Basic Information

Insect: Noctua janthina
Gene Symbol: -
Assembly: GCA_963576755.1
Location: OY755065.1:14928322-14941460[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.2 93 4.5 1.5 1 23 271 293 271 293 0.93

2 10 0.0014 0.11 13.7 7.8 1 23 300 323 300 323 0.97

3 10 1e-05 0.00083 20.3 2.3 1 23 354 377 354 377 0.98

4 10 0.079 6.3 8.1 0.1 2 23 386 408 385 408 0.96

5 10 0.15 12 7.3 0.0 2 20 419 437 419 439 0.92

6 10 2.3e-05 0.0018 19.3 1.1 3 23 449 469 449 469 0.99

7 10 0.00021 0.017 16.2 6.8 1 23 523 545 523 545 0.99

8 10 2.8e-05 0.0022 19.0 0.4 1 23 551 573 551 573 0.98

9 10 4.2e-06 0.00033 21.6 2.7 1 23 579 601 579 601 0.98

10 10 0.00055 0.044 14.9 2.4 1 23 607 630 607 630 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.2	93	4.5	1.5	1	23	271	293	271	293	0.93
2	10	0.0014	0.11	13.7	7.8	1	23	300	323	300	323	0.97
3	10	1e-05	0.00083	20.3	2.3	1	23	354	377	354	377	0.98
4	10	0.079	6.3	8.1	0.1	2	23	386	408	385	408	0.96
5	10	0.15	12	7.3	0.0	2	20	419	437	419	439	0.92
6	10	2.3e-05	0.0018	19.3	1.1	3	23	449	469	449	469	0.99
7	10	0.00021	0.017	16.2	6.8	1	23	523	545	523	545	0.99
8	10	2.8e-05	0.0022	19.0	0.4	1	23	551	573	551	573	0.98
9	10	4.2e-06	0.00033	21.6	2.7	1	23	579	601	579	601	0.98
10	10	0.00055	0.044	14.9	2.4	1	23	607	630	607	630	0.96

Sequence Information

Coding Sequence: ATGGATGAATTAAAGTATTGCCGAGTATGCCTTGAGACTGATGTAAAGATGTTCAGCTTGGAAACTAAGTCGAGCAATTCCATCGGTGTAGTTTACTCACATTTTGTGCAGATTCCGATATTTGATAGGAATCAACATGTGTGTTTTGAATGTGCCAATCTCCTCTATAAATATCATGAGTTCAAGTCAAAATGTCTCAGAGCTCACAACATTATATCTAGAATCAGACTTGATTCATTATCACAGATAACAAGGCAAACCCTCAAAAATGTAgataggaaaataaataaattggagtCTACCTTGAAAATATCTCCTGTAGTTGTTGTTTATGAAGAATGTAGAAATAACACAGAAACTGAATTTAATGTAATTGAACAGAAAGAAAGCAAAGAATCTGAAATCAATGTTAAAATTGAAGAAGAACATTACTTAGAAATAgagaattataataacattgaaGTAGAGAATAAATGTGATTATAATGAAGGATGTACAGAAAATTTCATTTATTCTCCGGGAGAGTCAGTCTCAGAAACAGTAGCACGGCCAAAAcagaaaagtaaaagtaaagaaCCAAAAACTAAAAAGAGGAAAGTAAAAAAGAGCGAGGGTGATGATGATTTCAGTGATGATGAACCATTATCGAAAAGTGCTACAAAGACAGTAATCACACAGCCAATAAGAAAAAAGAACGGTTTCAACTTTAGTTACTTTGATGACTATGCAACAGTTGTGTTTATGACCCCTGAAGATGCCAGAAAGGAAGTGCTATTAAGAAAAGAGTCCAGTAACTATAAAACATCACCATTCAAGTGTGATTTATGCTACAGgggatttgaattaaaaacaacATCTGAAAATCATGCTAAGAAACATAGCACTGAATATGGAGACTATGAATGTGATATCTGCCACATCAGGTTTCCTCAACAAGTGCACTTGTGTAAACATAGACTGTCATGTCATAAGAGAAAGTTTAGCTGTAAACTATGCTCATACATTTGTTATTGCACCGAACAAGCGAAATCTCATGTTAGTTTACATAAAGGAATGAAATATCCATGTAAACACTGTGGTGAAATATTCAGCATGTCAAATAGCCTACAGATGCATTACCGTACGAAGCATTTGAAGGAGTCTGTATGTGAAAGTGTTTGTGAGTTTTGTGGAGATATTTTTGGCACGCCGAAGGGACTGTTCTTACATAGAATGAAACTGCATAGGCAGGATAAAAACGACAATCTTGGTCCTGAGTGTAGCGAGTGCGGTGTACAGTTCACAACAGACCTGGCGTGGAAGCGACACCTGGTGCTTTCTACTAAACATAAAGTCAGTAACGGTTGCAAATTCTGCGGAGACACATTTTCAAACAAGGATGATCTTAAGACTCACATAAGAGTGCACTCACGGCAAAGCAACagatataataaaatcaaactacCCGCCGCATGTGCTATTTGCGACACATGGCTCCAAACCCGCGAGGAGTATAAGGCTCACGTGACGTCAGAGCACCCGCACAGCGACGAGGCGGAGAAGTTCCTCGCGGATGTCGATACACCTTATGTTTGCGAAGTTTGTGGACATATGTTTAAGAGGCAATGCTTCTTGAAATACCACCAGCGGAAACACACGGGCGAGCGTCCCTTCAAGTGCCTCGAATGCAACAAAACGTTCCGACTGGCCGGGGCGTTGACTATTCACAGCCGTATGCACAGTCGGACGAGGCCGCATAAGTGCGAGATGTGCGCGCGTATGTTTACGTACAAAAGTGCCCTTAATAAGCACATGAAGGTGCACCTCAACATCCGCCCTCACAAATGCGCACTCTGCGACAAAGGCTTCATCAACCTATGTGACTTAAAACTGCACATCAAATACGTACACGACAAGGTACCTTGGCctaagaagaagaacaagaagacTGTTATTGATGATGAAGACTACTAG
Protein Sequence: MDELKYCRVCLETDVKMFSLETKSSNSIGVVYSHFVQIPIFDRNQHVCFECANLLYKYHEFKSKCLRAHNIISRIRLDSLSQITRQTLKNVDRKINKLESTLKISPVVVVYEECRNNTETEFNVIEQKESKESEINVKIEEEHYLEIENYNNIEVENKCDYNEGCTENFIYSPGESVSETVARPKQKSKSKEPKTKKRKVKKSEGDDDFSDDEPLSKSATKTVITQPIRKKNGFNFSYFDDYATVVFMTPEDARKEVLLRKESSNYKTSPFKCDLCYRGFELKTTSENHAKKHSTEYGDYECDICHIRFPQQVHLCKHRLSCHKRKFSCKLCSYICYCTEQAKSHVSLHKGMKYPCKHCGEIFSMSNSLQMHYRTKHLKESVCESVCEFCGDIFGTPKGLFLHRMKLHRQDKNDNLGPECSECGVQFTTDLAWKRHLVLSTKHKVSNGCKFCGDTFSNKDDLKTHIRVHSRQSNRYNKIKLPAACAICDTWLQTREEYKAHVTSEHPHSDEAEKFLADVDTPYVCEVCGHMFKRQCFLKYHQRKHTGERPFKCLECNKTFRLAGALTIHSRMHSRTRPHKCEMCARMFTYKSALNKHMKVHLNIRPHKCALCDKGFINLCDLKLHIKYVHDKVPWPKKKNKKTVIDDEDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01532442;
90% Identity: iTF_01063172;
80% Identity: -