Basic Information

Insect: Nineta flava
Gene Symbol: Fbxo27
Assembly: GCA_963920215.1
Location: OY986040.1:134249451-134273704[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 4.8 1.8e+02 3.4 4.3 1 21 126 146 126 149 0.93

2 23 0.89 33 5.7 1.6 3 23 156 177 155 177 0.96

3 23 0.11 3.9 8.7 0.2 2 23 201 223 200 223 0.94

4 23 7.7e-05 0.0029 18.5 2.0 3 23 294 314 293 314 0.98

5 23 0.28 10 7.3 4.7 1 23 320 342 320 342 0.88

6 23 9.3e-05 0.0035 18.3 1.5 1 21 348 368 348 370 0.95

7 23 0.0061 0.23 12.6 2.8 1 23 376 398 376 398 0.95

8 23 9.1e-05 0.0034 18.3 7.2 1 23 781 803 781 803 0.97

9 23 5.2e-05 0.0019 19.1 0.8 2 23 810 831 809 831 0.96

10 23 0.001 0.038 15.0 0.5 1 23 840 862 840 862 0.98

11 23 0.008 0.3 12.2 0.2 1 23 868 890 868 890 0.98

12 23 1.4e-05 0.00051 20.9 1.8 1 23 896 918 896 918 0.98

13 23 0.00043 0.016 16.2 2.6 1 23 924 946 924 946 0.96

14 23 5.3e-05 0.002 19.0 5.9 1 23 952 974 952 974 0.98

15 23 0.00064 0.024 15.6 5.3 1 23 980 1003 980 1003 0.97

16 23 0.0004 0.015 16.3 5.3 1 23 1122 1144 1122 1144 0.97

17 23 0.0016 0.06 14.4 1.3 2 23 1151 1172 1150 1172 0.96

18 23 0.0001 0.0038 18.2 1.2 1 23 1181 1203 1181 1203 0.98

19 23 0.039 1.5 10.0 0.2 1 23 1209 1231 1209 1231 0.98

20 23 0.13 4.7 8.4 6.7 1 23 1237 1259 1237 1259 0.97

21 23 8.1e-06 0.0003 21.6 3.7 1 23 1265 1287 1265 1287 0.97

22 23 3.3e-06 0.00012 22.8 2.6 1 23 1293 1315 1293 1315 0.98

23 23 5.2e-05 0.0019 19.1 4.0 1 23 1321 1344 1321 1344 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	4.8	1.8e+02	3.4	4.3	1	21	126	146	126	149	0.93
2	23	0.89	33	5.7	1.6	3	23	156	177	155	177	0.96
3	23	0.11	3.9	8.7	0.2	2	23	201	223	200	223	0.94
4	23	7.7e-05	0.0029	18.5	2.0	3	23	294	314	293	314	0.98
5	23	0.28	10	7.3	4.7	1	23	320	342	320	342	0.88
6	23	9.3e-05	0.0035	18.3	1.5	1	21	348	368	348	370	0.95
7	23	0.0061	0.23	12.6	2.8	1	23	376	398	376	398	0.95
8	23	9.1e-05	0.0034	18.3	7.2	1	23	781	803	781	803	0.97
9	23	5.2e-05	0.0019	19.1	0.8	2	23	810	831	809	831	0.96
10	23	0.001	0.038	15.0	0.5	1	23	840	862	840	862	0.98
11	23	0.008	0.3	12.2	0.2	1	23	868	890	868	890	0.98
12	23	1.4e-05	0.00051	20.9	1.8	1	23	896	918	896	918	0.98
13	23	0.00043	0.016	16.2	2.6	1	23	924	946	924	946	0.96
14	23	5.3e-05	0.002	19.0	5.9	1	23	952	974	952	974	0.98
15	23	0.00064	0.024	15.6	5.3	1	23	980	1003	980	1003	0.97
16	23	0.0004	0.015	16.3	5.3	1	23	1122	1144	1122	1144	0.97
17	23	0.0016	0.06	14.4	1.3	2	23	1151	1172	1150	1172	0.96
18	23	0.0001	0.0038	18.2	1.2	1	23	1181	1203	1181	1203	0.98
19	23	0.039	1.5	10.0	0.2	1	23	1209	1231	1209	1231	0.98
20	23	0.13	4.7	8.4	6.7	1	23	1237	1259	1237	1259	0.97
21	23	8.1e-06	0.0003	21.6	3.7	1	23	1265	1287	1265	1287	0.97
22	23	3.3e-06	0.00012	22.8	2.6	1	23	1293	1315	1293	1315	0.98
23	23	5.2e-05	0.0019	19.1	4.0	1	23	1321	1344	1321	1344	0.96

Sequence Information

Coding Sequence: ATGGTATCTATATTCGATGTAATGTCAGAATTAATTTCGTATAGTGACATGTTAAAGGAATGCGCTTCGATAACAGTTTCACTCGATGATATATTACCGAAACAATTATGTTCAGATTGTACAAATCAATTGGAATTGAGTTACAAACTCAAAATACAGTGTCTTTATTCTGAACAGTTTATGaacgatttaattaaaaatgcatCGATACAGATTGATGAATTCGATGACGATCACGTATTCGATAATGacgatattaaacaaaattttgATGATGACAATGATATAAAAGATGAAACaattgtaaaaaatgaaatacctGAACAATCTACGAACTTGCCGTTAACGTATTCAGAGAATATTCAAGTAATCGAATATAAGTGTATTCATTGTAACgagatttttaattcaaaaaatacttttgttacCCACGTAAAATGTGATCATAGTAAAACGGTTCGATGTTGTGACTATTGTGATCAAATATTTTGGTCTGGATCAGGTTTTAAACAACATATTATGAAAAAGCATGAAATTGAAACAATTGATATTAAAGAACCTAACATTGAGCAGAAAGATAAATCATGTAAAAAAGAAATCCCTTGTAAATATTGTTCAGAAAATTTCCAATTAAAACCAGATCTTATTACACACGTGAAAAATATGCATCGACAATCTCGAAAATATATTGACGTATGTAAATTATGTAGCGAAATCAGTTGGTCAACAAGAGAAAAAAAACGGCATTATTTAGTGCAGCATAAACAATGTTTTTCATGTTCgaaagaaaatattgaaaatttaaatgaattaaaggaacattttaaattacatGATCATCCAAAAGGACGTAAAGTATCTGCACCAAAAGGACGTTTATGCGCTTATTGTGGGAAAACACTGAATAGTAATTCTCATTATAAAGCTCATTTACGAACTCATACTGGCGAAAAACCTTATAGCTGTGATTTCTGTggtaaaaaattttccttatgGTATTCATTACACTGTCATAAAGTGATCCATACAcaagagaaaaattttaagtgtacAGTATGCGAACGAAGTTTTCCTAGAGCTGCTTCATTACGCCGGCATATTTTATGCCATTCCGATGAACGGAATTTTCCATGTGATATATGTGATAAACGATTTAAGTGTAGACGTGAATTAACACGACATAAAGTCATTCATACAGgttaTTTCATACCACCAGAAATCTTATCATTGATATTAAGTAatgttgatgtgaaaacattgtACAAACATTGTACACGGGTATGTAAACTATGGAATGCAATCATACAAGAATTTGTATGGaaattaaaatgtgaaaaagaattattaaataaacaacaattaCAATTAATACGACAAAAACAATATCCAAACAATGTGTATCAGATGATAtgtgtttttcaaaaatcattttatacaaatttcattgaaaatccATGCGGTTTAAATGGTTTTAATCATTGGACAATGGATCGTAATGGCGGTGATCGTTTTATAATTGAAGATTGTACAATAATGGATCAAACCTATTGTGAAGTGAAAGATGATATGCTATCAAATAATGcaacaaaatgttttacaaCATCGTATTGTGCTTGTAGTAAACTACAAGTGATTGATTTGTACAAACGTAATGGTAAGGGTGGGGGTGTAACAGAACAGTTTCTGGATGAATATCAACCACCGATTTACGTCAGTGAATGGTATGGCAGTCGACGTGATTGTGGATGTACTTATCAATTACATGTTATTCTATTGGATTCAAAGTTTCAACCGATCCGTCGATGTAATTgcaatttttcatttcattatcGCGTTGAACAATGGTTAGgtggtttttttcaaaaagtTGAATATGTATTCAAAAATTATGGACCAAATGTACGatatatatctttttatcaTATTGGTCAAGATACCCAATTTTGGGCTGGACATTATGGTAGTAAATTTACCAATGCAAATGTACAATTGTTTTATCCAAATGATACATCTAAAGATCATGTGATCAATGAACATTCACAAGAATCATATCATGAAGATTatGTTACGAACATTAAAACAGAGACAAATGTTGACGAGCCAAGAAGTTTTATAGATGTACCAGTATTTTCAAATGTAGATGATAAAGCACCGAAAAAACTCGAAATTAATATCCTTTctgataaaagtttatttcaatGTAACGAAGTAAAACCTGAAATCAATGATTTATTGAAAACTGGAAGTTCGATAACTCCATCTAATGAAGATGAAATACGTAGACCCACAGAGCCTACAGGTAAAAAGAGACGTGGCCGAAAGGTGCAAGTCATAATACAATATGATTGTGATAAATGTGGAAAATCATTTAAGAAAAGATCACACTTACGAGAACATCATTTTACGCATACTGATGAAAAACCAGTGAAATGCGAAAAATGTGGAAAAGGATTTAAGCACGCAAAAGCATTAAAAGCACATGCAATAAAACATGCACCGCCGCAAGTCAAATATCGTTACAGATGTGATACTTGTAGTAAAATGTTAATTTCATCGAGTGCATTaatcaatcataaaaaaattcatgatGgAATTTATGGGTATGTTTGCGAAGTATGTGGTGCTAAACATCGGACACCAAATAATTTGGCTGCTCATCGTCTCACCCATCAAACAGAAACTCCATTCAGTTGTACATTATGTACAAAAGCCTTTAAGACTAAATATGGACTCAAGAAACATCAAATAGTTCACAGTGATTTAAAACCGCATATTTGTGATATTTgtggacaaaaatttaaagtgaaACGAAGTTTAGAGCAACATAAAAAATCACATTCCACAGAGTTACCATTTGAATGCAGTCATTGTAAAAAACGTTTCCGAGATAAACGTTTCTTAACGgttCATATGAGACAACACACAGGAGAGCGTCCATACTCGTGCAAAGAATGCAATCATCATTTTACAAATGGTTCAAATTATATCAAACACATGCGAGGAAGACACGGAAGAACTTCTTCTACTTCTTCGGCAGCAGTACAACAGCCTGCTGCTGGCGGTGTACAACAGCCTGTTACCGatGTTACGAACATTAAAACAGAGACAAATGTTGACGAGCCAAGAGGTTTTATTGATGTACCGATATTTTCAAATGTAGATGATAAAGCACCGAAAAAACTCGAAATTAATATCCTTTctgataaaagtttatttcaaagTAATGAAGTAAAATCTGAAATCAATGATTTATTGAAAACTGGAAGTTCGACAACTCCATCTAAAGAAGATGAAATAAATAAGAAGGAAGCAGAGCCTGCAGGTAAAAAAAGACGTGGCCGAAAAGTACAAGTCATAGTACAATATGATTGTGATAAATGTGGAAAATCATTTAAGAAAAGATCACGATTACGAGAACATCATTTTACGCATACTGACGAAAAACCAGTGAAATGCGATACATGCGGAAAAggATTTAAGCACGACAAAGCGTTAAAAGCACattcaataaaacatttaccGACGGAAAAGAAGTATCGTTTCAAATGTGAAACTTGTAGTCGAATGTTTATTACATCGAGTGCATTaacattacataaaaaaattcatgcAGGAATTTATGGGTATGTTTGCGAACTTTGTGGTGCTAAACATCGGACACCAAATAGTTTGGCAGCTCATCGTCTCACCCATCAATCGGACACTCCATTCCATTGTACATTATGTACAAAACAATTTAAGACTAAAGATGCGTGCAAGAGACATCAAATAGTTCACAGTGATTTAAAACCGCACTCTTGTAATATTTGTGGGCAAtcatttaaagtaaaaaaaagtttgaagcaACATATGAAATCACATTCCACAGATTTACCATTTGAATGCAGCTATTGTAAAAAACGTTTCCGAGATAAAGGTTTTCTAACGgcTCATATGAGACAACACACAGGAGAGCGTCCATACTCGTGCAAAGAATGCAATCATCAGTTTACAAATGcctcaaattataaaaaacacatGCAAGGACGCCATGGTGAAACTGTTTCTACTGCTGCGTCGGCACTGCGGTCTGGTACAGACCAGAATCGCGTACAACAACTTGGTACAGGTCCGAGCCGTGTACAACAGCCTGGTACAAGTCAAAGCCATGTACAACAGCCTGGTCCAAGTCAAAGCCGTGTGCAACAACCTGTTACCGGTCAGAGCCGTGTACCACATCCTGGTCAGGTCCAGGGTCGTCCCGATCAGTATCATCCATTTGGACAGATGCAATGCGATGTTTTTCCAGTTCTTACCTCTTTGAATTTTAGTTAA
Protein Sequence: MVSIFDVMSELISYSDMLKECASITVSLDDILPKQLCSDCTNQLELSYKLKIQCLYSEQFMNDLIKNASIQIDEFDDDHVFDNDDIKQNFDDDNDIKDETIVKNEIPEQSTNLPLTYSENIQVIEYKCIHCNEIFNSKNTFVTHVKCDHSKTVRCCDYCDQIFWSGSGFKQHIMKKHEIETIDIKEPNIEQKDKSCKKEIPCKYCSENFQLKPDLITHVKNMHRQSRKYIDVCKLCSEISWSTREKKRHYLVQHKQCFSCSKENIENLNELKEHFKLHDHPKGRKVSAPKGRLCAYCGKTLNSNSHYKAHLRTHTGEKPYSCDFCGKKFSLWYSLHCHKVIHTQEKNFKCTVCERSFPRAASLRRHILCHSDERNFPCDICDKRFKCRRELTRHKVIHTGYFIPPEILSLILSNVDVKTLYKHCTRVCKLWNAIIQEFVWKLKCEKELLNKQQLQLIRQKQYPNNVYQMICVFQKSFYTNFIENPCGLNGFNHWTMDRNGGDRFIIEDCTIMDQTYCEVKDDMLSNNATKCFTTSYCACSKLQVIDLYKRNGKGGGVTEQFLDEYQPPIYVSEWYGSRRDCGCTYQLHVILLDSKFQPIRRCNCNFSFHYRVEQWLGGFFQKVEYVFKNYGPNVRYISFYHIGQDTQFWAGHYGSKFTNANVQLFYPNDTSKDHVINEHSQESYHEDYVTNIKTETNVDEPRSFIDVPVFSNVDDKAPKKLEINILSDKSLFQCNEVKPEINDLLKTGSSITPSNEDEIRRPTEPTGKKRRGRKVQVIIQYDCDKCGKSFKKRSHLREHHFTHTDEKPVKCEKCGKGFKHAKALKAHAIKHAPPQVKYRYRCDTCSKMLISSSALINHKKIHDGIYGYVCEVCGAKHRTPNNLAAHRLTHQTETPFSCTLCTKAFKTKYGLKKHQIVHSDLKPHICDICGQKFKVKRSLEQHKKSHSTELPFECSHCKKRFRDKRFLTVHMRQHTGERPYSCKECNHHFTNGSNYIKHMRGRHGRTSSTSSAAVQQPAAGGVQQPVTDVTNIKTETNVDEPRGFIDVPIFSNVDDKAPKKLEINILSDKSLFQSNEVKSEINDLLKTGSSTTPSKEDEINKKEAEPAGKKRRGRKVQVIVQYDCDKCGKSFKKRSRLREHHFTHTDEKPVKCDTCGKGFKHDKALKAHSIKHLPTEKKYRFKCETCSRMFITSSALTLHKKIHAGIYGYVCELCGAKHRTPNSLAAHRLTHQSDTPFHCTLCTKQFKTKDACKRHQIVHSDLKPHSCNICGQSFKVKKSLKQHMKSHSTDLPFECSYCKKRFRDKGFLTAHMRQHTGERPYSCKECNHQFTNASNYKKHMQGRHGETVSTAASALRSGTDQNRVQQLGTGPSRVQQPGTSQSHVQQPGPSQSRVQQPVTGQSRVPHPGQVQGRPDQYHPFGQMQCDVFPVLTSLNFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -