Nfla009189.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nineta flava
Gene Symbol
ift122
Assembly
GCA_963920215.1
Location
OY986041.1:126268895-126297420[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 2.8 1e+02 4.2 2.1 1 20 1356 1375 1356 1379 0.84
2 13 0.0017 0.065 14.3 0.2 1 20 1383 1402 1383 1404 0.94
3 13 0.0002 0.0073 17.2 1.0 1 23 1423 1445 1423 1445 0.99
4 13 0.0013 0.047 14.7 0.6 1 23 1450 1472 1450 1472 0.97
5 13 3.6 1.3e+02 3.8 0.5 3 23 1494 1516 1492 1516 0.89
6 13 0.26 9.7 7.4 0.2 1 23 1592 1616 1592 1617 0.93
7 13 0.03 1.1 10.4 5.4 1 23 1915 1938 1915 1938 0.97
8 13 0.007 0.26 12.4 4.9 2 20 1971 1989 1970 1992 0.92
9 13 0.32 12 7.1 0.6 3 23 2000 2020 1998 2020 0.96
10 13 0.0007 0.026 15.5 1.2 1 23 2026 2048 2026 2048 0.97
11 13 0.00018 0.0068 17.3 5.7 1 23 2054 2076 2054 2076 0.99
12 13 0.041 1.5 9.9 2.3 1 23 2082 2104 2082 2104 0.95
13 13 0.0026 0.098 13.7 2.1 1 23 2110 2133 2110 2133 0.97

Sequence Information

Coding Sequence
atgaGAACAATACCAAAATGGGCAGATAAAATACAAGATGCCGATAAAAATGTTCAATgcgTTTACGATTTATGTTTCCATCCAAAAGGGAATTTAATTGTAGCCGCCGGGCTACAAGTTTTAATATACTCCACAGAGGATGGATCATTACTTCATGCTTTAAAAGGTCACAAAGATATTGTCTATTGTGTATGCTGTACTAAAGATGGGAAAAAATTGGCCTCGGGTAGTGCTGACAAAACAGTGATTATATGGAATTCAAAATATgaaggaattttaaaatattcCCACAATGATGCTGTCCAATGTTTAGCATATAATCCAACATCCAGTCTATTAGCTTCATGTGCCATCTCTGATTTTGCCCTATGGTCACAAGAGCAAAAAtctgtacaaaaatttaaaattaatgctCGAATTAATGCGTGTTCTTGGACAAATGATGGCCAATATTTAGCTCTAGGATTAGGCAATGGATCTGTATCAATTAGAAATACAttaggTGAGGAAAAAGGTCGTATTGATCGACCTGGTGGCACGGAGGCTGCCATATGGTCATTACAATGGAGTCCACATAAAGATGATGGTGATATACTATGCATAaccgattggaataaaaatatAGCATTTTATACACTTAGTGGAAAATTAGTGGGTCGAGAAAGAGGTTTAGATTTTGATCCATTATGTGTATCATATTTTCCTGGTGGAGAATACATTCTAGTTGCTGGTACAAATAAAGCATGTACATTAATGACAAAAGATGGCATTAAATTGGGGAATGTTGGCGATGTACAAAATCATTGGATTTGGTGTTGTGCAGCTCATCCatcatcaaattttgtgGTAATTGGATGTCAAGATGGTACTTTAGCATACTATCAATTAGTATTTAGTACCGTACATGGATTGTATCAAGAACGATATGCATTTCGTGAAAATATGACCGATGTTATTATTCAACATTTAATTACAGATCAAAAAGTACGAATTAAATGTCGGGATCTAATTAAGAAAATTGCTATTTACAAGGATCGTTTAGCgGTTCAATTACCAGAACGTATCGTGATTTATGAATTAAATGCTACGGAACCAGATAGTATGCATTATAGAGTGCGAGAAAAGATTAGTCAGAGTTTAGACTGTAGCTTACTGGTTGTATGCTCTGAGCATTTAGTTGTATGTCAAGAACGACGTCTTCTTGGTCTAATGTTTTCTGGTGAACGATACAGGGAATGGATGATGGATAGCCCAATACGTTACATAAAAGTAGCTGGTGGTCCACCAGGCAAAGAAGGTTTAATTTTAGGTTTAAAAAATGGTCAGatttggaaaatttatttaaatgatccAATGCCCATACTAATTCTAACTATATCAGCGCCAGTACGATGTTTGGATTTAAATTGTATGCGAAATAAAATTGCTGTTGTTGATGACAATTGGTTGTGTCAAGTATTTGTTATGGAAACAGCAGAGCTCCTCTTTACTgAACATGATACAAATAGTGTTGCTTGGAACACGAAACATGAAGATTTGTTAAGTTTTTCTGGTGACAAATCATTAGGTTTAAGATTAGTCAATTTTCCAGCACATCGTCGCTGTCAACAGGGTTTAGTGGTTGGATTTGTTGGTAATAAAGCATTTTGTTTACAAGGTAATATTATAACAAGTGTTCAGTTACCTGTATCGGCGGCGATGTATCAATGTATCGATAAAAAGATGTTTATTGAGGCATATAAAATTGCTCATTTAGGTGTTACTCAAACTGATTGGGAAGAATTGGGTTCAGTGGCTTTAGAACAATTACAGTTAGATGTTGCACAAAAATCATATATGTATTTGCAAGACATTCAtcatttgaatttaattaacgATTTACAAGAACAACAACGTAAAGGAGAAAATAATCAGGAACTTTTAAAAGCTCAAGTATTATCATTTCGTGGTCGATTTAAAGAATCAGCTCGACTATATCAACGATCTGGTCATGCGCATAGAGCCGTTacaatgtatacaaatttaagaATGTTTGATTTGGCTCAGgatTATATAGGTGTAGATAGTAATActgataataaaagtttaatacgTCAAAAAGCTGAATGGGCAAAGAATATTAATGAACCAAAAGCAGCAGCTGAAATGTATCTATCAATTGGGGATACACGTAAGGCGATTGAAATTATGGCTGAACATAATTGGATTGAAATGTTGGAAGATATTGGTCGTCGTCTTGATAAAGCCGATCGAGCTAATTTAATATTAGTTGCTGAACATTTACGACGTTTAGGTGAAACAACTGCTGCCGGAGACTTATATCGTCGTTTAGGTGATGATAGTGCTTTATTAACGTTATACGTTGAGGCACATCAATGGCCACAAGCTTTTGCATTGGCTGAACGACAACCAGAACATAAGCATTTAGTTTACGTGCCATATGCTCAGTGGTTAGTTGAAAATGATAAGTTTCATGAAGCACAAACAGcATTCCATAAAGCGGGTCAACCGGATGAAGCGTTTAAAGTATTGAATCGTTTAATTGAGAATGCATTAAATGAGAAACGTTACAATGATGCCGGATACTTGCATTGGATACTAGCACGACAATGTTTAGAGTTGGCTGAAATGAATgagaatcataaaaataataatatcaataaatttcatGAGAATCAACGAATGGCTGCCATATATTATGCATACAATACATTACATCAATACATTGAACAACCGTTTACGTCATACATACCGGAGGCACTTTTTAATATTGCACGATTTGTtatgaatgaaattaaaaattttaaaccgaAAGGCATCTCAGAATTtACAATATTATATTCGTTATCAAAACAAGCGAGAATATTGGGTGCTCATAAATTATGTCGACAATTATTAGATAAATTACGTTTGTTACGTATACCAAATCGATTTCAGGAACAAGTTGAAATTGCAACATTAACAGCATACACCAAAGCACACAATGATCCGGAAGATCTTTTACCGATGTGTTATCGTTGTTCCACATACAATCCATTAATTGGGGAAGCGAATAATATTTGTTCACATTGTCATCAACCATTTGAACATTCGTTTGTGTCGTTTGAAGTGCTACCATTGGTTGAATTTTATTTGGAATCGGATATCAGTGATGATGAAGCTGTACGATTAATACAAGCACCGATTGAGGATCATAACAATCCATCAATAGAACGGGATATTGACGAAACGCTGAATACATTAGAAATTGATAATGGTATTGTAGTACAGGATTTATTTACAGcgaaattaactaaattagaaGATGAAAATGATGGATTTGTTCCAATTAAAGTGAACAGATCCACATTACAATCAATGGATCCAGCAACAGTGATTATATGTAAATGGCCGAGTCCACTTCGTTATCAATTTTATCGCAATTTACTTCCCGATTTACAAATCAGTTTTTGTCATTCATGTTTTAAAACATTCCACGTAGATGATTATGAATTACAAGTGTTGCAAAAAGGACATTGCCCATTTTGTAGGGCTTCAGCCGAGatgttggttaaaaaagaattaaaatcatTTGTTATACCGAAAATTGAGGAAAATTACTATTCAAAATGTTACATATGCAATCAAAATGTGACCACATCAACCGGTGTCGAATTACTAAAAGCAAATTTACTGAGTTCGAATGGATCAATACCtcaaaaaattgctaaaattatgGGTAATGATTGTATGGTCCTAGTTTCGGAAGATGATTGTATTTGCtctaaatgtataaatttattgaatcgtTTAGATCATTTAGAAATCGAAATCACCAAAATTTTAGatgaaattacaaattatttaaatattaaatataatattactagTAATAATAGCATTCCAATACCCGCTCAAAACAAACGGGGTACTAAACGAAAATATCCGGataatgatttatttgaaaatcaaccagaaattgaaaaacaattatcGGAAATGTTTGGATCGCCTGTCACTGTAACCCCagcaaatcaattaaaaactatttcaccCAAATTGAAAAACGTTAAAAATACGTTCTTATTTAAATGTCCGTTATGTCGTCAAGGTTTTAACGATAAAACACGCTTACATTTTCATATAACTGATagtcatttatcaaaatatcgTTGTCACATTTGCCAGATTACATTTAAAGATGGCGATTTACTTGAAAAACATGTtgcgaaaaataattgtacGAAAACCAACAACACCACCTTATTATcacttgataataaaaaatttaaatgtgcaATATGCTCGCAAAAATTCGAAACAAAAGAACTTTTaaatgtacatttaaaaaaacataaaactgcATACTTTAAATGTGGCTCATGTGGCGAAACATTCCAAAAACGGGATTTATTAATGAAACACTTAGAATTACATACGAAAAATAAATCAACAGTCGAAGAGAATTCGATCAATAAAAAGGAGATCAAATTTATCGATTGTAAGAGTTGTGCTTTAACATATATCGATAATGAACATTATTCATCACATTTAAATTCATCGGCACATCGTAAGACAAAGTTTGATATTAAAACTGAAGAGAAAATCGATACAAGTCTAAATCAAATTGATTTAgagcaaatttttgaaaaattacattcAGATGTGACTGCAGATGAGAATGTTGGTAATGGAACCGATTTAACAGCAGATAATGTTATTGATTTAATACCAACAGATTCAGTGTTGGATACAACAAAAGATGATAAAAATCATACTAATAAAGTGTATTTGTATAAATGTCCAGGATGTAGTGATTTATATGATAATAGTAATGATTTACAGTTACATATCCTAACTGTTGGCCACCATCATGTTGATTATAATTCCGAAATACAAATATTGGAAGTggataatacaaataatataattgggCAATCAATAGCATCGGATGATGGCagcgaaataaaatttttcattcataaTGATCATACtgataatgtacaattattatcgACAAGCGATAATACAGTATTATCACACAATAGTAATGATAACACGTATCATGAAATGCAACaacaacacaatacaacaaataaaacaCATGATATACATGAATTATTTCAAAGTGTTGTTGACTCTACATCAACAGCTGTGTCATCTGcagcaacagcaacaacaacaacaacaatgatCAATAGTGGTGTTGGTATTGGTGGGAGTGGTGGTACAGAACGttcaaaaatacaaatcattgatGAGAAAACGATTGATATAtcacaatttataaatatacataaaaagagTATGATGTCTAAACAGAATTATCATTTAAATGATTTGTGTACGTTGTCAATTAAAACTGAGGCACAATCAAATAATCagGTAATTTCAAATATGATATCATCACAATTGGTGTCAACATTGGATCCAACAAATAcagatataaaaacaattggtGTACCATCGTCTGCATTGGATCAAAAAGAATCAACACCGTCACTTATTTATGGGCCacaacgaaaaatttataaatgttgtCGTTGTGATTTTAAATGCTTGACACATGACATAATTAAAGCTCATATGACAAAGCACAATAATAACAATCACAAAATTGAACAACAACAATCGGAAAATGTGACGTCAATACCATCTATAGTTGAtagtaaaaatgatttttcatccgctacaacaacaacaacaacaaccgaTACTACagTAAATGAGAATAATGAAAATGAGAGTCCAACATCATTATTACATGAATGTAAacaatgtaaacaaaattttaaatcaataaatatgttGAAACGTCACAAGAATACATATCATCGTGTACCAATCTGTGCATACTGTAATAAACAGATGAAGAATTTACATATATTACGTATACACGAACAATCGCACATGAATCATGGCGATGTATGCAAATGTGATGATTGTGGTAAACAATTTAAAACGAAATGTGGTTTAAATAATCATCGACCAATACATACTggcaattataaattattttgtgaattttgtaATCGTGGTTTTATGTCGAAAGTTGTCTTGGAGGAGCATCGTAGCAAGCATACAAAAGAGGAACGTTTCATTTGCGATATATGTGGTAAAAAGTTTCAGtttaaaagcaCATATTGGATACATCGTAAATGGCATGATAATCCATATCCATACAAATGTAACTATTGCAATCGAAAATTTCGGCATACATCATTATTAGCTGTACATAAACGTAAACATACTGGCGAACGACCTTACGAATGTCCACACTGTAAACAAACATTTGCTGTGAGTGGTACACTAAAATGTCATCTAATATTACATACGGGTGTGTATCCGTTTACATGTGAAATATGTCAGCGTGGTTTTACCACACGTCATAAATATGCTGTACACTTGTCAAAGATACATGGTGATTCAAATTTATTGAACCAGAATCAAGATAAacagaataattttaaaatggtgaTCAAAGAAATTGATCATAATATCGATGATATTACAACATCGTCATCAAAAAATCACCAGGATATTACTAACACACATTTGGAGAGTGTTATTGACAATCATATGTTAATAAACGAAGAGACATCAACAGGAGTGGGACAAGTGTCGTCGAAATGTAATGGAACTGAAACTACATCGATTCTTAATAATTGGTACGAGGATAATTCTTCAATAATTGCATCATTGGTAGATTCATAA
Protein Sequence
MRTIPKWADKIQDADKNVQCVYDLCFHPKGNLIVAAGLQVLIYSTEDGSLLHALKGHKDIVYCVCCTKDGKKLASGSADKTVIIWNSKYEGILKYSHNDAVQCLAYNPTSSLLASCAISDFALWSQEQKSVQKFKINARINACSWTNDGQYLALGLGNGSVSIRNTLGEEKGRIDRPGGTEAAIWSLQWSPHKDDGDILCITDWNKNIAFYTLSGKLVGRERGLDFDPLCVSYFPGGEYILVAGTNKACTLMTKDGIKLGNVGDVQNHWIWCCAAHPSSNFVVIGCQDGTLAYYQLVFSTVHGLYQERYAFRENMTDVIIQHLITDQKVRIKCRDLIKKIAIYKDRLAVQLPERIVIYELNATEPDSMHYRVREKISQSLDCSLLVVCSEHLVVCQERRLLGLMFSGERYREWMMDSPIRYIKVAGGPPGKEGLILGLKNGQIWKIYLNDPMPILILTISAPVRCLDLNCMRNKIAVVDDNWLCQVFVMETAELLFTEHDTNSVAWNTKHEDLLSFSGDKSLGLRLVNFPAHRRCQQGLVVGFVGNKAFCLQGNIITSVQLPVSAAMYQCIDKKMFIEAYKIAHLGVTQTDWEELGSVALEQLQLDVAQKSYMYLQDIHHLNLINDLQEQQRKGENNQELLKAQVLSFRGRFKESARLYQRSGHAHRAVTMYTNLRMFDLAQDYIGVDSNTDNKSLIRQKAEWAKNINEPKAAAEMYLSIGDTRKAIEIMAEHNWIEMLEDIGRRLDKADRANLILVAEHLRRLGETTAAGDLYRRLGDDSALLTLYVEAHQWPQAFALAERQPEHKHLVYVPYAQWLVENDKFHEAQTAFHKAGQPDEAFKVLNRLIENALNEKRYNDAGYLHWILARQCLELAEMNENHKNNNINKFHENQRMAAIYYAYNTLHQYIEQPFTSYIPEALFNIARFVMNEIKNFKPKGISEFTILYSLSKQARILGAHKLCRQLLDKLRLLRIPNRFQEQVEIATLTAYTKAHNDPEDLLPMCYRCSTYNPLIGEANNICSHCHQPFEHSFVSFEVLPLVEFYLESDISDDEAVRLIQAPIEDHNNPSIERDIDETLNTLEIDNGIVVQDLFTAKLTKLEDENDGFVPIKVNRSTLQSMDPATVIICKWPSPLRYQFYRNLLPDLQISFCHSCFKTFHVDDYELQVLQKGHCPFCRASAEMLVKKELKSFVIPKIEENYYSKCYICNQNVTTSTGVELLKANLLSSNGSIPQKIAKIMGNDCMVLVSEDDCICSKCINLLNRLDHLEIEITKILDEITNYLNIKYNITSNNSIPIPAQNKRGTKRKYPDNDLFENQPEIEKQLSEMFGSPVTVTPANQLKTISPKLKNVKNTFLFKCPLCRQGFNDKTRLHFHITDSHLSKYRCHICQITFKDGDLLEKHVAKNNCTKTNNTTLLSLDNKKFKCAICSQKFETKELLNVHLKKHKTAYFKCGSCGETFQKRDLLMKHLELHTKNKSTVEENSINKKEIKFIDCKSCALTYIDNEHYSSHLNSSAHRKTKFDIKTEEKIDTSLNQIDLEQIFEKLHSDVTADENVGNGTDLTADNVIDLIPTDSVLDTTKDDKNHTNKVYLYKCPGCSDLYDNSNDLQLHILTVGHHHVDYNSEIQILEVDNTNNIIGQSIASDDGSEIKFFIHNDHTDNVQLLSTSDNTVLSHNSNDNTYHEMQQQHNTTNKTHDIHELFQSVVDSTSTAVSSAATATTTTTMINSGVGIGGSGGTERSKIQIIDEKTIDISQFINIHKKSMMSKQNYHLNDLCTLSIKTEAQSNNQVISNMISSQLVSTLDPTNTDIKTIGVPSSALDQKESTPSLIYGPQRKIYKCCRCDFKCLTHDIIKAHMTKHNNNNHKIEQQQSENVTSIPSIVDSKNDFSSATTTTTTTDTTVNENNENESPTSLLHECKQCKQNFKSINMLKRHKNTYHRVPICAYCNKQMKNLHILRIHEQSHMNHGDVCKCDDCGKQFKTKCGLNNHRPIHTGNYKLFCEFCNRGFMSKVVLEEHRSKHTKEERFICDICGKKFQFKSTYWIHRKWHDNPYPYKCNYCNRKFRHTSLLAVHKRKHTGERPYECPHCKQTFAVSGTLKCHLILHTGVYPFTCEICQRGFTTRHKYAVHLSKIHGDSNLLNQNQDKQNNFKMVIKEIDHNIDDITTSSSKNHQDITNTHLESVIDNHMLINEETSTGVGQVSSKCNGTETTSILNNWYEDNSSIIASLVDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-