Nfla013585.1
Basic Information
- Insect
- Nineta flava
- Gene Symbol
- retn
- Assembly
- GCA_963920215.1
- Location
- OY986042.1:113193328-113203501[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-20 5e-17 62.6 0.0 14 89 10 83 6 83 0.94 2 2 4.1 1.4e+04 -2.9 0.0 26 38 220 232 185 233 0.71
Sequence Information
- Coding Sequence
- atgtcaAGGAGAGAAAACCCGTTGAACGATCAAGACGgGACGCCTATAAATCGTTTACCCATAATGGCAAAATCAGTATTAGACctatatgaattatataatcTGGTAATTGCACGTGGTGGTCTGGTGGATGTAATCAATAAGAAGTTATGGCAGGAAATTATCAAAGGATTACATTTGCCATCGTCAATAACATCAGCTGCTTTTACGCTTCGCACACAATATATGAAATACTTGTACCCATATGAATGTGAAAAACGTCGTTTAAGTACGCCAGCTGAATTACAAGCTGCAATCGATGGAAATCGTCGTGAAGGCAGACGCAGCAGTTATGGTACATACAATGAAATGGTGCAACGCAGTCCAATACCCACATCACAGATGTCACCGCTGTCATTGGTAACACAACAGCAGAATATGATGTCACGTATTTCGAATGGTATACAAAATGGTGTACATCATCCTAGTCATCCGCCACCATTGGGTCAACCACCACTCGGTGGTCCCATACCCGGTATGGCACCATCCGAATTCGAAGCACGTATGGTTGAATATGTGAAACTCTTGAATAAAGAATTAAGGAATACAGCATCACCAACGGTTGCCCGACATGGTTCGTCGTCTCCGCCACTTAATGCAACATCACCATTAAATCCATTGGAAATGTCACGATTAAcattgtggaatttatataataataatccacCGCTACCTCCACCAATGTTGAATCCATCACCGGTGTTAGAACCACAACGTGAGGCATTAAATTTAGCTGATGTGAGTAATCTTccacacaataatattttatctacGCCCACAACGGCAATGAAACGCGAACCAGAGCATGAAGAACAACCACCAGCTAAACGAATGTTACAAGATGAGGATGAAAGTCCACCAAGTTCGCCGGCACCATCAGAATTATCACCATTAGAGCCACAGACACCAACTGTTAGTGGACTAAGTACAAGTATTAAAATCACCAACAGAggtgATTCGCAAAATGGTGATAACTCATTAGCTGTAAGCATGGAATTAAATGGTGTTATATATCAAGGTGTATTATTTGCTCAACAGTTGCAAAGTGGAAATCGTACTGCCCGGATCTCAAcgtga
- Protein Sequence
- MSRRENPLNDQDGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGTYNEMVQRSPIPTSQMSPLSLVTQQQNMMSRISNGIQNGVHHPSHPPPLGQPPLGGPIPGMAPSEFEARMVEYVKLLNKELRNTASPTVARHGSSSPPLNATSPLNPLEMSRLTLWNLYNNNPPLPPPMLNPSPVLEPQREALNLADVSNLPHNNILSTPTTAMKREPEHEEQPPAKRMLQDEDESPPSSPAPSELSPLEPQTPTVSGLSTSIKITNRGDSQNGDNSLAVSMELNGVIYQGVLFAQQLQSGNRTARIST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -