Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0013 5.1 7.7 0.0 9 23 34 49 32 50 0.93

2 7 0.0011 4.3 8.0 0.1 9 23 69 84 62 85 0.92

3 7 0.0011 4.3 8.0 0.1 9 23 104 119 97 120 0.92

4 7 0.0011 4.3 8.0 0.1 9 23 139 154 132 155 0.92

5 7 0.0011 4.3 8.0 0.1 9 23 174 189 167 190 0.92

6 7 0.00088 3.4 8.3 0.0 9 23 209 224 201 225 0.88

7 7 0.00088 3.4 8.3 0.0 9 23 244 259 236 260 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0013	5.1	7.7	0.0	9	23	34	49	32	50	0.93
2	7	0.0011	4.3	8.0	0.1	9	23	69	84	62	85	0.92
3	7	0.0011	4.3	8.0	0.1	9	23	104	119	97	120	0.92
4	7	0.0011	4.3	8.0	0.1	9	23	139	154	132	155	0.92
5	7	0.0011	4.3	8.0	0.1	9	23	174	189	167	190	0.92
6	7	0.00088	3.4	8.3	0.0	9	23	209	224	201	225	0.88
7	7	0.00088	3.4	8.3	0.0	9	23	244	259	236	260	0.88

Coding Sequence: ATGTATGAACGACCATACGCGGCCCAAATGTGGGACACGCCGAATAAAACAGATGTCAACTTGAATAAAGCCGAGAGGGTGAGAGTCGCGGCAGTGCCGACACCCGAGTGGCGCGAGGGTCGCAGTGTCGGCGCGGGAACGTTGTGTATAACGGAGGCGCTCATCGCAAACACACTACAGTACTGTACAGTCGCGGTAGTGCCGACACCCGAGTGGCGCGAGGGTCGCAGTGTCGGCGCGGGAACGTTGTGTATAACGGAGGCGCTCATCGCAAACACACTACAGTACTGTACAGTCGCGGTAGTGCCGACACCCGAGTGGCGCGAGGGTCGCAGTGTCGGCGCGGGAACGTTGTGTATAACGGAGGCGCTCATCGCAAACACACTACAGTACTGTACAGTCGCGGTAGTGCCGACACCCGAGTGGCGCGAGGGTCGCAGTGTCGGCGCGGGAACGTTGTGTATAACGGAGGCGCTCATCGCAAACACACTACAGTACTGTACAGTCGCGGTAGTGCCGACACCCGAGTGGCGCGAGGGTCGCAGTGTCGGCGCGGGAACGTTGTGTATAACGGAGGCGCTCATCGCAAACACACTACAGTACTGTACAGTCGCGGCAGTGCCGACACCCGAGTGGCGCGAGGGTCGCAGTGTCGGCGCGGGAACGTTGTGTATAACGGAGGCGCTCATCGCAAACACACTACAGTACTGTACAGTCGCGGCAGTGCCGACACCCGAGTGGCGCGAGGGTCGCAGTGTCGGCGCGGGAACGTTGTGTATAACGGAGGCGCTCATCGCAAAGCGCGCCTTAACTGTTTCTTATTCATAG
Protein Sequence: MYERPYAAQMWDTPNKTDVNLNKAERVRVAAVPTPEWREGRSVGAGTLCITEALIANTLQYCTVAVVPTPEWREGRSVGAGTLCITEALIANTLQYCTVAVVPTPEWREGRSVGAGTLCITEALIANTLQYCTVAVVPTPEWREGRSVGAGTLCITEALIANTLQYCTVAVVPTPEWREGRSVGAGTLCITEALIANTLQYCTVAAVPTPEWREGRSVGAGTLCITEALIANTLQYCTVAAVPTPEWREGRSVGAGTLCITEALIAKRALTVSYS*

Sequence clustering based on sequence similarity using MMseqs2