Basic Information

Insect: Noctua fimbriata
Gene Symbol: -
Assembly: GCA_905163415.1
Location: LR990950.1:10246316-10277235[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00048 0.044 15.2 2.8 1 23 502 524 502 524 0.99

2 7 0.066 6 8.5 1.1 1 23 542 565 542 565 0.91

3 7 0.0071 0.65 11.5 0.4 2 23 572 593 571 593 0.95

4 7 0.0002 0.018 16.4 0.1 2 19 601 618 601 620 0.95

5 7 0.00015 0.014 16.7 7.8 1 23 636 658 636 658 0.95

6 7 0.00033 0.03 15.7 8.5 1 23 682 704 682 704 0.95

7 7 3.3e-05 0.003 18.8 0.1 1 23 709 731 709 731 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00048	0.044	15.2	2.8	1	23	502	524	502	524	0.99
2	7	0.066	6	8.5	1.1	1	23	542	565	542	565	0.91
3	7	0.0071	0.65	11.5	0.4	2	23	572	593	571	593	0.95
4	7	0.0002	0.018	16.4	0.1	2	19	601	618	601	620	0.95
5	7	0.00015	0.014	16.7	7.8	1	23	636	658	636	658	0.95
6	7	0.00033	0.03	15.7	8.5	1	23	682	704	682	704	0.95
7	7	3.3e-05	0.003	18.8	0.1	1	23	709	731	709	731	0.98

Sequence Information

Coding Sequence: ATGGCACTGTGTGAAAGCCAGCTGGATTCCGCCTTGCCGCAGCTGAAACGTGACGAGTCTCCCAGCAGTGAGGGCAGTCAACAGACCCCGGAGAAGAAGCCTAAGATCGAACATAATGGGGAGATCTATGGACTGAATCAAGtgcCTGGCGGTCTTCCACTCGCTGTGGACTACCGCTCTCCTGTCTCACACTTCGTTCCCCCGGAGTTGTACGCGGCGAGGCAGAAGCAGCAGGAACCTATCACTACTGCTGAAACCAGCGACCCGCCGACTCCAGTAAAGCGAAAGCGAGGCCGGCCCAGAGTGGATAAGACTAGTCCGGAGTATCTGGCCAACTTGGCGGCTAGGAAACAGGCCAAGGAGATGGcCGCTATGATGAATAGCAGGACCCCAGAAAGTGGGGAAAAACGTAAGCGCGGCAGACCACGTGTGGACAAAACTAGCCCAGAGTATCTGGCTAGAAAGAGGGCTCGAGAGTTAGCCAAACCCATCTCAAAGACAGCCTTACAAATGTCATCGCGGGTCAAAAAACGACAGTTGCcagcaaacaataaaaaaatgggtgTTGCCATGAGGAAATTACCGGCGAAAATTGGCAACACTGTCCGAAAGGTTGGCGATAGGAAGGTTTTAGTGAGGCGAGCTGAAAACCGAAAGTTAATTAGGAGAAAAGATTCTGCTGCCTCGTCATCTGCCGGGGAGACAACGCCGCGGACCAAGCGGAAATATACCAAGAGGACGCCGAGCGCTAAGAAAGATGCTGGCCCTTCGACGGAGCGCGTGAAGGGCAAGCGAGGTAGGCCACGGAAGGTGGACCAGCTTGCAGCTAATAGCAAGCAACAACAGCCTAAGATTCGCGTAAGGAATAATTTGATGCCGGTCAACGCGGAGCCGATCACATTGGATAGCGATGATGAGCCGGATCTGGGTTCACCAAGTCAAGCATCAGACTCGTTGAGTTTGGACGAGAATCTGCGAGCGCTGAGACATATTCACGAGAAATACGCTAATATTGATAAGGACGATCTTTACGACACTCATTTGCTGGCCGCTAACTTCAAAAAGCCGCACGACTCGCAGCGAAGAGGTGACGACGACGAGGTCTTATCCGTCAGGAGCTCCGAAGGATGTGCTTCGGTTAAAGAGATGGAGACGAGGGTGGAGAAGCTGGAGGACAGCTCCAATTCCGACTCCGATAGCAGCAGCTCTGGATCTGGTAGTTCCAGCTCAGGTTCCAGCACATCATCGAGCTCCGATTCTTCAAGTTCATCAGATAGCTCGGACTCTGAGTCAGAATCTGGCGAAGAGATACCCAAGACTGAAGACCCGGCGCCCGCGGTCAACCATAATACTAACGAGGATGACAGGTCTTTCGGCGCATGGTCGTACAGTGGCCCGGCTTCCGACAGCGACGACTCGGACCCGGAACGGGCCGCGGACCCGGGAGCGTCGGTGTCGCACGACGAGATCAGCGAGTCGGAGAACGAGTCCGCTGACAAAAGCTTCCAATGCCACATCTGTTCTAAGTGGTATTCTACAAGGGTGACACTCAAAATCCATCGCCGCGTGCATCAGAACCGCGGCGGCGGTAACTCGCGGTCGCGCGCGCGCTCCTCCGACAGATACGAGTGTGACTGTTGCAGTGAAACATTCAACCGGCGGGAGAAATTATGGGAACACAAAGCGGAAGCGCACCGCGGCGCCATGACAGTTCGGTGCGAAGTTTGCCGCAAATGCTTCGAAGACGACGCGGAACTAGCTGCGCATGATCGCACTCACACCGCGGATGAACGAGCTGGGCGATGTCCCCAGTGCGGGCTCACGTTCCCGCGCTTCGACCAGTTGCGGCGCCACGCCGCATGTGCGCACGGTGCCGCGCCACCGGCCGGCTCCGCGCGCCTGCCGCACGCCTGCGCGCAATGCGGCAAGCGCTTCTCACACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGTTATAATACACAACCGAGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGAGCTTCTCGCACACGCACTCTCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGCATCATTCGCTCGAGCAGATCAACTGGCGCAGCATCTGAACAGTCACCTCGCAAACTACAAGCGCCTGAAGCCGTGA
Protein Sequence: MALCESQLDSALPQLKRDESPSSEGSQQTPEKKPKIEHNGEIYGLNQVPGGLPLAVDYRSPVSHFVPPELYAARQKQQEPITTAETSDPPTPVKRKRGRPRVDKTSPEYLANLAARKQAKEMAAMMNSRTPESGEKRKRGRPRVDKTSPEYLARKRARELAKPISKTALQMSSRVKKRQLPANNKKMGVAMRKLPAKIGNTVRKVGDRKVLVRRAENRKLIRRKDSAASSSAGETTPRTKRKYTKRTPSAKKDAGPSTERVKGKRGRPRKVDQLAANSKQQQPKIRVRNNLMPVNAEPITLDSDDEPDLGSPSQASDSLSLDENLRALRHIHEKYANIDKDDLYDTHLLAANFKKPHDSQRRGDDDEVLSVRSSEGCASVKEMETRVEKLEDSSNSDSDSSSSGSGSSSSGSSTSSSSDSSSSSDSSDSESESGEEIPKTEDPAPAVNHNTNEDDRSFGAWSYSGPASDSDDSDPERAADPGASVSHDEISESENESADKSFQCHICSKWYSTRVTLKIHRRVHQNRGGGNSRSRARSSDRYECDCCSETFNRREKLWEHKAEAHRGAMTVRCEVCRKCFEDDAELAAHDRTHTADERAGRCPQCGLTFPRFDQLRRHAACAHGAAPPAGSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSVIIHNRARLPHACAQCGKSFSHTHSLTRHMHNHAKQLYRCVVCKASFARADQLAQHLNSHLANYKRLKP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01440487;
90% Identity: -
80% Identity: -