Nfim017300.1
Basic Information
- Insect
- Noctua fimbriata
- Gene Symbol
- ct
- Assembly
- GCA_905163415.1
- Location
- LR990934.1:17706809-17741345[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.7e-27 5.5e-23 81.7 0.0 3 70 224 292 222 298 0.94 2 3 5.5e-32 6.4e-28 97.5 0.0 4 77 624 698 622 700 0.96 3 3 7.9e-31 9.2e-27 93.8 0.0 3 75 827 900 825 904 0.95
Sequence Information
- Coding Sequence
- ATGATCACGATTCATCGCTATGTTTATCCGAACGCCACCGACGTATCATGTCAAAAGTGCATGGACAAGTTCCATATCGCCCAACTAGTGGAAGACGTACGCCGTCTCCAAGCATCGCTAACAGCGCTTCAGGAAGCGCACGCTCAGCAGCTGCAGCGGCTAGAAGAACGGCTGGACGAGAAGAAGCAGCACATCGCCAGGCTTGAAGCGAGGCTCGATACTCAGCGGGACTATGATGATATCAAAAGAGAAATCAGCATGCTACGAGCACTCGACCTTGGCGGTGGAGAGCGATCTTTAGAGCGCAAGCCTGAAATTCGTTCGCCGAGCACCGCTCCTTCGCTCCGAGACCATTCGGCCGAACGAGAGCGAAGTGCCGAGCGCCGGGACCGGGATACAGGTGTGGAGGAGTGGCCCAGCACGCCGCCGCCGCTCAACAACAACACGACGCACCACAACAACAACGGCCCCACGCTGCCGCTGCCGCTACCGCCGCCGAGCCCCTTCCGCTTCGAAGAGCACCGCACCTACAGGTTCGCTGAAGACATGGGACCTCTGCCGCCCGGTGCTCTAGTCGGACGCCTTGGTGACTCCCTCATCCCCAAAGGCGACCCCATGGAGGCACGACTACAAGAGATGCTAAGATACAACATCGATAAATATGCGAATACGAACTTGGATACGTTGCATATAAGCCGGAGAGTGCGAGAGCTACTGTCGGTCCACAACATTGGACAGAGGCTGTTCGCTAAGTACGTGCTGGGCCTGTCCCAAGGGACGGTGTCGGAACTGCTATCGAAGCCGAAGCCCTGGGACAAGCTGACGGAGAAGGGGCGCGACTCGTACCGCAAGATGCACGCGTGGGCTTGCGACGAGGCTGCCATCATGCTGCTCAAGTCACTGATCCCTAAAAAAGTTGGGACGAAGGATGGCACCGGCGCAGTGTTCGGTCGGCCGGAGGGTGAGGGTGACGACAGGCTCACGCACGCAATCTTGAGTGAAGCGCATCTGATGAAGACGCCCGGTGGACCTCCCCACAACGATGACTCCAGAAGCAATGAGGACTCTAGCTCGCCGAGGACTCAGTGCCCTTCTCCTTTCTCCAATAAGGATGGGAGTCAAAACAGAAGACTCAAGAAGTACGAGAACGATGACATTCCTCAAGAGAAGGTGGCGCGCATATACCAGGAGGAGCTTGCCAAAATCATGACCAGGAGAGTAGAGGACATCCGCCGCGAAGGTTTTCCTGGCATGTTTCCTCCTTTTTTCAGCGGCGGCATGCCACCACACATGGAGAGGCCACCGGAAGACATCCGCATGGCCCTGGAAGCGTACCACAGAGAACTTGCCAAGATCCAGCCGGGTGGCAACATTCCCAACCTTCACAACTTGCCAGCCATGCCGCCCTTTCCGAACCTCCTCGCCTTGCAGCAGCAGGCGATGCAACAAGCACAGAACCAACAGATGAACGGCTCAGGAGCGGTCCAAGATCTCTCTTTGCCTAAAGATAAACACGCCAAAATAAATGGAATGACTGATAGTGATAAGGATAGATCAATGGATGCCGAAGAGGCTATAAGGCACGCCGGGAGCGCATTCTCATTAGTAAGACCAAAACTAGAGCCGGGACAGCAATCACAAACTGGATCGTCCGCGTCCAGTCCACTGGGGAACGCGATACTACCGCCTGCAATCACTCCGAATGAGGATTTCAGTAATTCAGCGGCAGCAAGCCCACTGCAGAGGATGGCTTCGATCACGAACAGTCTGATTTCCCAGCCGTCAAACCCTCCTCATCATCCACCCGTACAGAGGTCGATGAAAGCAGTTCTTCCACCAATCACACAGCAACAATTTGATCTCTTTAACAATTTGAACACAGAAGATATAGTAAGGAGAGTGAAAGAGGCTCTGAGTCAGTACTCCATTAGCCAAAGACTGTTCGGAGAATCCGTCCTTGGTCTATCACAAGGATCCGTGAGTGACTTGCTAGCGAGACCGAAGCCCTGGCACATGCTGACGCAGAAGGGACGAGAGCCTTTCATTCGCATGAAGATGTTCTTGGAGGATGACAATGCAGTACACAAGCTGGTTGCATCACAGTACAAAATCGCGCCGGAAAAACTAATGAGGACTGGAAACTACAGCGGAGCACCTCCATGTCCGCCAAATATGAACAAACCCATGCCGCCAACACAGAAAATGATTTCCGACGCGACCTCCTTGCTGAGCAAGATGCAGCAGGAGCAGCTCCTGGGCGCGGGTCACCTGGGTCACCTGGGGCAGCCCACGCCGCTGCTCCTCACGCCGCCCGGCTTCCCGCCGCACCACGCCGTCACGCTGCCGCCGCAGCACTACGACAACAACAACAAGGAGCGCAAGCCCCCGCCGCCCCCCCAGCCACACCACCAGCCCCCCATCATGCGCAGCCTGCACCAGCACATATCGCCGAGCGTCTATGAGATGGCGGCGCTCACTCAAGACCTAGACACGCAAACGATCACGACCAAAATTAAGGAAGCGCTACTGGCAAACAACATTGGCCAGAAAATCTTTGGCGAAGCTGTTCTAGGTCTATCACAGGGTTCCGTCAGTGAATTACTGTCAAAACCAAAACCCTGGCATATGCTCAGCATCAAGGGTAGGGAACCTTTCATTCGCATGCAGCTGTGGTTAAGCGATGCCCACAATATCGACCGCCTACAGGCTTTGAAGAATGAGCGACGGGAAGCGAGTAAACGACGACGATCAAGCGGCCCCGGACAAGACAACTCGTCCGACACATCGTCGAATGATACGTCAGAGTTCTACCACTCGAGCTCGCCGGGCCCCACAGCCGGAGCGCCGTGTGCCAAGAAACAACGAGTACTATTCTCCGAAGAGCAGAAAGAGGCACTCAGATTAGCATTCGCACTCGACCCCTACCCAAACATGCCAACGATCGAATTCCTAGCCGCAGAATTGGGTCTGTCCTCGCGAACCATCACCAACTGGTTCCACAACCACCGCATGCGGCTAAAACAACAAGCGCCTCATGGCTTGCCCGCCGAACCTCCCGCGCGGGATCAGTCCTCGGCGCCCTTCGACCCAGTCCAGTTTCGTCTTCTCCTCAATCAGAGACTACTGGAACTTCAGAAAGAGAGGATGGGTCTCGCTGGCGTACCCCTGCCCTACCCGCCTTATTTCGCGGCCAACTCCAACCTAGCAGCGCTGATTGGTCGCGGGCTAATACCCCCCGAAGACCAGGTGAAGGACCAGTCCGGCGGCCTCGACCTTTCGATGCCGCTGAAACGAGAACCCGATGGTGATGACTTCGAGGACGATGACGTCGAGAGCAACCTCGGCTCCGAGGACTCGTTGGACGAGGAATCTAAGACTGAGCCGAAGGCGGCATCGACGCCGCACGCTACAGGTCGATCCAGTAGACGAAAGCCTGCAGCGCCGCAGTGGGTTAACCCTGACTGGCAGGATGAGAAACCGCGTAACCCCGACGAAGTGATAATTAATGGAGTATGTGTGATGAGAAGCGATGACTTCCGGAGAGAGGCGGAGGAGACGGTGCGCGTGGAGCCGTCGCCGGTGGCGCGCGAGGGctcgccggccgcgtcgcccgCGCCGCGCACGCCGCACACGCCGCACACGCCGCACACACCGCACACGCCGCACACGCCGCGCCCGCCACACACACCTGAAGACGTGATCCCTGAAGACAAAATCAAATCCGAGACCGACGACGGCTGGGAGTACTAA
- Protein Sequence
- MITIHRYVYPNATDVSCQKCMDKFHIAQLVEDVRRLQASLTALQEAHAQQLQRLEERLDEKKQHIARLEARLDTQRDYDDIKREISMLRALDLGGGERSLERKPEIRSPSTAPSLRDHSAERERSAERRDRDTGVEEWPSTPPPLNNNTTHHNNNGPTLPLPLPPPSPFRFEEHRTYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNIDKYANTNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAIMLLKSLIPKKVGTKDGTGAVFGRPEGEGDDRLTHAILSEAHLMKTPGGPPHNDDSRSNEDSSSPRTQCPSPFSNKDGSQNRRLKKYENDDIPQEKVARIYQEELAKIMTRRVEDIRREGFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHNLPAMPPFPNLLALQQQAMQQAQNQQMNGSGAVQDLSLPKDKHAKINGMTDSDKDRSMDAEEAIRHAGSAFSLVRPKLEPGQQSQTGSSASSPLGNAILPPAITPNEDFSNSAAASPLQRMASITNSLISQPSNPPHHPPVQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNKPMPPTQKMISDATSLLSKMQQEQLLGAGHLGHLGQPTPLLLTPPGFPPHHAVTLPPQHYDNNNKERKPPPPPQPHHQPPIMRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREASKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTAGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSSRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLIPPEDQVKDQSGGLDLSMPLKREPDGDDFEDDDVESNLGSEDSLDEESKTEPKAASTPHATGRSSRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRREAEETVRVEPSPVAREGSPAASPAPRTPHTPHTPHTPHTPHTPRPPHTPEDVIPEDKIKSETDDGWEY*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01338275;
- 90% Identity
- iTF_00445005;
- 80% Identity
- iTF_01062693;