Basic Information

Gene Symbol
NCOR1
Assembly
GCA_907165295.1
Location
OU015688.1:17713442-17734498[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.4e-08 2.7e-05 24.3 0.0 3 43 744 784 743 787 0.96

Sequence Information

Coding Sequence
ATGGAGACAGTGGGCAAGCAAGTCCAGGTAGTGAGCGGTCTGGGGGTGGGGGGTCCGGTGGGCCCTGTGGGCCCAGTGGGGGCAGATTTGCATCACCATCATCATCCTCACCCCCACTCTCATCCTCCACACCCACACGCCCACCCCCACGGTCATCCTCATGGGTCCCATGGCCACTCACTGGTTGGCGTAACGTCGACCCCTGGCAGGGGTCAGACACAACCACCGGTCTCGCATAACCAGCATTTACCCGCGAGATCTACTCCGGTACAGCTGCACAGGCCGGCGCAGAGTTACGTAAACATCAAGAGCAGCAGTCCCGTGTCTCCAAGAACGATAGGAGCTGGAGTGACGTACGTCCAGGGTAGCGCAGTTGTATCTTCTGCGGCGGCGGCTGGGGCAGCCGGAAGTGGAAGTGGTGGAGGTCCTCCTCCAATCGGTGGTGGCAGCGGTGGCGGTAGCGTGAACAACGCCGGTGGCGGGAACAGCGGAACCGGAGTCGTTGGGGCTGTAGCTGGTGCCGGTGCCGTAGGAAGCGTACCAGCAGCAGGAAGTGGGAATAGTGGCGGTAGCAGTAACAGTGCCGGTGCAGGGAGTAACAGTGGCGGGAACAGCGGTACAGTGGGTGGTGCACCAGGAGGTTACGTTACTGTGCCCATGGCTGGTGGTCTGCGGTACATCCATCCGTATCCGTCGACGCCGACGCCGACGCCGACCTCGGTGTCGGTGCCGGTTGCACCGACAATGGTTACCTCGGCCTCGTCGGCACCGACTCCTGTGCCAGTTCCAGCACCCGCGGCCGCACCTGTCAACCCACCCACAGTTAGTCAAACGCCACCACCATCGCTCTCGGGAACTGCTTATGCCGCGAGAGATGCATACCGCAGCGCCACCACAAATGTGAACGAGAGGATCGCCATCAGCGTGAGCAGCAGTCCTCTGTCGCAGATAGGAGTCGGTGTTGGAGTTGTTACTGCCGATTATGTGGCGAATAGCGGTATAGGTAGTGGCATGGTTGGTGGAAGAGGGGATAGACCGAGGATATCTCTTTTGCCACCTGCCTCGGTGACAACGACACCTTCGCCAACAGCGCCAGACTATCAGCACGTGTCAAGAAATTCACGAATAGGCCTGATGCCCGTCCAGCCTGATCAGTATTGCAGTCGTACGGCTATTGAAATGGCCAATCTGCAGGAGGCGCCGCCCTTCAAGAAGATACGCCTCAGCCAACCTACACAGTTTCAATTGCAATCCCAATCGCAATCCCGCTGTCAGAGTTTGTCACCTGCTGACCCGTGTATTAAGCAGGAGCACGTGATGCAGTTGCAGCAACCTCTTAGGATAGATACTAGGGGGCAGCCGACAACAGGGGCGTATACACCGCAAACAGAAGCTATCTCGCCTACGCTTCCGGAACCAAACACACAAGAAGATGCACAGTTCAGAAGCACCAAGGACGATCTTTTGCAGCAAATTGCCAAGGTCGACAGGGAGATTGCAAAAAGGGAGTCTCAAATAAATAAGCTTCGGAAAAAGCTAAAGGAATTAGAAGAGACGGCGAGTAAACCTCTGGAAGCAAGCGGTCTCAAGAGACCGGTTGAGGAACAGTCTCAACAACCAAAGCATCAGTCTCTGGCACAAAAAATTTATGCTGAAAATAGGAGGAAGGCAGAAGAGGCTCACAGACTACTTGAGAGGCTGGGTCCAAAAGTGGAGTTACCTTTGTACAATCAGCCGTCTGATACAAGTGTGTACCAAGAAAATCGTACAAAACATCAAACGTGTATGAGAGCAAGGCTTATAGCGAGGCTCCGGCGAGAACATGCTGAACGCGCATCTCTTCATCGACAACAGTCACAAACCTACGCTATTTTGGTACAGGAGTGGCATCGTAAAGTAGAGAGATTGGAAGCAACGCAGAAAAGGAAGTCGAAAGAAGCGAAAAATCGCGAATTCTTCGAGAAAGTATTTCCAGAGTTGCGAAAACAAAGGGAAGACAAAGAGCGTTTTAATAGGGTCGGTGCTCGTATTAAGAGTGAAGCTGATTTAGAGGAAATTATGGACGGCCTTCAAGAACAAGAGATGGAAGATAAAAAAATGCGATCTTACGCAGTTATACCTCCTTTGTTATTGGATACAAAACAAAGACGAATCGCGTTCCAAAATCGAAATGGTCTCCTTCAGCCGGAAGAATTAGAGGCTCTTCATAGCGAACGAAAATTAATCAACGTATGGAGTTCTGTAGAGCATGAATTGTTTAAGGAAAAATATTTACAGCATCCTAAGAATTTTGGAACGATAGCTCAATCTTTAGAACATAAGTCCGTTCCAGATTGTGTGCATCATTACTACCTCACTAAAAAAGCAGAAAATTATAAGCAACTCTTGCGAAAGTCGCGGCAACGAACACGTAGCTCTCGGAACAATCCTAATAATAAAGTAAATAATACCAGTTCGAGTATTGGAACTCTAGACATTTTAACTACGGGTGTTACGACAAGGTTGCAACGTGAACAACAGCAGAAAACGCAAGAGAATCCGCAGAATAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACCGCTGCAGCAACTATAGTGACCAGCTCGACAACTCCTTCAAGTTCATCAACGTCGAGTATATGTTTAACAACAGACTCCGTAATAGCATCAACGACATCTACAACGACATCGGTGTTGAATACGACGACATCGTCTGTTACGACGTCGTTGACGGCAACGAACACGAAGGATAACAGAGACACCAACAAGGAAAATAAAGAAATTAAAATCGAACCGAAGGATCCACATCTTATTAAACTGGAAGTGAAAGAAGAGCCGCAATTAAGTTCCGAAACGATATCAGGAAAAGACGTCAAAGTAATAGTGGACGGGAAGAGTGCGTTGTCGATGTCATCGTCGTCGAACGTGAATACGACGAACGGCACGGCGATACAGTCAGATTTCAAAGATTCTAACAAAAAGAAACCGGGTTGCAGGGAGACAAACAACGGCGGCGGTGGCAGCGTGACGACCGCCAGCAGGATGAAGGAAAAGAAAAAAGATAATCATGCCACCCCCATGGAAACCAGCGACGAGGAAGCCCAATCAATGGACACCATCGGTAAGTTTCATTAA
Protein Sequence
METVGKQVQVVSGLGVGGPVGPVGPVGADLHHHHHPHPHSHPPHPHAHPHGHPHGSHGHSLVGVTSTPGRGQTQPPVSHNQHLPARSTPVQLHRPAQSYVNIKSSSPVSPRTIGAGVTYVQGSAVVSSAAAAGAAGSGSGGGPPPIGGGSGGGSVNNAGGGNSGTGVVGAVAGAGAVGSVPAAGSGNSGGSSNSAGAGSNSGGNSGTVGGAPGGYVTVPMAGGLRYIHPYPSTPTPTPTSVSVPVAPTMVTSASSAPTPVPVPAPAAAPVNPPTVSQTPPPSLSGTAYAARDAYRSATTNVNERIAISVSSSPLSQIGVGVGVVTADYVANSGIGSGMVGGRGDRPRISLLPPASVTTTPSPTAPDYQHVSRNSRIGLMPVQPDQYCSRTAIEMANLQEAPPFKKIRLSQPTQFQLQSQSQSRCQSLSPADPCIKQEHVMQLQQPLRIDTRGQPTTGAYTPQTEAISPTLPEPNTQEDAQFRSTKDDLLQQIAKVDREIAKRESQINKLRKKLKELEETASKPLEASGLKRPVEEQSQQPKHQSLAQKIYAENRRKAEEAHRLLERLGPKVELPLYNQPSDTSVYQENRTKHQTCMRARLIARLRREHAERASLHRQQSQTYAILVQEWHRKVERLEATQKRKSKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVIPPLLLDTKQRRIAFQNRNGLLQPEELEALHSERKLINVWSSVEHELFKEKYLQHPKNFGTIAQSLEHKSVPDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNTSSSIGTLDILTTGVTTRLQREQQQKTQENPQNNXXXXXXXXXXXXXXXXXXXXTAAATIVTSSTTPSSSSTSSICLTTDSVIASTTSTTTSVLNTTTSSVTTSLTATNTKDNRDTNKENKEIKIEPKDPHLIKLEVKEEPQLSSETISGKDVKVIVDGKSALSMSSSSNVNTTNGTAIQSDFKDSNKKKPGCRETNNGGGGSVTTASRMKEKKKDNHATPMETSDEEAQSMDTIGKFH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00220520;
90% Identity
iTF_01068237;
80% Identity
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