Nfla022332.2
Basic Information
- Insect
- Nineta flava
- Gene Symbol
- zfy1
- Assembly
- GCA_963920215.1
- Location
- OY986045.1:62990202-62993547[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.0019 0.072 14.1 1.8 2 23 127 148 126 148 0.94 2 17 0.00068 0.025 15.6 1.9 1 23 154 177 154 177 0.98 3 17 0.0077 0.29 12.2 0.5 2 23 185 205 184 205 0.97 4 17 0.00071 0.027 15.5 1.2 1 23 211 234 211 234 0.98 5 17 9.7e-06 0.00036 21.4 0.7 1 23 245 267 245 267 0.95 6 17 1.3e-05 0.00047 21.0 1.9 1 23 273 296 273 296 0.98 7 17 0.00022 0.0082 17.1 1.4 1 23 302 324 302 324 0.98 8 17 0.006 0.22 12.6 1.5 1 21 330 350 330 351 0.96 9 17 0.28 10 7.3 0.6 1 23 491 514 491 514 0.96 10 17 5.8e-05 0.0022 18.9 1.7 1 23 546 568 546 568 0.95 11 17 0.0024 0.088 13.8 6.0 1 23 574 597 574 597 0.97 12 17 0.014 0.52 11.4 0.1 2 23 605 625 605 625 0.96 13 17 0.00049 0.018 16.0 1.0 1 23 631 654 631 654 0.97 14 17 0.0053 0.2 12.7 1.0 1 23 663 685 663 685 0.96 15 17 9.8e-06 0.00037 21.3 0.5 1 23 691 714 691 714 0.96 16 17 0.0045 0.17 13.0 2.1 1 23 720 742 720 742 0.97 17 17 2.9e-05 0.0011 19.8 0.8 1 23 748 770 748 770 0.98
Sequence Information
- Coding Sequence
- ATGGAGTGTACAACCGTAAAGATTTGGTATGAAGATGATTTACCGCAACAGATCTGTTGTATATGTCTTAAACGATTAGAGGATGCATTCAACTTAAAGAATCAATCAGAAAATTCGGACAAAGAACTgcgaaaacttttaaaaaataaggaTGAGAATGCTGAAGAATTTAAGAATGAAATTGAAGATACTGATTTAATTGAGAGTAAAAACtttctattaaaatatgaatattcagACAATGATTATGATGAATTTTCCGATCAGAATGAAAGTCCTGAATCTAGAGATGATTTCGAATTGAAAGATATTAAACCGGATACAAATGATAATTTACagaaagaaaaacaattaaacaatattCTACCTGACAATAATAAATGTGAAATTTGtggtaaaatatttctaaataaacataaacTGAAAAAACATTTAGTGGCACACTCAAACGATCGCCCTTATAAGTGTACATTTTGTCCGAAAGCATTTAaagagaaatttattttaaataaacatttaaaaacaattcatacGGATCCGGCACGTAAAAAAGTCTGTCAGATATGTGGCAGATCGATAGTGAAAACATCATTAGAACGACACTTGAAAACACATGAGAATCCACCATCATATCAGTGTACAGAATGTACAAAGAAATTCTTAGATGCAGAAACATTAGAGAAACATTTTCGTCGTGtacataaaaaagaaacatcGTTTGATTTGTACCCGTTTTTATGTAATACATGCGGCAAAGGTTTAATATCGAAAAGTGAACTTAAACGACATATGAATTCGCATTTAAAAGAAGCGAATTTTAAATGTTCAAAATGTGGTAAAGCGTACACATCTCATGCTGGATTACGTAGTCATATTAAAGTGTTTCATTTAAATGAACGGCCATTTGTTTGTTCAGTATGTTCGAGGGCATTTCctaccaaaattattttaaaacatcatATGCGAACGCATACCGGTGAAAAACCCTTTAAATGTTTGATATGTACGAAAACGTTTGCGTTAAAATGTGTTTTACAAACGCATATGAAAATTATTCAAAATGACGAATTACCTCATCAAATTTGTGAAATATGTTTATCACAATTAcaaaatgcatttaattttaaagaactATGCGAAAATTCGGATAATGAACTGCGACAAGTCTACGAAAAGAAAAGTGGGAAAGAGGAGATGATTAttgatgaaaatataaataacagtgAGGTAAAACTTGAAACATATGATGAATATAAATCAGATCCTCCTGAATTTTTAAcggaaaaagtaaaaaatgagACAAAATGGTTTGATGACAACAAACCATCAGAAGAAGACATCCAAGATGAATTCGATGATTATGAAGATGCAGCGGAGAGTGATGGAGGTATTGAAACCACTGACAGTGAAAATGAATGTTTAAGTAAACGAATTGAACGTTCAAAACGGAAAATTGAAAAgactgaaaaatataattgcGAATTATGTAAGCATACATTTGATGGTGTATGGCGTTTAGGTGTTCATATGAAACGTATCCATAACGCCGAAGGTAAAAAATGTAGTAAATGTTCTCTAATCTGCTACCATGATTTACATTTAGAGGTGCATGAACGCTCCCATATTGATAAGAAATTCACGTGTGATATTTGCAACAAAACATTCGCAAATACACGTAAATTAAAGAAACATAAAATTGCTCATTCGACTGATCGGCCGTATCATTGTACACAGTGCGATAAATCGTTTAAAGAAAAATGCGTTCTCACACAACACATTAAGAAAATCCATATAAATCCCGATCCACATGAAGTCTGTCAAATTTGTGGTAAATCCGTTGGGAAAGCATCACTCGAACGACATTTGACCATACACGATAAACGATTGATGTATCCTTGCCTTGAATGTCCAAAGAAATTCTATAAAGAAATTTCGCTAACGAAACATTTTCGTCGTGTACATCAGAATGAAGCGCTACAATACATGTATCTGTGTAATATCTGTGGTCGTGGCCTGTTGTCCAAGGCTGAATTACGTCGTCATTTGTGTACGCATACGGGAGAGAAACCATTCGCTTGTAcaaattgtgataaaaaatataatgaccGAGGTGCGTTACGGCGACATATTAAATCGGCACATCTAGATGAACGTCCGTTTGCGTGTACTGTATGTTCCAGGGCGTTTCAtacgaaaattattttacagaATCATATGCGTAAACATACGGGAGAGCGACCGTTTCAGTGTTTAGTGTGTGGAAAGTCGTTTGGTTTTAAAACAGTATTACAGACACATATGAAAGTTCATTCTTcgtaa
- Protein Sequence
- MECTTVKIWYEDDLPQQICCICLKRLEDAFNLKNQSENSDKELRKLLKNKDENAEEFKNEIEDTDLIESKNFLLKYEYSDNDYDEFSDQNESPESRDDFELKDIKPDTNDNLQKEKQLNNILPDNNKCEICGKIFLNKHKLKKHLVAHSNDRPYKCTFCPKAFKEKFILNKHLKTIHTDPARKKVCQICGRSIVKTSLERHLKTHENPPSYQCTECTKKFLDAETLEKHFRRVHKKETSFDLYPFLCNTCGKGLISKSELKRHMNSHLKEANFKCSKCGKAYTSHAGLRSHIKVFHLNERPFVCSVCSRAFPTKIILKHHMRTHTGEKPFKCLICTKTFALKCVLQTHMKIIQNDELPHQICEICLSQLQNAFNFKELCENSDNELRQVYEKKSGKEEMIIDENINNSEVKLETYDEYKSDPPEFLTEKVKNETKWFDDNKPSEEDIQDEFDDYEDAAESDGGIETTDSENECLSKRIERSKRKIEKTEKYNCELCKHTFDGVWRLGVHMKRIHNAEGKKCSKCSLICYHDLHLEVHERSHIDKKFTCDICNKTFANTRKLKKHKIAHSTDRPYHCTQCDKSFKEKCVLTQHIKKIHINPDPHEVCQICGKSVGKASLERHLTIHDKRLMYPCLECPKKFYKEISLTKHFRRVHQNEALQYMYLCNICGRGLLSKAELRRHLCTHTGEKPFACTNCDKKYNDRGALRRHIKSAHLDERPFACTVCSRAFHTKIILQNHMRKHTGERPFQCLVCGKSFGFKTVLQTHMKVHSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -