Basic Information

Gene Symbol
KDM5A
Assembly
GCA_963583965.1
Location
OY757216.1:10057365-10067603[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.4e-25 6.6e-22 78.2 0.0 2 89 109 192 108 192 0.94
2 3 3.9 1.1e+04 -2.6 0.1 49 81 826 856 823 860 0.64
3 3 3.6 1e+04 -2.5 0.1 49 65 1036 1052 1033 1065 0.71

Sequence Information

Coding Sequence
ATGGTATCGAGGTTCGACACGAACTTCGGTTGTGAGGATTTTTTCGGGACTTATCATTACACCCAAGACATGGCTTGTGATCGTGGTGATTCGGACTTCGAGTTCATCATACCGCCAGAGGCGCCGGTCTTCGAACCAAGTATCGAAGAGTTTCACGACCCCCTTGGCTACATTGCAAAAATACGGCCGATCGCTGAGAAGTCTGGCATTTGTAAGATCAAACCGCCGCCTAATTGGCAACCACCATTTGCCGTGGATGTTGATAAATTCAAGTTTGTTCCAAGAATACAGagattaaatgaattagaggCGAAAACAAGAATAAAACTTAATTTCTTGGATCAGATTGCAAAATTCTGGGAGCTTCAAGGTTCTTCTTTGAAAATTCCACTTGTGGAGCGCAAAGCTCTTGATTTATATTCTTTACATAAGAAAGTTACCGATGAAGGTGGAATTGAAACAGTTACAAGAGAAAGGAGGTGGGCAAAAATTGCTAATAAAATGGGGTATCCGTCAGGACGCAGTGTGGGAAGTATTCTGAAAAATCATTACGAACGTATTTTATATCCATTTGACGTATTTAGACAGGGGAAAACATTGACAGATATTAAAATGGAGCCAGATTCCAATGCAACTGAGAAGAAAGACAGAGATTACAAACCACACGGAATTATATCACGGCAACAGATTAAACCGCCGACTGAGAAATTTTCACGGAGGTCGAAGAGATTTACTGGACAAGAAGAAAAACCGGAGGTGTCTGTGAAGCAGGAGGAGTGCAAAGAAGAGTGCGATTCTGATAGCGATTGCAAGGAAGGaattaaaatgataatttgcGATGATAAAGATAATAGTAAGGAGCTgagaaaattacaattttatgGGGCCGGTCCAAAAATGGCTGGATTTAATACCAAAGAGGCGAAGAAATCTAACGCTTCTAATAAAACTAGAGGCGTCAAGCTTGTTTATGAAGTTGATCCTCTGGCAAAGTACATTTGTCACAATTGCGGAAGGGGTGACAACGAGGAAAGCATGCTTCTATGCGACGGATGCGATGACAGCTACCATACTTTTTGCCTTATGCCGCCATTAACAGAAATACCAAAAGGTGATTGGAGGTGTCCCAAATGTGTTGCCGAAGAAGTATCCAAACCGATGGAAGCATTTGGATTCGAACAAGCGCAACGAGAATATACTCTTCAACAATTTGGAGAAATGGCTGATCAATTTAAAAGCGATTATTTTAACATGCCTGTACACATGGTGCCAACATCTCTGGTAGAAAAAGAGTTTTGGCGAATTGTTTCTTCGATCGACGAAGATGTGACAGTTGAATACGGAGCTGATTTGCATACAATGGATCATGGATCTGGGTTTCCCACAAAAACGAGCGTCAATTTGTTTACATGTGACCAAGAATATGCTGAATCTTCGTGGAACTTAAATAATTTACCTGTTTTGCGGGGAAGCGTGTTGGGACATATTAATGCTGATATTAGTGGTATGAAAGTACCGTGGATGTATGTTGGAATGTGTTTTGCAACATTCTGTTGGCACAACGAGGACCATTGGAGCTActcgattaattatttacattggGGCGAACCGAAAACATGGTATGGTGTACCAGGCGCTCAGGCAGAACGATTCGAGCATTCAATGAAATCTGCTGCACCAGAGTTATTTCACAGTCAACCAGATTTACTCCATCAGCTGGTTACAATTATGAATCCTAATATTTTAACAAACGAAGGTGTTCCAGTATTTAGAACCGATCAACACGCGGGTGAATTCGTGGTAACATTTCCGAGGGCGTATCACGCAGGTTTCAATCAGGGATACAACTTTGCCGAAGCTGTGAATTTCGCGCCAGCTGATTggcTTAAAATTGGCCGAGAATGTATCACACATTATTCGAATTTAAGACGATTTTGTGTTTTCTCTCACGACGAATTAGTGTGCAAAATGTCATTGGAACCGGATTCATTAGATATAGGAATTGCAACAGCAACTTACCACGATATGCTTCAAATGGTGGATGATGAGAAGAAACATCGAAAAAATTTATTGGAGTGGGGTGTAACAGAAGCGGAGAGAGAAGCATTTGAACTTTTACCAGATGATGAGAGACAGTGCGAAACGTGCAAGACGACTTGTTTCTTGAGTGCAGTTACATGTTCATGCCAAAGTTCTCAGTTAGTTTGTTTAAGACATTTCACGGAACTGTGCGATTGTCCACCGGAAAAGCACACACTGCGTTACCGCTATACGTTAGACGAATTACCAATTAtgttacaaaaattaaaattgaaagcgGAGTCGTTCGACTCGTGGGTGACAAAAGTAAAAGAGGCGATGGATCCTGATAAGAAGACCgataaaattgaattgaacGAATTGAAGGAACTTTTAAACGAAGCAGAGAATAAAAAATTCCCAGAAAGCGAATTGCTTACGGCTTTGACAACTGCGGTACAAGATGCTGAAAAGTGTGCAAGTGTAGCGCAACAACTGTTGAATAATAAACAGCGCACAAgAACCAGGCAATCAGTTGAAACTAAATACAAGCTTACAGTAGAGGAATTAACTCTCTTCTATAAAGAAATAACAAATTTATGCTGCGAACTTAAAGAATCTGACGGAGTAAAGTTCATACTTGATCAAGTATTACAATTTCAAAAGGAGGCAGAAGAATTGGATTCTAAAGAGGATAATTGCGACATAGAACAGTTGGACAAATGTATTGAGTTTGGGGATTCCATTTGTATCGAATTACCGCAACTTACACGATTGAAACAAAGGCTAGCGCAGGTACAATGGCTCGAGGAAGTAAAATCTGTGCAAGAGGATCCAAAATCTGTACATCGCGATGATTTAGCAAAGTTGATCGAAAAAGGCATGACAATACCTCCACATTTAAGCATAGAAAACACTCTCTCCGAGCTGCAATCGTTAATGCTTGCGATTGATAACTGGGAAGAAAAAGCAAAGCTGTACCTTCATACGAAAAATAGACAAACCATTTCATCTTTCGAGGAGTTTATAGACGAGGCCGATAAAGTCGAAGCTTATTTACCTAGCTTAGATGTTCTGCAAGACACACTGAATAAAGCAAAAAATTGGACGAAGATGGTGCAAGAAGTACAAGCAAGggaaaatgtttcatattATAATACGTACGAGGATTTAATTAAGAGAGGGAGAAATATACCATTGCACCTAGACGCCCTCCCAATCTTAGAGTCTACCCTTTCGCAAGCAAAATCCTGGAAGGAGAGGACAGCAAGGACATTCTTAAAGAAAAATTCGCATTACACGCTAATGGAAGCTTTGTCACCGCGAATCGGCGTTGGTATGCAGGCGTTAAAAGCTAAAAAGAGTAAGAGTGAAGATTCTGTAGGGCCCGTTTTGGTCTGCGATACGAAACTGGACGATTCCAATGACTCGGCCACAATTGTTGCCGCGTTCAAACTAGCCGAGCAACGCGAGATGGAGGCGATGAGAAATTTAAGAGAGAGAAACTTAATGAAAACCGAAATAGACGATTCGAGGTATTGCGTTTGTCGTCGACAAAGATTTGGACTCATGCTGCAATGCGAGCTTTGCAAAGATTGGTTCCACTCAAATTGTGTACCACTGCCGAAAACATCGTATAAAGGAAAATTACCATTGTCGAGGGAAATCAAATTTTTGTGTCCCTGTTGCTTACGTTCACGGAGACCACGATTAGAAACCATTTTGTCGCTTTTAGTCAGTCTTCAAAAAATTGCAGTCCGTGTACCAGAAGGCGAAGCGTTACAGTGTCTAACAGAACGCGCAATGAATTGGCAGgatCGAGCTCGGCAAGCACTTGCTACGGATGAAATCTCGTCGGCACTAGCGAAATTGTCTGTGCTATCACAAAAATTAGTCGAAGCAGCGGCAAGGGAGAAGACGGAAAAAATTATCAGCAGTGAATTGAAGAAAGCAGCGAATAACCCTGAACTCCATCAAAGGGTACAGGCAATCGCGCCACTTAGCGGTGTGCATTCAGATGATAGTGCTCTTAGTACTGCAGACGATGACGACGATGTTGTTACTATAGATGATGATGAGCCAAGTTGCAGTACGTTCAATAGCAATGAACACGCATATTCATATATATCTAAAATTCAACGGAAGGCACAATCAAATGATTCAGCCGAGGTTGCTGTTGTACTCTCACAGTCCGCGAGGCTACGCCTAGAAGAATTAATGATGGAAGGCGATTTGTTAGAAGTTGCACTGGATGAAACGCAACACATTTGGCGTATATTGAGCCATACGAATAGTCCCAGCACTGTTCGAAAGTACGCGTCCTATGAAGAAATTCAGGTTAATGCAAATCAAGACACCAAGGATGTGAAGAAGCGTGGAAGGAAACGAAAGTCTGACGAATTCGAATTGTTGAAAAAGCTTGGGAGACAAAAAATGGAAGAGAAACATTTAGCTAAGCGCAAGGGAttgcagaaagaaaaaaagatcgTTAGCTCACCGTTGCCAGTAAAGCGTGGACCACGAAAGaTGAAACGCAAAGAAGGCGAAGATGGTCCAAAGAAAAGAGGTGGTAACAGAAAGAAAACTAAACAAGATACTTCGGACGAAGAAGACGATTGCGCGGCTGTCAATTGTTTACGACCCAGTGGGAGGGAAGTCGATTGGGTACAATGCGATGGTGGCTGTGAAGGTTGGTTCCACATGCATTGTGTTGGATTGGATCGTACGGAAATTGCCGAAGAAGACGATTACATATGCAGTAATTGCAAAGATGCGGAACAAAACTCAACTTCAAGAGTGCCAGATCCTCTAGCTGAATCATTAGGCCTGGATGCacttctttccctttctcaATCTCAGGGATACCAGGGGACGGACAGTGAGGCGGACATTCAAGAAACGACATCCTTCGTCAGGACTTACTAG
Protein Sequence
MVSRFDTNFGCEDFFGTYHYTQDMACDRGDSDFEFIIPPEAPVFEPSIEEFHDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKKVTDEGGIETVTRERRWAKIANKMGYPSGRSVGSILKNHYERILYPFDVFRQGKTLTDIKMEPDSNATEKKDRDYKPHGIISRQQIKPPTEKFSRRSKRFTGQEEKPEVSVKQEECKEECDSDSDCKEGIKMIICDDKDNSKELRKLQFYGAGPKMAGFNTKEAKKSNASNKTRGVKLVYEVDPLAKYICHNCGRGDNEESMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGAQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRECITHYSNLRRFCVFSHDELVCKMSLEPDSLDIGIATATYHDMLQMVDDEKKHRKNLLEWGVTEAEREAFELLPDDERQCETCKTTCFLSAVTCSCQSSQLVCLRHFTELCDCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPDKKTDKIELNELKELLNEAENKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVETKYKLTVEELTLFYKEITNLCCELKESDGVKFILDQVLQFQKEAEELDSKEDNCDIEQLDKCIEFGDSICIELPQLTRLKQRLAQVQWLEEVKSVQEDPKSVHRDDLAKLIEKGMTIPPHLSIENTLSELQSLMLAIDNWEEKAKLYLHTKNRQTISSFEEFIDEADKVEAYLPSLDVLQDTLNKAKNWTKMVQEVQARENVSYYNTYEDLIKRGRNIPLHLDALPILESTLSQAKSWKERTARTFLKKNSHYTLMEALSPRIGVGMQALKAKKSKSEDSVGPVLVCDTKLDDSNDSATIVAAFKLAEQREMEAMRNLRERNLMKTEIDDSRYCVCRRQRFGLMLQCELCKDWFHSNCVPLPKTSYKGKLPLSREIKFLCPCCLRSRRPRLETILSLLVSLQKIAVRVPEGEALQCLTERAMNWQDRARQALATDEISSALAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSALSTADDDDDVVTIDDDEPSCSTFNSNEHAYSYISKIQRKAQSNDSAEVAVVLSQSARLRLEELMMEGDLLEVALDETQHIWRILSHTNSPSTVRKYASYEEIQVNANQDTKDVKKRGRKRKSDEFELLKKLGRQKMEEKHLAKRKGLQKEKKIVSSPLPVKRGPRKMKRKEGEDGPKKRGGNRKKTKQDTSDEEDDCAAVNCLRPSGREVDWVQCDGGCEGWFHMHCVGLDRTEIAEEDDYICSNCKDAEQNSTSRVPDPLAESLGLDALLSLSQSQGYQGTDSEADIQETTSFVRTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00873598;
90% Identity
iTF_00141055;
80% Identity
-