Basic Information

Insect: Nineta flava
Gene Symbol: znf711_1
Assembly: GCA_963920215.1
Location: OY986040.1:141844358-141848145[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00013 0.0047 17.9 0.6 1 23 127 150 127 150 0.98

2 16 3.4e-05 0.0013 19.7 1.4 2 23 204 225 203 225 0.97

3 16 1.6e-06 5.9e-05 23.8 0.2 1 23 230 252 230 252 0.96

4 16 0.033 1.2 10.2 2.0 1 14 258 271 258 272 0.93

5 16 1.6 60 4.9 0.5 9 23 273 287 271 287 0.92

6 16 7.3e-07 2.7e-05 24.9 1.7 1 23 293 315 293 315 0.99

7 16 0.00013 0.005 17.8 1.0 1 23 411 434 411 434 0.98

8 16 0.0018 0.067 14.2 2.1 1 19 438 456 438 457 0.98

9 16 0.025 0.93 10.6 2.1 2 23 462 483 461 483 0.97

10 16 0.0015 0.058 14.4 0.7 2 23 490 510 489 510 0.91

11 16 4.2e-06 0.00015 22.5 0.7 1 23 515 537 515 537 0.96

12 16 8.6e-06 0.00032 21.5 2.1 1 23 543 565 543 565 0.98

13 16 2.1e-06 8e-05 23.4 1.8 1 23 571 593 571 593 0.98

14 16 5.6e-05 0.0021 19.0 4.1 1 23 599 621 599 621 0.98

15 16 7.3e-07 2.7e-05 24.9 1.7 1 23 627 649 627 649 0.99

16 16 6.5e-07 2.4e-05 25.0 2.5 3 23 657 677 655 677 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00013	0.0047	17.9	0.6	1	23	127	150	127	150	0.98
2	16	3.4e-05	0.0013	19.7	1.4	2	23	204	225	203	225	0.97
3	16	1.6e-06	5.9e-05	23.8	0.2	1	23	230	252	230	252	0.96
4	16	0.033	1.2	10.2	2.0	1	14	258	271	258	272	0.93
5	16	1.6	60	4.9	0.5	9	23	273	287	271	287	0.92
6	16	7.3e-07	2.7e-05	24.9	1.7	1	23	293	315	293	315	0.99
7	16	0.00013	0.005	17.8	1.0	1	23	411	434	411	434	0.98
8	16	0.0018	0.067	14.2	2.1	1	19	438	456	438	457	0.98
9	16	0.025	0.93	10.6	2.1	2	23	462	483	461	483	0.97
10	16	0.0015	0.058	14.4	0.7	2	23	490	510	489	510	0.91
11	16	4.2e-06	0.00015	22.5	0.7	1	23	515	537	515	537	0.96
12	16	8.6e-06	0.00032	21.5	2.1	1	23	543	565	543	565	0.98
13	16	2.1e-06	8e-05	23.4	1.8	1	23	571	593	571	593	0.98
14	16	5.6e-05	0.0021	19.0	4.1	1	23	599	621	599	621	0.98
15	16	7.3e-07	2.7e-05	24.9	1.7	1	23	627	649	627	649	0.99
16	16	6.5e-07	2.4e-05	25.0	2.5	3	23	657	677	655	677	0.98

Sequence Information

Coding Sequence: ATGTTAGAAGAGTGTGCCTCAGTACAGATTTCTACTAATGATTCGTTACCGAAAAATATCTGTTTGGAATGCataaaatatttggaaatatcttataaatttaaaaatcaatgtctatcaacagaaaaattattagaacAAATGATTGCAAACGCACAGACAAACATAAAAGTTGAATATTTCAATGATGAAAGccatgatttaaaaaatgaagataattcttattcattttttattttaaatgaagatAATCTAAATGAAATATCCCAAAATGGAGTTACCAAAAAAGAATTCGTTACTGTGAAAGAAGAATTAATTAAGGATACAAATAGAGAATTAAATGATAATGATTTAAAAGATGACAGTCCGGTACAAAAGTATAAATGTGAAGAGTGTGGAAAAGGTTTCAAATTAAAAgttgaaatttataaacatcTAAAACGTGTGCATTCGAAAGCCTTCAAGTGCATGTTCTGTGATAAACGTTGTAAATGTTCGTATGATTTAATGAAACATTCACCGGAAGTAGTTCAATGTAAAATCTGTAAACACGATTATGGATGTAAAAGTATTTTAAGAAATCATGTACACGAAGAGCACAAGAACACTACGTGCAAAATATGTGGcaagatatttcaaaataaaaactcaTATAAACGACATGTAGCGaCACATGGAGACAAACGTTATTTATGCACTTTATGTGGGAAAGCATTTGCAGATAAAGGGAATTATAATGTTCATATACGAAGACACACGggagaaagaaaatttgaatgtgaaatctgtaaaaaaacatttaaaactaaGGATTGTCAATTTAAAAGACAGGACAGTTTACGTggtcataaaaaaattcatataggtGAACGAAATTATGTTTGCACATACTGTAATAAAGCATTTATGAAAtcagataatttaaaaatgcatttacgaactcatacaggagaaaaaccGTACGGTTGTAACAAATGTGGAAAAAAAATATTATTAGAACAAAGGATTGCAAACGCACAGACAAACATAAAAGTTGAACATTTCAATGATGAAAGccatgatttaaaaaatgattcattttttattttaaatgaagatAATTTAGATGAAATATCTCAAAAGGAAGTTATCAAAAAAGAATTCGTTACTGTGAAAGAAGAATTTATTAAGGATACAAATagagaattaaataattatgattcAAAAGATGACAACAGTACGGTACAAAAGTATAAATGTGAAGAGTGTGGAACTGGTTTCAAATTAAAAGTTGAGTTTTATAAACATCTAAAACGTGTGCACTCGAAAGCCTTCAAGTGCATGTTCTGcgataaaagttataaatattcatatgatTTAATGAAACATTCACCGGAAGTAGTTCAATGTAAAATCTGTAAACAAGATTATGGATGTAAAAGTAATTTAAGAAGTCATGTACGAGTACACAAAGAGGTCAAGAAAACAATGTGCAAAATATGTGGcaagatatttaataataaatcatataaaCGACATGAAGCGaTACATGGAGACAAACGTTATTTATGCACTTTTTGTGGGAAACCATTTGCAGATAAAACgaattataatattcatatacgaagacacacgggagaaaaaccatacCAGTGTCCTCAATGTgATTGGAAATTTTGTGATAGAACTAGCTTACAAACCCATTTGGTCACACATTCGGAAGAAAGAAATTTTGAATGTGAAATCTGTAAAAAAGCATTTAAAACTAAGAATTTGTTAAGAAAACACGAGCAAACACATGCGCAGGGGAAAATTTTTTcttgtgatatttgtaataagCAATTTAAAAGACAGGCCCATATACGTcgtcataaaaaaattcatgcagGTGAACGAAATTATGTTTGCACATACTGTAATAAAGCATTTATGAAAtcagataatttaaaaatgcatttacgaactcatacaggagaaaaaccGTACGGTTGTAACAAATGTGGAAAAAGTTTTAGTCAGAAACATGCACTGAACAGTCATATGAAAATTCATTCTGAATTGCTTGATAATATCAATTCTCGTTTGCCAAACTAG
Protein Sequence: MLEECASVQISTNDSLPKNICLECIKYLEISYKFKNQCLSTEKLLEQMIANAQTNIKVEYFNDESHDLKNEDNSYSFFILNEDNLNEISQNGVTKKEFVTVKEELIKDTNRELNDNDLKDDSPVQKYKCEECGKGFKLKVEIYKHLKRVHSKAFKCMFCDKRCKCSYDLMKHSPEVVQCKICKHDYGCKSILRNHVHEEHKNTTCKICGKIFQNKNSYKRHVATHGDKRYLCTLCGKAFADKGNYNVHIRRHTGERKFECEICKKTFKTKDCQFKRQDSLRGHKKIHIGERNYVCTYCNKAFMKSDNLKMHLRTHTGEKPYGCNKCGKKILLEQRIANAQTNIKVEHFNDESHDLKNDSFFILNEDNLDEISQKEVIKKEFVTVKEEFIKDTNRELNNYDSKDDNSTVQKYKCEECGTGFKLKVEFYKHLKRVHSKAFKCMFCDKSYKYSYDLMKHSPEVVQCKICKQDYGCKSNLRSHVRVHKEVKKTMCKICGKIFNNKSYKRHEAIHGDKRYLCTFCGKPFADKTNYNIHIRRHTGEKPYQCPQCDWKFCDRTSLQTHLVTHSEERNFECEICKKAFKTKNLLRKHEQTHAQGKIFSCDICNKQFKRQAHIRRHKKIHAGERNYVCTYCNKAFMKSDNLKMHLRTHTGEKPYGCNKCGKSFSQKHALNSHMKIHSELLDNINSRLPN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -