Nfla004730.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nineta flava
Gene Symbol
-
Assembly
GCA_963920215.1
Location
OY986040.1:113122218-113126925[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 35 0.00017 0.0065 17.4 3.6 2 23 216 237 215 237 0.97
2 35 6.3e-05 0.0023 18.8 0.4 1 23 243 265 243 265 0.92
3 35 4.8e-06 0.00018 22.3 0.3 1 23 271 293 271 293 0.98
4 35 1.5e-06 5.6e-05 23.9 4.2 1 23 299 321 299 321 0.98
5 35 4.5e-06 0.00017 22.4 1.6 1 23 327 349 327 349 0.97
6 35 1.3e-05 0.00049 20.9 3.0 1 23 429 451 429 451 0.98
7 35 1.2e-05 0.00044 21.1 0.7 1 23 457 479 457 479 0.99
8 35 4.8e-05 0.0018 19.2 5.3 1 23 485 507 485 507 0.99
9 35 5.6e-05 0.0021 19.0 1.5 1 23 513 535 513 535 0.99
10 35 8.7e-07 3.2e-05 24.7 2.7 1 23 541 563 541 563 0.98
11 35 2.8e-06 0.00011 23.0 4.7 1 23 569 591 569 591 0.99
12 35 1.7e-05 0.00062 20.6 3.5 1 23 624 646 624 646 0.99
13 35 9.6e-05 0.0036 18.2 1.5 1 23 652 674 652 674 0.99
14 35 1.8e-07 6.9e-06 26.8 1.4 1 23 680 702 680 702 0.99
15 35 3.8e-07 1.4e-05 25.8 0.9 1 23 708 730 708 730 0.99
16 35 6.2e-05 0.0023 18.8 5.8 1 23 736 758 736 758 0.97
17 35 0.00025 0.0094 16.9 2.1 1 23 764 786 764 786 0.97
18 35 2.8e-06 0.0001 23.1 0.7 1 23 792 814 792 814 0.98
19 35 3.3e-05 0.0012 19.7 1.1 1 23 1060 1083 1060 1083 0.96
20 35 0.00033 0.012 16.5 6.2 1 23 1089 1111 1089 1111 0.98
21 35 6.5e-08 2.4e-06 28.2 1.8 1 23 1117 1139 1117 1139 0.98
22 35 1.5e-07 5.5e-06 27.1 0.3 1 23 1145 1167 1145 1167 0.99
23 35 3.3e-07 1.2e-05 26.0 1.3 1 23 1173 1195 1173 1195 0.99
24 35 3.4e-07 1.3e-05 25.9 1.4 1 23 1201 1223 1201 1223 0.99
25 35 2.4e-05 0.0009 20.1 3.3 1 23 1229 1251 1229 1251 0.96
26 35 2.4e-08 9e-07 29.5 0.3 1 23 1257 1279 1257 1279 0.98
27 35 1.6e-05 0.0006 20.7 2.5 1 23 1285 1307 1285 1307 0.99
28 35 6.4e-07 2.4e-05 25.1 1.0 1 23 1313 1335 1313 1335 0.99
29 35 4.8e-07 1.8e-05 25.5 0.9 1 23 1341 1363 1341 1363 0.99
30 35 4.1e-07 1.5e-05 25.7 2.1 1 23 1369 1391 1369 1391 0.99
31 35 1.8e-05 0.00067 20.5 1.2 1 23 1397 1419 1397 1419 0.98
32 35 5.2e-06 0.00019 22.2 4.5 1 23 1425 1447 1425 1447 0.98
33 35 2.8e-05 0.0011 19.9 1.8 1 23 1453 1475 1453 1475 0.99
34 35 2.5e-06 9.4e-05 23.2 4.2 1 23 1481 1503 1481 1503 0.98
35 35 0.00042 0.016 16.2 1.2 1 23 1509 1531 1509 1531 0.98

Sequence Information

Coding Sequence
ATGTCTGGGTGTGCTGTAAAATGGTGTAAAAATTGGGATGAAAATACAAACGATAAAACCATACAATATTTTCCATTCCCACATGATCCAATAATTGCACAAAAATGGTTGGAGGCATGTAATGTTGATAATTTCAGTAACCTCCAAAGTGGACATGTTTGTGCCATACATTTTACAAATGATTGTTTTATGACATCAGATTATTTAATTGCACCTGGGTGTGCACCTAGTGAAGAACTCACACCAAATGCAATACCAACAAGATATTTAAACTTTGAACCTGTACCTCTTCCGAtccatacaaatataaatacatcACAATCAGGCATGGATTCGGATGGTGTTAAAATTGAACACATCGATATGGAACAAAATAGTGGATTTTTGATCAAACAAGAAATTAAAGAAGAACTCGAAAATGACGGTAATAAAAGTGATGGAAACgaaaaacaatgtatagtgtgtaataaaatgtgTGAAAGCGGTTCCTTTGATCGTAAATGTACGGAGTGCAGAGCACAAGGTACAAATTCATCAGCTAGTGATACCGACCAACCTGATTTAAATAGTTCCctgaaaaacttatataaaacacGATTTTTGAGTAAACGTAAATCTAAAAGTGGAGGTGAAAAACGAACTTGGAAATGTGATACTTGTGACAAAATTTTTACAGCGCATAGTCATTTAAAACGACATGTTAAAATTCATACGGGTGAAAAATCGTATCAGTGTATAGCGTGTGGAAAAACATTTACCCAACAAAGTAGTTTAACAATACATGAGCGGATCCATACAGGAGAACGACCTTATGCATGTGAATATTGTGATAAGACCTTTATCGATGGTGATAGTTTAACGCGTCATGAACGAACTCATACCGGAGAACGACGTTATAAGTGTAATATCTGTGAGAAAACGTACACGACTCAGAGTCATTTAAAACGCCATGAAAAAATCCATTCAGGAGATCGACCTTTTAAATGTATCATCTGTGAAAAAACCTTCACATCACAAAGTAATCTAAACACTCACATGCAAAGTCATACTGGCGATCGACACTATAATAATCATTCGTCGTCATCGTCAACGGGTATGTATAATACCCCAGATACTTATATGCCAACGTATACCCACTTAACGAATCATATGTTAGCCGAAACTGGAGAAAAATCATATGAAAATACTGCCACTCCGATAAAAGCAAGTAATACAACTCCTACAGCTCCTCAATTACCGCCCTTAGCACCTGGTGACAAACCAGTGCCACCTGGTGAAAAACCTCACAAATGTCCCGATTGCGATCAAGCATTTAATCACTACAGTAATTTAGTACGACATTCTCGAATACATTTGAGTGAGAAAACGTACGTTTGTGAATATTGTGATCAAACATTTTTGAATCAAAGTACCTTAACAATTCATATACGGACGCACACCGGTGAACGACcttataaatgtaatatttgtggACAGACATTTATCGTCCAATGTCATTTAAAACGTCATGAAAAAACACATACCGGCGATCGTCCGTACAAATgtgaattttgtaataaaacatttatcgaTTCGAGTGGAAAAACTCGACATGTTCGTATTCATACAGGCGAGCGCCCGTACAAATGTAATATATGCGATAAAACATTTATCGTACAAAGCCATTTGAAACGTCACGAGAAAATTCACACCGGAGATCGACCGTACAAATGTGATCATTGTACGAAAGCATTCCGAACGCAGAGTAACTTAAACACACATAAAAAGGTTcacaaaaagaagaaaaaacgtAGGAATGCCTCGGATTCGGAAAGTGATTCAGAACGTTCTAACGATTCGGATGATTCATTTTGGGGTGGAACggaaatgtttaaatgtaacgTGTGTGacgaacaatttaaaaaacagaCTGAATTAAAGAAACATCGTAAAACGCATGCCAAAGTACAATCATACAAGTGTGACGTATGCGAAAAAGAATTTAAATCTCGTATTGATTTTGTTCGACATAGTCGTACTCACACCGGGGAAAAACCGTATCAATGTAATTTCTGTGGGAAAACATTTACCCAACAAAGTAGTTTAACAATTCACGAGCGTATTCATTCGGGAGAGAAGCCATATACATGCGAAATATGCAATAAGAAATTTAAAGATGGCGATAGTTTAACGCGGCATATGCGTGTTCATACCGGAGAACGACCGTATAAGTGTAATATTTGTGAGAAAACATTTAAGGTTCACAGTCATCTAAAACGGCATGAACAATTACATACCGGTTTACGACCATACAAATGTATCATTTGTGAGAAAACATTTACGACccaattcaatttgaattcacATTCGAATACACATTTCGGTGAGAAACCGTATTCGtgtaatgtttgtaataaaaaattcattgatCAAGCAGGTTTATCGAAACATATGCGTAACCATAATGTTGAACCTCCACCCAATCCATTTGAATCAATGAATTGTGGTCCATCTTACCCTCAACACAATAATTTAATGCCACCTGCTCCAAGAGTTGATCTTCATGATTCGATGTTAAAGCCATCGTACACTCCCGAAAGTACAAGCATGCCTGAAGCTGTTTATCAACGGAATTTAAATCCTATGAATATGGGTACCTATAATAACTATCCCCCGAGTGCACCATTAATGGATCCCACACCGTATAATAACCTATGGGGGGATATGTCAGGAATGAAAATTCCATCGTACACAAATGATCCATACAAATCGGAAATGCCtgataataaaatgtttgatgAACAAAATAATGACCATCCTTCTTTGGATATGAAATCCAATAATCAAATCGAACCGAAGGATGTTGTTCAAACGGAAATCAAGGAAGAAGGTACCACGGAAGAAGTTCTCTCTCAAGTGGaggatattataaaaaaagaaaatgatataaaattacgCTGTGTAATGTGCAATAAAATGTGTGAAGGAGATATCAAGAACTATACTAAAAATGATAATGGATATCTATGCACCACTTGCGGGGAACAAGGGAGTCAAGATGAGGAGGACGATCGCCAATCCAATCATTCCAACGACACGGTTATGGATAACAATGATAATGACAATACTGGATTCTTAAGTGATTTTTCTGAAGAAAAATTCGAAATTGAAAAATACCCAGACGATCCGACAAAACcctataaatgtaaaatatgtgGAAAAGGTTTCAAAAAACAGAATGTATTAAAACGTCATGAAAAATTGCCGCATAATGGAAGACGGCCGCATAAATGTGAGacgtgtaataaaattttcaaaaatttatcacgTTTAAAACGGCATAAAAAAACGCATACGGGTGAGCGACCATACCAATGTAATATCTGTGGAAAGACATTCACACAACAAAATAATCTAACAAAACATAATCGAATTCACACGGGTGAAAAACCGTACACATGCGAAGTATGTGGTAAGCCATTCAAAGATTCCGATAGTTTAACAAAGCATGTGCGTATTCATACCGGGGAGCGACCATACAAATGTGCCATTTGCGGTAAATCTTTCATAGTACAAAGTCATTTGAAACGGCATGAACGTATTCATACCGGTGACCGACCATACAAGTGTGAAATATGTGAGAAAGCATTCCGTACACAAAGTAATCTGAATACGCATACTAGTACGCATTTCGGTGAAAAACCGCATGCGTGTGATCTATGTAACAAAACGTTTACACAACTCTCAACGTTAACCAAACATAAGCGTATTCATACGGGAGAAAAGCCATTCACATGTACAatttgtggtaaaacatttaTCGATGCCAGCAGCTTAACGAAACATATCCGAGTACATACCGGTGAAAAACCGTACAAATGCAATGAATGTGATCAACATTTTGCGTTACGTAGTAACTTAAGTCGACATGCGCGAACTCACACCGGCGAACGACCATACACATGTGACATATGTGAAAAAACATTTATCGATTCGAGTGGTCTAACGAAACATAAGCGTACGCATAGTGGGGAGAAACCGTATAAATGTAACATCTGTGATAAAGCATTTACGCAACAGAACAATTTAACAGAACATTCACGCATCCATACGGGCGAGAGTCCTTTCAAATGTAAATACTGTCAACAAGCATTTCCACGACAAAGTAATCTAACACAGCACGTGCGTACGCATACCGGTGAACGTCCATTCCGTTGTGATGTCTGCTTCCAAACGTTTGCTCGTTTGGATAGTTTAACGCAACATATGCGTAATCATACTGGTGAAAGGCCGTATAAGTGTCAAAcatgtgacaaaacatttacgcGACCGGATAGTTTACATCGACATAAGAAGATACATACGGGCGAGCGTGCGTACAAGTGTGCCACGTGCGAGAAAACATTTATACAGCATGGTAACTTGATACAGCATGAGCGTACGCATACGGGTGAGAAACCGTTTAAATGTAATGTGTGTGATAAACGTTTTACAAGTCGCAGTCATTTGAAAGTCCATTCACGCATTCATACCAGAGATAAATGTTTTAAGTGTAATATTTGTGATAAAGCGTTCTTAGATACGGATCGATTGCGAAAACATCAGAAGATTCATACGAAAAATGTACCATTTATGATTAAGAGTGAATCGTATGATTtgtaa
Protein Sequence
MSGCAVKWCKNWDENTNDKTIQYFPFPHDPIIAQKWLEACNVDNFSNLQSGHVCAIHFTNDCFMTSDYLIAPGCAPSEELTPNAIPTRYLNFEPVPLPIHTNINTSQSGMDSDGVKIEHIDMEQNSGFLIKQEIKEELENDGNKSDGNEKQCIVCNKMCESGSFDRKCTECRAQGTNSSASDTDQPDLNSSLKNLYKTRFLSKRKSKSGGEKRTWKCDTCDKIFTAHSHLKRHVKIHTGEKSYQCIACGKTFTQQSSLTIHERIHTGERPYACEYCDKTFIDGDSLTRHERTHTGERRYKCNICEKTYTTQSHLKRHEKIHSGDRPFKCIICEKTFTSQSNLNTHMQSHTGDRHYNNHSSSSSTGMYNTPDTYMPTYTHLTNHMLAETGEKSYENTATPIKASNTTPTAPQLPPLAPGDKPVPPGEKPHKCPDCDQAFNHYSNLVRHSRIHLSEKTYVCEYCDQTFLNQSTLTIHIRTHTGERPYKCNICGQTFIVQCHLKRHEKTHTGDRPYKCEFCNKTFIDSSGKTRHVRIHTGERPYKCNICDKTFIVQSHLKRHEKIHTGDRPYKCDHCTKAFRTQSNLNTHKKVHKKKKKRRNASDSESDSERSNDSDDSFWGGTEMFKCNVCDEQFKKQTELKKHRKTHAKVQSYKCDVCEKEFKSRIDFVRHSRTHTGEKPYQCNFCGKTFTQQSSLTIHERIHSGEKPYTCEICNKKFKDGDSLTRHMRVHTGERPYKCNICEKTFKVHSHLKRHEQLHTGLRPYKCIICEKTFTTQFNLNSHSNTHFGEKPYSCNVCNKKFIDQAGLSKHMRNHNVEPPPNPFESMNCGPSYPQHNNLMPPAPRVDLHDSMLKPSYTPESTSMPEAVYQRNLNPMNMGTYNNYPPSAPLMDPTPYNNLWGDMSGMKIPSYTNDPYKSEMPDNKMFDEQNNDHPSLDMKSNNQIEPKDVVQTEIKEEGTTEEVLSQVEDIIKKENDIKLRCVMCNKMCEGDIKNYTKNDNGYLCTTCGEQGSQDEEDDRQSNHSNDTVMDNNDNDNTGFLSDFSEEKFEIEKYPDDPTKPYKCKICGKGFKKQNVLKRHEKLPHNGRRPHKCETCNKIFKNLSRLKRHKKTHTGERPYQCNICGKTFTQQNNLTKHNRIHTGEKPYTCEVCGKPFKDSDSLTKHVRIHTGERPYKCAICGKSFIVQSHLKRHERIHTGDRPYKCEICEKAFRTQSNLNTHTSTHFGEKPHACDLCNKTFTQLSTLTKHKRIHTGEKPFTCTICGKTFIDASSLTKHIRVHTGEKPYKCNECDQHFALRSNLSRHARTHTGERPYTCDICEKTFIDSSGLTKHKRTHSGEKPYKCNICDKAFTQQNNLTEHSRIHTGESPFKCKYCQQAFPRQSNLTQHVRTHTGERPFRCDVCFQTFARLDSLTQHMRNHTGERPYKCQTCDKTFTRPDSLHRHKKIHTGERAYKCATCEKTFIQHGNLIQHERTHTGEKPFKCNVCDKRFTSRSHLKVHSRIHTRDKCFKCNICDKAFLDTDRLRKHQKIHTKNVPFMIKSESYDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01060714;
90% Identity
iTF_01060714;
80% Identity
iTF_01060714;