTGGGAAAAGAATGCAAGTCTTGCAAAATGTGTACTGCTCAGCGATAGCGATCCGGATGTACAGATAATAAGGGAATGTCGTCAACCGTCTGTAATTCAGCAGAAGGAGAACAGTTTGTCGGTAAATTTAAAACCCCCGACCAGTGAAGTTGGACGATTAAAAGTCCGGTCGTTCGCAAAGATTGTTGACTGA
Protein Sequence: MARVHVYERAVNAVFTGSRFDETSNLSNHGLKIKEESLDLDKDTPDESSSDNENTGDRCNIISPEAESSDGVNRTENECASAQVPNDSEYKKLNFYKVERKSLSSEDLASNDMPHFTSNKQVDQASSFSRRKQMGVTRWMSTCNICFLRFPHKKALSIHYKTVKNEGIGCKKCSAWFIGRTLWSRHQKMRNCKESCDARFKYACNFCDRKFPTKCNIQKHLFHSHGDLIYFGKIETVLTDSTNDLEARTPEASEKLYGSIHKLKTKFSGSNDTCASNLSDPYGARSKRFHGPTRTSFKKLKSPNTSPSRKMGNSSSSFTKRLKFDNGSCSTPTKRQRQTILTDFMSLCKRVEKVECVSPEKVTATEDAPVFNNGNGSCNETPAASTAPIKTELSTPVEIPKINTPRSEIPFVRIHIDPGMMMELLSNKKLNTELESSTTSSDKSYNLRSERTRLSDSAMFSDSPCKRRRMNDTPRQSRKLSQAQRLKAKFNCKECSVYLERCDKILIQRNYKLENCGKYTKYNLRQDIAKVDQKQLYRCHICSKHFSLKENMREHLELFHVVYMSSICKARYTSTNKLLNHYFRQHVSKRQECCVCRETFKSLVLLKQHMVLHCLKTTQSKKKDTQSVDIEINCNRIKKKHKCKGCRKRFWLRSCLTQHGQVCSRMNDRKDEEKNPRIKESPSSFSEETRDLKGNVTDAQYTLDCSAQYSTNDHPVQAPDLTQRLSLTNAESPKSAVSSSPIKTDARISPSSPTNGGNKRLINGIACVKGYQLDVSGKIKFPCTICGIQFQTFQNLCIHERTFSKPAYNRCNICDTTFPTKRLLQLHMLATHTPACAENYKLFCKFCNQGFHKKGYLQSHERHFHISQPPKSWPSPDYLWNSSPVCNICNLVFESYERFIEHNMYYYKGQVFVCTFCNKSFQGMYQLHHHNKLVHNPESARKSYLYTCDVCNEGFNFETHFHAHKLHVHLCNSNIRQLYVNPMQDHNYALTSSNIAETREPMGVPAKTYACTVCALNFTNAEDLSFHDIEYSVDGDFHCNKCSRKCRTSAILAKHQSLNHAGCDINQSYKCRFCGEVSTTSTSMLCHEKHFHGNSTNNATKNNTSTQLARDRTFNLSTDKDVFIDDTFMCLTCGMKFDDEINLKHHLLEYSNIGEYGCNICQRKFTEQYLLEVHKAKHARVNSTSSPHRCPICNEEFTNVANIRTHVLHLHRYESFGTNKGQQNSQNANNAQNKKNPISSILSTNVTESLNGFASPAANSALKENTVKCPECDVAFSSSKNLTKHRSRYVNSGDNQCTICGRRFPWVTSLEQHLRKHNAVENRFLKHKCYHCEERFRSSVAVYSHIIHIHGKDKLVYSTSDASKTNNSNVNKKISTLIEKSPPVKNLADNSEPLAMPSKEYENDRDKIYKAATIVNEPAANKCAEINAPEKTAVGNDILKNAVRKSLHDLGPPTLKNVQPHFDAIQEKASETSETPSTEVISKTEADSTMNNSNFVGDEIFQRMLELHSNCESSGLVLNPSIDKHDSEAIEIVWEKNASLAKCVLLSDSDPDVQIIRECRQPSVIQQKENSLSVNLKPPTSEVGRLKVRSFAKIVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01070605;
90% Identity: iTF_01068526;
80% Identity: -