Basic Information

Gene Symbol
osa
Assembly
GCA_905220335.1
Location
LR999914.1:9969013-9981486[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.8e-26 2.9e-22 79.6 0.0 2 89 24 108 23 108 0.94

Sequence Information

Coding Sequence
ATGAGTGTGTCCCTGCGCCAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGACGCGCCCGAGCGGCGCGGCTGGGTGGAGCGCCTGCTGGCCTTCATGGACGAGCGCCGCACGCCCATCGCCGCCTGCCCCACCATCTCCAAGCAGCCGCTCGACCTGTACCGCCTGTACCTGCTCGTGCGCGAACGGGGCGGCTTCGTCGAGGTGACGAAGAATAAGACGTGGAAGGACATCGCGGGGTTGCTGGGTATCGGTGCGTCGTCGTCCGCGGCCTACACGCTTCGCAAGCACTACACGAAGAACTTGCTCGCGTATGAGTGCCACTTCGACCGCGGTGGTATCGACCCGCAGCCCATCATCAACCAAGTTGAAGCTTCCACCAAGAAAAAGAGCGGCAAATCCAATAGCACGTCCAGTACAGCAGGATCATCAAATTCGCAAGAGTCATTCCCCAGCGGCGGCGGCGGCGCCGGCGGCGCGGGCGGCGCGGCCATGGACGGCTACGCGCCGCAGTACGCCGGGTACCCGCCGCAACCCAACCACTCGCAAGGCGGCGGGCCCGGCGGCGACAACCTAGCCGCCTCCAACCCGTTCGACGAGCCGCCGGGGCCCAGGAGACCCCCAGGTTACCAACAAGGCTACGGGTATGAATACGGATCTCCTTACCAACAAAATAGGCCTGTTTATCCTCCTTATGGTCCCGATGGTGACAGAGGGTACCGAGGCGGGTCCGTGGGGTCGGTGGGCGCGGTGGGCGGGCCGGGCGCGGGCGGCGAGTACCAGCAGTACGGCGCCTACGCCGGCGCCTACCGCGGCGCCGCGCCGCCCGCCGCCACGCCGCCGCCCGCGCAGCCCTACCCCGACTACTACCGCGCGCCGCACCCGCAGCACCCGCAGCACCCGCACCCGCCGCACGCGCCGCACCCGCAGCACCCGCCGCACCCGCAGCACCCGCCGCACCCGCCCATCTCGCCGCAGCAGCCGCCGCATGAGTACGGCGGCGGTAAGGCGCTGGCAGGCGCGCCCGCAGTGGCCGGCGCGCCGCGCAGACACCCCGACTTCGCCAAGGGCGAGCCCGCGTACGGCGGCGCTGGCGCCGGCGCACCCGCCCCCGGCGCCGGCGCGGCGCAGGCGGCTCCGGGCGCGGCCGCGCGCTTCGGCGGCGCCTGGGGCGGCCAGTTCCAGCGCGCGCCCGCGCCGCCCGCACCCGCCGCGCCCTGGCGCCCGCAGCCCGGCGCGCCGCAGCCGCCCAACTGGACGCATCCGCCCTACTCCAACACGCCGAGTGGAGGTCCTCCTGCGTGGGGAGGTGCACCCCGGCCGCCGACGCAAGACCCCTACAACTCCACCGCGCCCTCACCGGGCTCGGCGCCAATTATGACTGCTCCCGGACAATTAAAACGGGAGCTAACATTCCCTGCCGAGTGTGTGGAAGCGGCCGTGCCGACCGGCGAGAAGCGGAGAAGACTCGCCAAGGCAGACGTCGCGCCCGTCGACGCGTGGCGGATCATGATGGCGCTCAAGTCCGGCCTGTTGGCCGAGACCTGCTGGGCGTTAGACATCCTCAATATCCTCCTCTTCGACGACAACTGCATAGGATACTTTGGCCTACAGCATATGCCAGGCCTGCTCGACTTATTACTTGAACACTTCCATAAAAGTTTAAGCGACGTGTTCGATTCGCCGTCGAACGAAGACGGACCCTGGTACGCGCCGCCCACCAGTCCCGAGCCCGTGATCAAGAGCGCGAAAACGACGAGAGAACCGCGGGAGCCGCCCGACCCGGCCGACCGAGTGCGCTTCCTCAACGGAGAGAACTACACGCTCGAGTCGCGGCGGCGGCATCCCGTCATGTACAAGCCTGACGACGAGCTGTTCGCGCCCGAGGACGACGACGCGAGCGAGCACGAGCACCACGACGTGCTGGAGCCCTGGCACACCGGCGGCGACACGGCCGGCGCGGCGCACGTGCTGCCCGTGTTCCGCGCGGAGTTCCTGCACCTGCCCTTCGTGCGCGTCATGCCGGGCCAGCGCGCGCCCTCGCCGCCCGCCACGCCGCGCGCCTCGCCCGCGCCCTCGCCCGCCGACCCCGCGGCCGACAACCTGGCGCCCGAGCCCATGGAGCTGGAGCCGGCAGGCCGCGCGCTGGCCGTGCGCGACCCGGCCGGCGTGCTGCGGCGGCGGCGCCTGGCCGACTACGAGGACGAGTGCTACACGCGCGACGAGCCCAGCCTGAACCTCGTGGACGACACGCGCGACGCGCTGGCGCGCCGCTGCATCGCGCTCTCGAACATCCTGCGCGGTCTCACCTTCGTGCCCGGCAACGAGGCCGAGTTCAGCCGCTCGGGCGCCTTCCTGGCGCTCGCCGGCAAGCTGCTGCTGCTGCACCATGAACACGCGCCGCGCGCAGCTCGCGCCCGCGCCTACGAGCGAGCCGCCCGCGACGAGCACGACCAGGCGGCGTGTTGCTCGTCGCTGCGCGGCGGCGCCGAGTGGTGGTGGGACGCGCTGGCGCAGCTGCGCGAGGACGCGCTGGTGTGCTGCGCCAACATCGCGGGCGGCGTGGAGCTGGCGGGGCAGCCCGAAGCCGTGGCGCGGCCGCTGCTGGACGGCCTGCTGCACTGGTCCGTGTGCCCCGCCGCCGTGGCGGGTGACGCGCCTCCCGCGGCCGGCGCCGCCTCGCCCTTGTCGCCGCGGCGCCTGGCGCTGGAGGCACTTTGCAAGCTGTGCGTCACGGACGCCAACGTCGACCTGGTGCTGGCCACACCGCCGCGCGGGCGCATCGCGGCGCTGTGCGCGGGGCTGGCGCGCGACCTGTGCCGGCCCGAGCGGCCCGTGGTGCGCGAGTTCGCCGTGAACCTGCTGCACTACCTGGCGGGCGCGGGCGGTGCGGCGGCGCGCGAGGTGGCGCTGCACGCGCCGGCCGTGGCGCAGCTGGTGGCGTTCATCGAGCGCGCGGAGCAGACGGCGCTGGGCGTGGCCAACCAGCACGGCGTGGCGGCGCTGCGCGACAACCCGGACGCCATGGGCACGTCGCTGGACATGCTGCGGCGCGCGGCGGCGACGCTGCTGCGCCTGGCGGAGCACCCGGAGAACCGGCCGCTGATCAGGCGCCACGAGCGGCGCCTGCTGTCGCTGGTGATGTCGCAGATCCTGGACCAGAAGGTGGCGCACGAGCTGGCGGACGTGCTGTTCCACTGCAGCCAGGCGCGCGCGGACGACGAGTGTGTGTAG
Protein Sequence
MSVSLRQKSDSLGKLYEMDDAPERRGWVERLLAFMDERRTPIAACPTISKQPLDLYRLYLLVRERGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKSGKSNSTSSTAGSSNSQESFPSGGGGAGGAGGAAMDGYAPQYAGYPPQPNHSQGGGPGGDNLAASNPFDEPPGPRRPPGYQQGYGYEYGSPYQQNRPVYPPYGPDGDRGYRGGSVGSVGAVGGPGAGGEYQQYGAYAGAYRGAAPPAATPPPAQPYPDYYRAPHPQHPQHPHPPHAPHPQHPPHPQHPPHPPISPQQPPHEYGGGKALAGAPAVAGAPRRHPDFAKGEPAYGGAGAGAPAPGAGAAQAAPGAAARFGGAWGGQFQRAPAPPAPAAPWRPQPGAPQPPNWTHPPYSNTPSGGPPAWGGAPRPPTQDPYNSTAPSPGSAPIMTAPGQLKRELTFPAECVEAAVPTGEKRRRLAKADVAPVDAWRIMMALKSGLLAETCWALDILNILLFDDNCIGYFGLQHMPGLLDLLLEHFHKSLSDVFDSPSNEDGPWYAPPTSPEPVIKSAKTTREPREPPDPADRVRFLNGENYTLESRRRHPVMYKPDDELFAPEDDDASEHEHHDVLEPWHTGGDTAGAAHVLPVFRAEFLHLPFVRVMPGQRAPSPPATPRASPAPSPADPAADNLAPEPMELEPAGRALAVRDPAGVLRRRRLADYEDECYTRDEPSLNLVDDTRDALARRCIALSNILRGLTFVPGNEAEFSRSGAFLALAGKLLLLHHEHAPRAARARAYERAARDEHDQAACCSSLRGGAEWWWDALAQLREDALVCCANIAGGVELAGQPEAVARPLLDGLLHWSVCPAAVAGDAPPAAGAASPLSPRRLALEALCKLCVTDANVDLVLATPPRGRIAALCAGLARDLCRPERPVVREFAVNLLHYLAGAGGAAAREVALHAPAVAQLVAFIERAEQTALGVANQHGVAALRDNPDAMGTSLDMLRRAAATLLRLAEHPENRPLIRRHERRLLSLVMSQILDQKVAHELADVLFHCSQARADDECV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00039573; iTF_00041558;
80% Identity
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