Nfim029721.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Noctua fimbriata
Gene Symbol
arid5b
Assembly
GCA_905163415.1
Location
LR990949.1:11213886-11227849[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-14 6.4e-11 43.4 0.1 4 89 238 310 235 310 0.90

Sequence Information

Coding Sequence
ATGGAGAAGGGTGCGCATTTTGGGGAACAATCTTGTGACGAAGTCTTAGCCATCAACGACAAGGTAGTCCTCCGCGCCGATGACCTGCTGTCGTGGATGTGCGTGGGCACTGAGTGGCGCTGGGGCCTCCGGGCGGTGTGGCGCGGCGCCTGCGCTCCCCCCGCCGACCTGCCCCGGCACGCGCCGCTCACACACACCAAGCTGGACTTCAGTGATGTAGATTCCGAGAAAAGTGCTATTGTGGTGGACGCAGACGCGCCAGGCGTGGTGGTCTTCTCATACCCTCGTTACTGCCGCTACAGGGCGCTCATAGCCAGGCTTGAAGGCATCCAGGCTTCCTGGCTAAGAGACTCCCTGGTCGCAGCCCTAGGAGGGTACGCGGCGCCGACTAGTAACACCAGGATACTATACTGCAAGGACACATTCGAGTACCCCGAGCTAGAAGGCCACGAGTTCGTCTGCAACCACCTCGCCCCGCGGCTGAAGGGCAGGCCGCGCGGGCGCCGGCGTCGCGCGCACTCGCCGGACCTCTCGCACACACACGACGAGCCCGGCTCCGACCGGTCAGACTCGGACGACCCGCCTGCTTCAGGACCCGCTAGCAGTGACCCGCCGACCCCCCGGCGCCTGTCCCTCCGCAACGGCGCGCCCCCCCCCAGCGACGAGGACGACGAGGAGTACCGGCGAGTGGAGCAGTCCCCGGAGGACCGCGTCTTCCTGCAGCAGCTCAAGATGTTCTACAAGAGTAGGAGCGAGCCCTTCAAGAGCGGACACACGCTCAAGCATTTGTCGCTGCGCGCGCTGTACCTGGCGGTGGTGTCGCGCGGCGGGTACGAGGCGGTGTGCCGCCACAAGCTGTGGCGCGCGCTGGCGCGGGACCAGCCCGCCAGGACACGGAGGCACTACGAGAGATTCCTCTTGCCCTTCGAGAACCACGAGCGACGCAACGGCACCTCCCTCTCCTTCAAACTTAATGGGAAACTGGACGCGGAACCGCGCACCATCGCCACCATCGATGTCACGGACTCCCCACGAAGAGACGAAGACGACAAAATCCTCCGCACCCCCTCTCCTACCCCCAAACTCGACAATTACGACAAACTCGGAAACCCGGATATCGACAGCGAAACGGGAGAAATCACCACCAAAGATGATATAATAATCAAAAATGCTGAAGAACTAAATAGGGAATTCTTGGACTCGCTGCCCAAAGAGGAGAAGATGGTCAAGATATCCGTGAAGCCGGTTGAGAAGCTGATCGAGCCGGCTCGCGTTGAGGGTGTGGCGAAGGTGGAGGGGCAGATAGACGAGAGGGACTTTAGTCAGAATTATTTGGGGGATTTACAGAAATTTAGCATGGGAGCGGAGTCACTCTCGTCTCGTGCGACGCCTCTCAATGGTCACGCTGCGCCTGCGCCCACAGACCTTAAGACGTCCCGTCCCGCCGGGCGCAGCTCGCTGCGCGCCGTGCGCGTGAAGCCGGCGCGTGCGCAGCTCACGCCGGCCAGCACACCGCCCGGGCCGGGGCAGATGGTGCAGGGTGGGCAGACGGGGCAGACTGGGCAGACGGCGCCGGTGTCTCCGCCGGTGACAAACTTCGGCATCCACCGCCCGCCGCCGCACAACGCGCACATAGACGACGACATCATGGAGGTCCCCTACAAGCCGAAAAGCCCAGAAATCATCGATCTAGACGAATACCCAGAGAGTCCTCAGGcagtaaagaagaagaagctagACATACTGAAGGAACGAGGACTGGAGGTGACAGCTCTACCACCCCCCTGGCAGGGAGTCGGCCCCATGATGGCCCCGCCGATGATCCTCAACCCCGCAGTACAGCATCAGATCATGACCCAAGCACAGCTGTTCCAGATGTACAACATCATACCACCCAACTATGCCAATGGGATCCAGCCTCCTAAGGTCATCCAGGCATCTTCTATCTTCGGTAACACGGGGCCTGAGAAGACTGTCTATGGGAACCCCAAAGACCCCTTCATGCCACCCCCTCATGTTCTGCACGGGGTGCCAGTGAAGCCGTTAAAAACTGCTCCCCCTCCGCCCATTCCTCAGGATATACTAGACCTTACCTGCAAGTCCTCTAGCCCTCCTCCTCAGAAACCTGCCGTGGAGATAGTAAGAGTACCTCCCTCTCAATCTCCAACTGCGCAGAACTTGACAAAGAATTACACTTTAGTCGATGGCAAAGCTGTTGTGGGCTCGAATTTAGAAATAACCTTAGTCAACAAAGCGCAGAGTCCTGGCAAGAATAGACCTCCACAGAAGAGGTCCAGCAACGGAAAGTTCATGTCAGCGAAGACTGGTACACCGCCCAAGGAGTCCTACCCCAAGTACACCTCGCCTGGCCCAGCCCCTCAAAAGAAACCTCCTATCAACATCCCCAGCTATCAGATCAGGGAAGACTCCTCTCCCACCCAGAGTCAAGTACTACAAAACGCAATGAAGAACCAGAACTTAGCTCAAATAATGGATTTGCAGAAGAACTCTGTTCCAATGACGTCTTTCATGGATCCTTACGTCGCTCTATACAGCAGTTTAGCGGGCCAAATGGACCAGAGGCAGCTGGCCATGTACCGGGACCTCATGACCAATCAGTTCAGATACCCAGGGCTGTTGAACCTGGGGGTCGCCACACCGACAACGAAGAATTAG
Protein Sequence
MEKGAHFGEQSCDEVLAINDKVVLRADDLLSWMCVGTEWRWGLRAVWRGACAPPADLPRHAPLTHTKLDFSDVDSEKSAIVVDADAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTSNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAHSPDLSHTHDEPGSDRSDSDDPPASGPASSDPPTPRRLSLRNGAPPPSDEDDEEYRRVEQSPEDRVFLQQLKMFYKSRSEPFKSGHTLKHLSLRALYLAVVSRGGYEAVCRHKLWRALARDQPARTRRHYERFLLPFENHERRNGTSLSFKLNGKLDAEPRTIATIDVTDSPRRDEDDKILRTPSPTPKLDNYDKLGNPDIDSETGEITTKDDIIIKNAEELNREFLDSLPKEEKMVKISVKPVEKLIEPARVEGVAKVEGQIDERDFSQNYLGDLQKFSMGAESLSSRATPLNGHAAPAPTDLKTSRPAGRSSLRAVRVKPARAQLTPASTPPGPGQMVQGGQTGQTGQTAPVSPPVTNFGIHRPPPHNAHIDDDIMEVPYKPKSPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPPPWQGVGPMMAPPMILNPAVQHQIMTQAQLFQMYNIIPPNYANGIQPPKVIQASSIFGNTGPEKTVYGNPKDPFMPPPHVLHGVPVKPLKTAPPPPIPQDILDLTCKSSSPPPQKPAVEIVRVPPSQSPTAQNLTKNYTLVDGKAVVGSNLEITLVNKAQSPGKNRPPQKRSSNGKFMSAKTGTPPKESYPKYTSPGPAPQKKPPINIPSYQIREDSSPTQSQVLQNAMKNQNLAQIMDLQKNSVPMTSFMDPYVALYSSLAGQMDQRQLAMYRDLMTNQFRYPGLLNLGVATPTTKN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00374957;
90% Identity
iTF_00711598;
80% Identity
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