Nfla019084.1
Basic Information
- Insect
- Nineta flava
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963920215.1
- Location
- OY986044.1:44064889-44067441[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-18 5.4e-15 55.4 0.1 1 45 11 56 11 56 0.96 2 2 6e-19 2e-15 56.8 0.0 1 43 421 464 421 466 0.95
Sequence Information
- Coding Sequence
- ATGTCAACGGTGACTGGACGACGAACATACACCGAAGATGAACTACAAGCCGCCTTACGTGACATACAATCTGGTAAATTGGGTACACGTCGTGCAGCTGTTATATATGGTATACCACGCTCCACCTTACGTAATAAAGTCTATAAGTTAGCAATGGAACGTGAACGGGAAAATCATTTAGTATTATCCGCCGCTCCAGTCAAAATAGAAGATGATGAAACAAATGTAACGACTGAAGAGAAAGAATTGTCGGGTGATGAAGAGGAGAAAGAAGTTGAAAAAGTATTACAAAAACCGTTGTTGTCGATGGACGATATTTTACGGTTTTCCACATTAGAAACACCAATAGcggaaaatttaaaacatttactgCAAAAAGGTGGTTGTAAAGATACGCCAGAAAGTTTAGAAGCAAATAATTTTGCTCCGTATATACAATCATTGTTGTTACGTGCGTCTAGCGGTTTGATCTCAGGACATAAATCTGATCAATTAATGAGTGCAATTAAATTAACTGAAACGGTACAAAAATTGTTAGCCGAATCAGAACAATCTGACCAACATTCAGATATTGTGAACAATGGTTGTGGTACCACTGAACGTAGTTTGTCACGACAGAGTTCCACAAACTCTGTAATAATTCGTAACGATAAAATATTACCTCCAATGAAATCAGGCACACCAGAAGTGATTGACACAGAAACAAATGATTCCCAACAGCAAACCAGTGATTCACCATCAAATGTGATACTCAAAATTCCGTCCTTCAAACCGACAACCAGTAAAAATGGTGGTGATATATTTCGACAAAGTCCAAATGTATTAGATCCACAAACAACGTTAAATATGACATCCCCACATCATGGGAGTGGGAGTATTGGTGGTGGCGAATCAAATTCACCACCAGCTGCTATACTTGGTAAAGGTATTATGTCGTTGAAGGATGTCATTGCCAAGAGTATCAGTCAAAAGTTTCAACAGAATGATCAAATGAGTTTGAAAATGGCAGCGGCTGTGGCTACTTCCCCAGTTATTGATATGGATTTCAATTCAATCAAACGTGGTCGATATACACCACCACCATCAATGGGTGGTGGAATATCGGTTATTAAAAATCATCAAGATTTGCATGCAAATCGACAATTTCCGCAACCACCAAAAcctcaaaataataattcatcagTTAATTCTCAGCAACAATCCCAGCAGATGGGAGGAGGGAAAGGAACACGACCGAAACGTGGAAAATATCGTAATTATGATCGTGATAGTCTAGTAGAAGCTGTGCGCGCCGTACAACGTGGTGAAATGTCTGTACATAGAGCAGGAAGCTACTACGGAGTGCCACATTCGACACTAGAATATAAAGTAAAGGAACGGCATTTAATGCGACCTAGAAAACGTGATCCCAAACCTCAACCCACTGATGGTGACAGTAAAACACAAACAGTACCAAGCAAACCTCAAGAACAAATACGTAATATAgcagataaaaataaaacaactatAAAACCACCTACCCAAAAATTTTCACCCACATCACCGAATGGTTTAAAAATGCCATTATTTGATCCAAGTATGACACCAATTGGATACAATCATCCACCATTCCCATTTTGGCCACATCCATCATTCCATCCAATGCAAATGCCATCTACCTCTGGGTTCCCACCCCATCCAGAATTATTTGCCTCGCAAATGATGCAAAGGATACAAGAACAAAATGTTGTGTCGTCACCGCCACATTCTAGTACTTCGTCCGGAGTACCAACTGCTGCACAACTAGCAGCCGCAGCGAATTCGGCAAGTACACGAGAAATCGCTGAATCACTGTATGATGGTACCGGTGCAAATGGTACTTTTTTAGATGGAATTATAAGGTCGAGCCTTGACATGGGTATACCTGGTTCCGGTAACAACAAACATGGCGAAGATAAATCATTAACGCCAGAGAATATGTCGAATAAGGCGCTGTTAGATCAATTATGCAGGAATAGTCGTCTAACACCGTTACCCAAGCCGAATTTAATAGATCCGCAAAGTTCTGGTGATGAAAGTAGTTCGTACAATTCAAAGCGTACACAAAGTCCAATAAACTTTTCACGTGATTATACTGATAATAAATTAGATAGTACGCCCGTAAACTTTTCAAGTGGGGGTCGTGGGGGGTCTGACATTGTTGAATTATCAAACGATTCAAATGAATCAACCACAACGCCATTACCAATTAGTGACCGAAAACGTAAACACTCGATTGATAATCATTCAGAAGAGGGCGAAGGTGAACGATCATCAGCGACACCAAGTCCTTCACCCACATCGAGAATTTATGTGAAACCACAATTTCAAGAAATAACAAAAccagaaaatttaaaacctgaaGTATTAGTACGATTTAATCGTTTACATGATACTGTCGGCAGTAGTTTATCCGATTTAAGTGAACAATCGTCGCATACGATGCTATCGGATCGAAATGGCATTCAAGAAACAGTTCCAGTTGTAGATGAAAGTGCCTCAATTGTGAAACAGGAAGCGGGGGGCCAAGACTGA
- Protein Sequence
- MSTVTGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERENHLVLSAAPVKIEDDETNVTTEEKELSGDEEEKEVEKVLQKPLLSMDDILRFSTLETPIAENLKHLLQKGGCKDTPESLEANNFAPYIQSLLLRASSGLISGHKSDQLMSAIKLTETVQKLLAESEQSDQHSDIVNNGCGTTERSLSRQSSTNSVIIRNDKILPPMKSGTPEVIDTETNDSQQQTSDSPSNVILKIPSFKPTTSKNGGDIFRQSPNVLDPQTTLNMTSPHHGSGSIGGGESNSPPAAILGKGIMSLKDVIAKSISQKFQQNDQMSLKMAAAVATSPVIDMDFNSIKRGRYTPPPSMGGGISVIKNHQDLHANRQFPQPPKPQNNNSSVNSQQQSQQMGGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPQPTDGDSKTQTVPSKPQEQIRNIADKNKTTIKPPTQKFSPTSPNGLKMPLFDPSMTPIGYNHPPFPFWPHPSFHPMQMPSTSGFPPHPELFASQMMQRIQEQNVVSSPPHSSTSSGVPTAAQLAAAANSASTREIAESLYDGTGANGTFLDGIIRSSLDMGIPGSGNNKHGEDKSLTPENMSNKALLDQLCRNSRLTPLPKPNLIDPQSSGDESSSYNSKRTQSPINFSRDYTDNKLDSTPVNFSSGGRGGSDIVELSNDSNESTTTPLPISDRKRKHSIDNHSEEGEGERSSATPSPSPTSRIYVKPQFQEITKPENLKPEVLVRFNRLHDTVGSSLSDLSEQSSHTMLSDRNGIQETVPVVDESASIVKQEAGGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -