Nfla004469.1
Basic Information
- Insect
- Nineta flava
- Gene Symbol
- bab1
- Assembly
- GCA_963920215.1
- Location
- OY986040.1:102134346-102138824[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6e-15 2e-11 44.0 0.1 3 45 375 417 373 417 0.92
Sequence Information
- Coding Sequence
- ATGAATATCGGTAACCAGCAAGCTCAACAATATTGTTTACGATGGAACAACCAtcgtataaatttattaacagtATTTGATGAACTCTTACAAAATGAAGCCTTCACAGATGTGACGCTAGCATGTGAAGGCGGATCAGCGAAATGCCACAAAATGGTTTTAGCTTCATGCTCATCATACTTTCAAAGTATATTCACTGAACTAGTACACCCGTGTACACATCCAGTGGTTGTACTCAAAGATGTTAAATTATTAGAGATTAAAGCAATATTGGAGTATATGTATCGCGGTGAAGTCAATGTGGCACAAGATGAATTAGCTGCATTATTAAAGGTAGCAGAGGCATTAAAAGTTAAAGGTTTAATTGAAGAGAATCGCCATTCAAATGTCTCACAAAGTAGCAAATCGACAGCAATGAAACGAGAGGAACAACATATCGAACACAATTCACCGCCAACAATTACAACATcaacaaataatattcaatcTGCTGCGCATAGTAGCAGTAGCAATGGATCACCCCCACATTCTACAGGTATTAATAATGGACCACATGCATTTTCGAAAAGTAGTCCATACAATATGTATGGAAAATCACCAATAGAGCGTGGAGCACGTATGGGATTACCAATGTGGGCAGTACCTGGAATGTCAGTACCACATCACGCATCCACCGTTACACCTCCATCAGCCGTTGCCGCATCCATGTTATCTAGTTGTTATGAAGCCGCCAGTCCCGATATGTCACCATTAAAACGTAAGAAAATGTCTAGCATGATGATGAGCCGTGATACACCTATTTTACGTACAGTACTTGGACAAGGACAAGGACAAGGACAAGCTGATTCATCCCAACCGGTATCATTGGTATGTCATCCGGATAGTCATGAAAATTTACACTCAAATGGATCGGCATATGATAATGATAAGGGACAAAAAAGCGAACCATCTGATGAGGCACAATCACCATACACAGATATTACTGATGACGATGATAAAACAAAACTACAACACTTAGCGGCAACATCACCATATTCAAACGACATGCGATTATCAACTGGAATAGCCACATATGTACCAACACAAAAACCAGAATGGAAACGATATAAACAGTATACACGAAATGATATAATGTCAGCAATCGAAGCCGTACGCACTGGTATGAGCGCATTACAAGCAGCACGTAAATACGGTGTCCCATCACGAACATTATAcgataaagtaaaaaaattgggTATAACAACATCAAGGCCTTTTAAACGCGGATCAAACGGAAGTAGCATAATGTTTCCTTACGGTATAAGTGGTACAAGTTCTCCTTACGGTGGTCATATTCATGAAGGTGAAGAAGCCGCTATATCTGGACACCATCCGAATATGACGTTAGAGGGTAGTTTCTTTCAACATTCTATAAGTGCTACAGCGAATGGTCCAGGTGGTCGATCGCCAAGTCCCAGTCCTAGTTTAGTACAATATATGCGACAAAGTAGCCTAACACCGTCCCCACCTGATGACCACCACCGCAGCGAAACAAATGGTAGCTCAGAACGTGATCGCGATGAAGACAATGATGATGACCAAGTTGAAGATTTATCGATACAACGTAAAGACGGACCCACGCCACAACAATCACGTGTAATTGTACCACCTATGAATCAAGTATcgacaattataaaaaaagaaatggaaccGATGAAAgatcaaaatttatgtgaagATTTGCGGCGAGAAGTTCAGGTAGACGATGGAAATTAA
- Protein Sequence
- MNIGNQQAQQYCLRWNNHRINLLTVFDELLQNEAFTDVTLACEGGSAKCHKMVLASCSSYFQSIFTELVHPCTHPVVVLKDVKLLEIKAILEYMYRGEVNVAQDELAALLKVAEALKVKGLIEENRHSNVSQSSKSTAMKREEQHIEHNSPPTITTSTNNIQSAAHSSSSNGSPPHSTGINNGPHAFSKSSPYNMYGKSPIERGARMGLPMWAVPGMSVPHHASTVTPPSAVAASMLSSCYEAASPDMSPLKRKKMSSMMMSRDTPILRTVLGQGQGQGQADSSQPVSLVCHPDSHENLHSNGSAYDNDKGQKSEPSDEAQSPYTDITDDDDKTKLQHLAATSPYSNDMRLSTGIATYVPTQKPEWKRYKQYTRNDIMSAIEAVRTGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGSSIMFPYGISGTSSPYGGHIHEGEEAAISGHHPNMTLEGSFFQHSISATANGPGGRSPSPSPSLVQYMRQSSLTPSPPDDHHRSETNGSSERDRDEDNDDDQVEDLSIQRKDGPTPQQSRVIVPPMNQVSTIIKKEMEPMKDQNLCEDLRREVQVDDGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00332534;
- 90% Identity
- iTF_00332534;
- 80% Identity
- iTF_01060835;