Basic Information

Insect: Noctua comes
Gene Symbol: -
Assembly: GCA_963082995.1
Location: OY720276.1:3471788-3487394[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.3 96 4.4 1.5 1 23 272 294 272 294 0.93

2 10 0.0015 0.11 13.6 7.8 1 23 347 370 347 370 0.97

3 10 1.1e-05 0.00086 20.2 2.3 1 23 401 424 401 424 0.98

4 10 0.086 6.5 8.0 0.1 2 23 433 455 432 455 0.96

5 10 0.043 3.3 9.0 0.0 2 20 466 484 466 486 0.94

6 10 2.5e-05 0.0019 19.2 1.1 3 23 496 516 496 516 0.99

7 10 0.00023 0.018 16.1 6.8 1 23 570 592 570 592 0.99

8 10 3.1e-05 0.0023 18.9 0.4 1 23 598 620 598 620 0.98

9 10 4.6e-06 0.00035 21.5 2.7 1 23 626 648 626 648 0.98

10 10 0.0006 0.046 14.8 2.4 1 23 654 677 654 677 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.3	96	4.4	1.5	1	23	272	294	272	294	0.93
2	10	0.0015	0.11	13.6	7.8	1	23	347	370	347	370	0.97
3	10	1.1e-05	0.00086	20.2	2.3	1	23	401	424	401	424	0.98
4	10	0.086	6.5	8.0	0.1	2	23	433	455	432	455	0.96
5	10	0.043	3.3	9.0	0.0	2	20	466	484	466	486	0.94
6	10	2.5e-05	0.0019	19.2	1.1	3	23	496	516	496	516	0.99
7	10	0.00023	0.018	16.1	6.8	1	23	570	592	570	592	0.99
8	10	3.1e-05	0.0023	18.9	0.4	1	23	598	620	598	620	0.98
9	10	4.6e-06	0.00035	21.5	2.7	1	23	626	648	626	648	0.98
10	10	0.0006	0.046	14.8	2.4	1	23	654	677	654	677	0.96

Sequence Information

Coding Sequence: ATGGATGAATTAAAGTATTGCCGAGTATGCCTTGAGACTGATGTAAAGATGTTCAGCTTGGAAACAAAGTCGAGCGATTCCATCGGTGTAGTTTACTCACATTTGGCGCAGATTCCGATATTTGATAGGAATCAACATGTGTGTTTTGAATGTGCCAATCTCCTCTATAAATATCATGAGTTCAAGTCAAAATGTCTCAGAGCTCACAACATTTTATCTAGAATCAGACTTGATTCATCATCACAGATAACAAGGCAAACCCTCAAAAATATAGATAggagaataaataaattggaatcTACCTTGAAAATATCTCCTGTAGTTGTTGTTTATGAGGAATGTACAAATAACACAGAAACtgaatttaatataattgaaCAGAAAGAAAGTAAAGAATCTGAAATCAATGTTAAAATTGAAGAAGAACATTACTTAGAAATAGAgaattataataacattgaaattgaaaataaatgtgATTATAATGAAGGATGTACTGAAAATTACATTGATTCTATGGGAGAGTCAGTCTCGGAAACAGTAGCACGGCCAAAACAGAAAAGTAAACGTAATAAAGAACCAAAAACTAAAAAGAGGAAACTTAAAAAGAGCGAGGGTGATGATGATTTCAGTGATGATGAACCATTATCGAAAAGTGCTACAAAGACAGTAATCACACAGCCCGTAAGGAAAAAGAACGGTTTCAACTTTAGTTACTTTGATGACTATGCAACAGTTGTGTTTATGACCCCTGAAGATGCCAAAAAGGAAGTGCTGTTAAGAAAAGAGTCCAGTAACTACAAAACATCGCCATTCAAGTGTGATTTATGCTACAGGGgatttgaattaaaaacaacatcTGAAAATCATGCTAAGAAACATAGCACTATGCCCAGTAGCCTCCTCAAGGCGCTGATCGGCGGGCCCAACCACCATATCATTAGCGCAGCCAATATTGTTCACCATCTGACCATCTATAGAACAGCCTACCCTGGCGCTGATGAGCTCACGGACGAGCCCCCTTACGAATATGGAGATTATGAATGTGATATCTGCCACATCAGGTTTCCTCAACAAGTGCACTTGTGTAAACACAGACTGTCATGTCATAAGAGAAAGTTTAGCTGTAAACTATGCTCCTACATTTGTTATTGCACTGAACAAGCGAAATCTCATGTTAGTTTACATAAAGGAATGAAATATCCATGTAAACACTGTGGAGAAATATTCAGCATGTCAAATAGCCTACAGATGCATTACCGTACGAAGCATTTGAAGGAGTCAGTATGTGAAAGTGTTTGTGAGTTTTGTGGAGATATTTTTGGCACGCCGAAGGGACTGTTCTTACATAGAATGAAACTGCATAGGCAGGATAAAAACGACAAACTTGGTCCCGAGTGTAGCGAGTGCGGTGTACAGTTCACAACAGAACTGGCGTGGAAGCGACACCTGGTGCTTTCTACTAAACATAAAGTCAGTAACGGTTGCAAATTCTGCGGAGACACGTTTTCAAACAAGGATGATCTTAAGACTCACATAAGAGTGCACTCACGGCAAAGCAACagatataataaaatcaaactaCCCACCGCATGTGCTATTTGCGACACATGGATCCAAACCCGCGAGGAGTATAAGGCTCACGTGACGTCAGAGCACCCGCACAGCGACGAGGCGGAGAAGTTCCTCGCGGATGTCGATACACCGTATGTTTGTGAAGTTTGTGGACATATGTTTAAGAGGCAATGCTTCTTAAAATACCACCAGCGGAAACACACGGGCGAGCGTCCCTTCAAGTGCCTCGAGTGCAACAAAACGTTCCGACTGGCTGGGGCGTTGACTATTCACAGCCGTATGCACAGTCGGACGAGGCCCCATAAGTGCGAGATGTGCGCGCGTATGTTTACGTACAAAAGTGCCCTTAATAAGCACATGAAGGTACACCTCAACATCCGCCCCCACAAATGCGCGCTCTGCGACAAAGGCTTCATCAACCTGTGTGACTTAAAGCTGCACATCAAATACGTACACGACAAGGTACCTTGgcctaagaagaagaacaagaagaccGTTATTGATGATGAAGATTACTAG
Protein Sequence: MDELKYCRVCLETDVKMFSLETKSSDSIGVVYSHLAQIPIFDRNQHVCFECANLLYKYHEFKSKCLRAHNILSRIRLDSSSQITRQTLKNIDRRINKLESTLKISPVVVVYEECTNNTETEFNIIEQKESKESEINVKIEEEHYLEIENYNNIEIENKCDYNEGCTENYIDSMGESVSETVARPKQKSKRNKEPKTKKRKLKKSEGDDDFSDDEPLSKSATKTVITQPVRKKNGFNFSYFDDYATVVFMTPEDAKKEVLLRKESSNYKTSPFKCDLCYRGFELKTTSENHAKKHSTMPSSLLKALIGGPNHHIISAANIVHHLTIYRTAYPGADELTDEPPYEYGDYECDICHIRFPQQVHLCKHRLSCHKRKFSCKLCSYICYCTEQAKSHVSLHKGMKYPCKHCGEIFSMSNSLQMHYRTKHLKESVCESVCEFCGDIFGTPKGLFLHRMKLHRQDKNDKLGPECSECGVQFTTELAWKRHLVLSTKHKVSNGCKFCGDTFSNKDDLKTHIRVHSRQSNRYNKIKLPTACAICDTWIQTREEYKAHVTSEHPHSDEAEKFLADVDTPYVCEVCGHMFKRQCFLKYHQRKHTGERPFKCLECNKTFRLAGALTIHSRMHSRTRPHKCEMCARMFTYKSALNKHMKVHLNIRPHKCALCDKGFINLCDLKLHIKYVHDKVPWPKKKNKKTVIDDEDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01532442;
90% Identity: iTF_01063172;
80% Identity: -