Basic Information

Insect: Nineta flava
Gene Symbol: zfh1
Assembly: GCA_963920215.1
Location: OY986040.1:299028-302048[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0084 0.31 12.1 2.9 1 23 383 406 383 406 0.90

2 8 0.00051 0.019 15.9 1.8 1 23 436 458 436 458 0.99

3 8 3.2e-05 0.0012 19.7 0.2 1 23 464 487 464 487 0.97

4 8 0.00048 0.018 16.0 0.2 1 23 493 515 493 515 0.98

5 8 8e-07 3e-05 24.8 0.7 1 23 521 543 521 543 0.98

6 8 0.00022 0.0082 17.1 1.1 1 23 549 571 549 571 0.97

7 8 0.00011 0.004 18.1 1.8 1 23 577 599 577 599 0.97

8 8 0.00039 0.014 16.3 3.8 1 23 605 628 605 628 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0084	0.31	12.1	2.9	1	23	383	406	383	406	0.90
2	8	0.00051	0.019	15.9	1.8	1	23	436	458	436	458	0.99
3	8	3.2e-05	0.0012	19.7	0.2	1	23	464	487	464	487	0.97
4	8	0.00048	0.018	16.0	0.2	1	23	493	515	493	515	0.98
5	8	8e-07	3e-05	24.8	0.7	1	23	521	543	521	543	0.98
6	8	0.00022	0.0082	17.1	1.1	1	23	549	571	549	571	0.97
7	8	0.00011	0.004	18.1	1.8	1	23	577	599	577	599	0.97
8	8	0.00039	0.014	16.3	3.8	1	23	605	628	605	628	0.95

Sequence Information

Coding Sequence: atggaacAAACATATTCAATTGAAATAATCCAACCGTCCGATTTGGAGAACTTATCAACACAAGACAATGTGATTGAATTAACAGATGTAGGAATTATTGGTTTGGATTCGTTGTGTCGTTTGTGTGCGAATCGTAGCGATCATCTGATACCGATCTACGAAGGGGAAGGTGTTGACTATCAAttagaaatgaaaattaatcGTCATTTTCCATTCCAAGTCGAACGGAATGATACCTTACCAACGCACTGCTGTTATCAGTGTGCGAGCACTTTACTCACTTGGCATGAATTAATTGAAACCAGTGTGGAAGCGGATCGACGCTTGAAAGCTCTGGAGTTTGACACAGTTGTACAATTCAATCATAAACTAGAAACTTTAGAAGACACAACACAGGAAGTTATCCCCGAAGAAACCACTGAAATATATGAAGAATGTCAAGAAAATGAGATTGTCGAAAATGATGTTTCTACGAATATCGATCAACAAAGGGTCGCACAGTTACGAGCGGCCGCGCTAACCGCCAGTCGTCTACTGTCACGTCGTCAAGCTCAATCTAATTTCACTGTTGATTTACTAAATCAATCGAATTCAACCAAAGATCTGAACGCAAATACAACGGATCCAGATACGAACGATACCCTCACAGATCATAATCGATCACAATTCGAGATAAAAGATGAAAATGCCACAACAGATACGATTAAAATCGAAACAGATACGATCCGAATGGTCACAAAATTAGaagataatttaaaagaaaatcaacCAGAAGAATCAGATGACGAGTTTAAAACAGAAGATCAAGCATTGGAAGAAGAGACACAACCAGAATTAATATCATCATCGTGTACGACAAAGAAACACAAGCGAAAAATCAAAACGATCAAACAAAAGCAACCAagaattttacgaaaaaaacatCAGAATTATTTATGTGATAATGATCAAGTAGCAAAGACACAAACCACCACACAAAGTGATCAATCAGTAGTAAATagtgataatgatgatgatgatgatctaTTATTATTGACAAAGACTCAAACCAATTATAGTGATAAATTAGTGAAGACACAAACCAATCATAGTGATAAATTAGTGAAGACACAAACCACCAATGATAATACTAGCAGTGATAATGAGTTTTCGTGTGTGTTTTGTGATGAGAAATTTCGaacaagaaaattattaaacacCCACAAATATGAGAAACATGGCGTCGATGATAAATGTCGCATCATCAACAAACTGAATAAAGCCGAGATTGATAATGCACGTGTTGTGATCGATAAACGGGTCTACTATCAGTGCCAGGAGTGTGGCAAGAACCTGCACAGTCCGTACACGTACATGTGGCATCGACGCATCCACACGGGCGAACGACCGTACGTGTGTGATCTGTGCGGCAAACAGTTCCGGGTGTCACAAGGTCTGGTGCGACATTTGCGTGAAACACATGCTGGTATTAAAAATTTCCCATGTGATTTGTGCGGTCGAATGTTTGGCACGCGACGCAACGTTGATGAACATCGCCGCATCCATACGAACGAACGACCGTATGTGTGCGCTTTGTGCGGCAAATCGTTTAAACAGAAGGCATCGTTGTTTGTGCACACCCGTTCGCATTCGGATACGTTCCCGCACAAGTGTACGTATTGTGGTCAAGGCTTCCGGACGAAAGCACCGTTATTGATCCATGTGACACGGCACACCGGTGAGAAACCGTATTCGTGTGATATCTGTGGCCGTTGTTTTCGTATTAAATATGAGCTGAAGGGACACAAACTGATTCATTCGGATGTGAAACCGTTCCATTGCAGTGTGTGTGGTGTTTCATTTCGACAGAAACGTTATTTACGCAATCATAATAAAGTGAAacataatattgataataatagtagtagtaataataATCCATCATCAGTGCCTTAA
Protein Sequence: MEQTYSIEIIQPSDLENLSTQDNVIELTDVGIIGLDSLCRLCANRSDHLIPIYEGEGVDYQLEMKINRHFPFQVERNDTLPTHCCYQCASTLLTWHELIETSVEADRRLKALEFDTVVQFNHKLETLEDTTQEVIPEETTEIYEECQENEIVENDVSTNIDQQRVAQLRAAALTASRLLSRRQAQSNFTVDLLNQSNSTKDLNANTTDPDTNDTLTDHNRSQFEIKDENATTDTIKIETDTIRMVTKLEDNLKENQPEESDDEFKTEDQALEEETQPELISSSCTTKKHKRKIKTIKQKQPRILRKKHQNYLCDNDQVAKTQTTTQSDQSVVNSDNDDDDDLLLLTKTQTNYSDKLVKTQTNHSDKLVKTQTTNDNTSSDNEFSCVFCDEKFRTRKLLNTHKYEKHGVDDKCRIINKLNKAEIDNARVVIDKRVYYQCQECGKNLHSPYTYMWHRRIHTGERPYVCDLCGKQFRVSQGLVRHLRETHAGIKNFPCDLCGRMFGTRRNVDEHRRIHTNERPYVCALCGKSFKQKASLFVHTRSHSDTFPHKCTYCGQGFRTKAPLLIHVTRHTGEKPYSCDICGRCFRIKYELKGHKLIHSDVKPFHCSVCGVSFRQKRYLRNHNKVKHNIDNNSSSNNNPSSVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -